Ms‐Based Metabolomics in Nutrition and Health Research

[1]  Hongying Zhong,et al.  Typing of unknown microorganisms based on quantitative analysis of fatty acids by mass spectrometry and hierarchical clustering. , 2011, Analytica chimica acta.

[2]  Karsten Suhre,et al.  MassTRIX: mass translator into pathways , 2008, Nucleic Acids Res..

[3]  Sebastiano Collino,et al.  Metabolic effects of dark chocolate consumption on energy, gut microbiota, and stress-related metabolism in free-living subjects. , 2009, Journal of proteome research.

[4]  R. Abagyan,et al.  METLIN: A Metabolite Mass Spectral Database , 2005, Therapeutic drug monitoring.

[5]  S. Primrose,et al.  Metabolomics and human nutrition , 2011, British Journal of Nutrition.

[6]  Royston Goodacre,et al.  Effective quenching processes for physiologically valid metabolite profiling of suspension cultured Mammalian cells. , 2009, Analytical chemistry.

[7]  C. Kenyon.  The genetics of ageing , 2010, Nature.

[8]  F. Sarkar,et al.  Metabolomics in cancer: a bench-to-bedside intersection. , 2012, Critical reviews in oncology/hematology.

[9]  Lorraine Brennan,et al.  Dietary intake patterns are reflected in metabolomic profiles: potential role in dietary assessment studies. , 2011, The American journal of clinical nutrition.

[10]  M. Urpi-Sardà,et al.  Methodological aspects for metabolome visualization and characterization: a metabolomic evaluation of the 24 h evolution of human urine after cocoa powder consumption. , 2010, Journal of pharmaceutical and biomedical analysis.

[11]  Yanli Wang,et al.  PubChem: Integrated Platform of Small Molecules and Biological Activities , 2008 .

[12]  D. Wishart,et al.  The human cerebrospinal fluid metabolome. , 2008, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

[13]  Choon Nam Ong,et al.  Metabonomics investigation of human urine after ingestion of green tea with gas chromatography/mass spectrometry, liquid chromatography/mass spectrometry and (1)H NMR spectroscopy. , 2008, Rapid communications in mass spectrometry : RCM.

[14]  Susumu Goto,et al.  KEGG: Kyoto Encyclopedia of Genes and Genomes , 2000, Nucleic Acids Res..

[15]  E. Ibáñez,et al.  MS-based analytical methodologies to characterize genetically modified crops. , 2011, Mass spectrometry reviews.

[16]  Richard A Dixon,et al.  Phytochemistry meets genome analysis, and beyond. , 2003, Phytochemistry.

[17]  C. Slupsky,et al.  Metabolomics and detection of colorectal cancer in humans: a systematic review. , 2010, Future oncology.

[18]  David S Wishart,et al.  Computational approaches to metabolomics. , 2010, Methods in molecular biology.

[19]  Fabian J Theis,et al.  The dynamic range of the human metabolome revealed by challenges , 2012, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[20]  John Milner,et al.  Nutrigenomics, proteomics, metabolomics, and the practice of dietetics. , 2006, Journal of the American Dietetic Association.

[21]  Oliver Fiehn,et al.  Mass-spectrometry-based metabolomics: limitations and recommendations for future progress with particular focus on nutrition research , 2009, Metabolomics.

[22]  A. Cifuentes,et al.  Is metabolomics reachable? Different purification strategies of human colon cancer cells provide different CE‐MS metabolite profiles , 2011, Electrophoresis.

[23]  S. Devkota,et al.  A high protein moderate carbohydrate diet fed at discrete meals reduces early progression of N-methyl-N-nitrosourea-induced breast tumorigenesis in rats , 2010, Nutrition & metabolism.

[24]  Oliver Fiehn,et al.  A comprehensive urinary metabolomic approach for identifying kidney cancerr. , 2007, Analytical biochemistry.

[25]  M. Čuperlović-Culf,et al.  Cell culture metabolomics: applications and future directions. , 2010, Drug discovery today.

[26]  I. Rusyn,et al.  Towards high-throughput metabolomics using ultrahigh-field Fourier transform ion cyclotron resonance mass spectrometry , 2008, Metabolomics.

[27]  S. Ross.  Evidence for the relationship between diet and cancer. , 2010, Experimental oncology.

