Tracking Human Gut Microbiome Changes Resulting from a Colonoscopy

[1]  Larry Smarr,et al.  Using machine learning to identify major shifts in human gut microbiome protein family abundance in disease , 2016, 2016 IEEE International Conference on Big Data (Big Data).

[2]  L. Drago,et al.  Persisting changes of intestinal microbiota after bowel lavage and colonoscopy , 2016, European journal of gastroenterology & hepatology.

[3]  Jarkko Salojärvi,et al.  Effects of bowel cleansing on the intestinal microbiota , 2014, Gut.

[4]  Eric J Alm,et al.  Host lifestyle affects human microbiota on daily timescales , 2014, Genome Biology.

[5]  Shibu Yooseph,et al.  Large memory high performance computing enables comparison across human gut microbiome of patients with autoimmune diseases and healthy subjects , 2013, XSEDE.

[6]  Florian Grimpen,et al.  Impact of Colonoscopy Bowel Preparation on Intestinal Microbiota , 2013, PloS one.

[7]  L. Smarr Quantifying your body: a how-to guide from a systems biology perspective. , 2012, Biotechnology journal.

[8]  Andreas Wilke,et al.  The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome , 2012, GigaScience.

[9]  Katherine H. Huang,et al.  A framework for human microbiome research , 2012, Nature.

[10]  Katherine H. Huang,et al.  Structure, Function and Diversity of the Healthy Human Microbiome , 2012, Nature.

[11]  William A. Walters,et al.  Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms , 2012, The ISME Journal.

[12]  Eric P. Nawrocki,et al.  An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea , 2011, The ISME Journal.

[13]  Tandy J. Warnow,et al.  SEPP: SATe -Enabled Phylogenetic Placement , 2011, Pacific Symposium on Biocomputing.

[14]  R. Knight,et al.  Moving pictures of the human microbiome , 2011, Genome Biology.

[15]  William A. Walters,et al.  QIIME allows analysis of high-throughput community sequencing data , 2010, Nature Methods.