[28]  Lorraine Brennan,et al.  Session 2: Personalised nutrition Metabolomic applications in nutritional research , 2008, Proceedings of the Nutrition Society.

[29]  Matej Oresic,et al.  MZmine: toolbox for processing and visualization of mass spectrometry based molecular profile data , 2006, Bioinform..

[30]  Werner Welthagen,et al.  Statistical methods for comparing comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry results: metabolomic analysis of mouse tissue extracts. , 2005, Journal of chromatography. A.

[31]  Alexander Raskind,et al.  Statistical methods in metabolomics. , 2012, Methods in molecular biology.

[32]  David S. Wishart,et al.  HMDB: a knowledgebase for the human metabolome , 2008, Nucleic Acids Res..

[33]  V. Go,et al.  Diet, nutrition, and cancer prevention: the postgenomic era. , 2003, The Journal of nutrition.

[34]  J. Alverdy,et al.  Diet creates metabolic niches in the "immature gut" that shape microbial communities. , 2011, Nutricion hospitalaria.

[35]  Xiaoying Zheng,et al.  Metabonomic study on women of reproductive age treated with nutritional intervention: screening potential biomarkers related to neural tube defects occurrence. , 2011, Biomedical chromatography : BMC.

[36]  R. Gerszten,et al.  Metabolomics and cardiovascular biomarker discovery. , 2012, Clinical chemistry.

[37]  Henrik Antti,et al.  Predictive metabolomics evaluation of nutrition-modulated metabolic stress responses in human blood serum during the early recovery phase of strenuous physical exercise. , 2009, Journal of proteome research.

[38]  Dean P. Jones,et al.  High-performance metabolic profiling with dual chromatography-Fourier-transform mass spectrometry (DC-FTMS) for study of the exposome , 2011, Metabolomics.

[39]  H. Kamp,et al.  Nutritional impact on the plasma metabolome of rats. , 2011, Toxicology letters.

[40]  Wanchang Lin,et al.  Original Article , 1995 .

[41]  Qian Yang,et al.  Identification of noninvasive biomarkers for alcohol-induced liver disease using urinary metabolomics and the Ppara-null mouse. , 2010, Journal of proteome research.

[42]  B. Hammock,et al.  Mass spectrometry-based metabolomics. , 2007, Mass spectrometry reviews.

[43]  T I A Sørensen,et al.  Randomized, multi-center trial of two hypo-energetic diets in obese subjects: high- versus low-fat content , 2006, International Journal of Obesity.

[44]  S. Sang,et al.  Biotransformation of green tea polyphenols and the biological activities of those metabolites. , 2007, Molecular pharmaceutics.

[45]  P. Murphy,et al.  Greater apparent absorption of flavonoids is associated with lesser human fecal flavonoid disappearance rates. , 2010, Journal of agricultural and food chemistry.

[46]  Augustin Scalbert,et al.  The complex links between dietary phytochemicals and human health deciphered by metabolomics. , 2009, Molecular nutrition & food research.

[47]  Oliver Fiehn,et al.  Metabolomic database annotations via query of elemental compositions: Mass accuracy is insufficient even at less than 1 ppm , 2006, BMC Bioinformatics.

[48]  M. Portero-Otín,et al.  Multicompartmental LC-Q-TOF-based metabonomics as an exploratory tool to identify novel pathways affected by polyphenol-rich diets in mice. , 2011, Journal of proteome research.

[49]  L. Barberini,et al.  Metabolomics in paediatric respiratory diseases and bronchiolitis , 2011, The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians.

[50]  G Madalinski,et al.  Fourier transform mass spectrometry for metabolome analysis. , 2010, The Analyst.

[51]  S. Carr,et al.  Metabolic Signatures of Exercise in Human Plasma , 2010, Science Translational Medicine.

[52]  T. Ideker,et al.  A new approach to decoding life: systems biology. , 2001, Annual review of genomics and human genetics.

[53]  T. Seyfried,et al.  Cancer as a metabolic disease , 2010, Nutrition & metabolism.

[54]  J. German,et al.  Metabolomics for assessment of nutritional status , 2009, Current opinion in clinical nutrition and metabolic care.

[55]  J. German,et al.  Metabolomics in practice: emerging knowledge to guide future dietetic advice toward individualized health. , 2005, Journal of the American Dietetic Association.

[56]  J Bruce German,et al.  Analytical metabolomics: nutritional opportunities for personalized health. , 2011, The Journal of nutritional biochemistry.

[57]  Robert D Hall,et al.  Plant metabolomics and its potential application for human nutrition. , 2007, Physiologia plantarum.

[58]  E. Ibáñez,et al.  Foodomics: MS-based strategies in modern food science and nutrition. , 2012, Mass spectrometry reviews.

[59]  D. Wishart.  Metabolomics: applications to food science and nutrition research , 2008 .

[60]  C. Barbas,et al.  Metabolomic assessment with CE‐MS of the nutraceutical effect of Cystoseira spp extracts in an animal model , 2011, Electrophoresis.

[61]  S. Kochhar,et al.  Nutritional metabonomics: an approach to promote personalized health and wellness. , 2011, Chimia.

[62]  Xiaohui Chen,et al.  Metabonomics study of the protective effects of green tea polyphenols on aging rats induced by d-galactose. , 2011, Journal of pharmaceutical and biomedical analysis.

[63]  Ben van Ommen,et al.  An antiinflammatory dietary mix modulates inflammation and oxidative and metabolic stress in overweight men: a nutrigenomics approach. , 2010, The American journal of clinical nutrition.

[64]  Martin Scholz,et al.  Setup and Annotation of Metabolomic Experiments by Integrating Biological and Mass Spectrometric Metadata , 2005, DILS.

[65]  Julian L. Griffin,et al.  Metabolic profiles of cancer cells , 2004, Nature Reviews Cancer.

[66]  Philippe Rocca-Serra,et al.  Challenges of molecular nutrition research 6: the nutritional phenotype database to store, share and evaluate nutritional systems biology studies , 2010, Genes & Nutrition.

[67]  R. Draijer,et al.  Impact of short-term intake of red wine and grape polyphenol extract on the human metabolome. , 2012, Journal of agricultural and food chemistry.

[68]  L. B. Larsen,et al.  Impact of high-fat and high-carbohydrate diets on liver metabolism studied in a rat model with a systems biology approach. , 2012, Journal of agricultural and food chemistry.

[69]  J. Mathers,et al.  Use of mass spectrometry fingerprinting to identify urinary metabolites after consumption of specific foods. , 2011, The American journal of clinical nutrition.

[70]  J. Mathers,et al.  Proline betaine and its biotransformation products in fasting urine samples are potential biomarkers of habitual citrus fruit consumption. , 2011, The British journal of nutrition.

[71]  B. Lake,et al.  Identification of human urinary biomarkers of cruciferous vegetable consumption by metabonomic profiling. , 2011, Journal of proteome research.

[72]  Jonas Wittwer,et al.  Nutrigenomics in human intervention studies: current status, lessons learned and future perspectives. , 2011, Molecular nutrition & food research.

[73]  N. Kelleher,et al.  Characterization of proteomic and metabolomic responses to dietary factors and supplements. , 2007, The Journal of nutrition.

[74]  M. Taylor,et al.  Assessing the potential for unintended effects in genetically modified potatoes perturbed in metabolic and developmental processes. Targeted analysis of key nutrients and anti-nutrients , 2006, Transgenic Research.

[75]  R. Abagyan,et al.  XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. , 2006, Analytical chemistry.

[76]  T. Peregrin.  The new frontier of nutrition science: nutrigenomics. , 2001, Journal of the American Dietetic Association.

[77]  Masaru Tomita,et al.  Bioinformatics Tools for Mass Spectroscopy-Based Metabolomic Data Processing and Analysis , 2012, Current bioinformatics.

[78]  Thomas Noll,et al.  Fast filtration for metabolome sampling of suspended animal cells , 2011, Biotechnology Letters.

[79]  A. Cifuentes.  Food analysis and foodomics. , 2009, Journal of chromatography. A.

[80]  W. R. Wikoff,et al.  Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites , 2009, Proceedings of the National Academy of Sciences.

[81]  R. Draijer,et al.  The metabolic fate of red wine and grape juice polyphenols in humans assessed by metabolomics. , 2009, Molecular nutrition & food research.

[82]  P. Prenzler,et al.  Recent and potential developments in the analysis of urine: a review. , 2011, Analytica chimica acta.

[83]  D. Rowan,et al.  Metabolomics for measuring phytochemicals, and assessing human and animal responses to phytochemicals, in food science. , 2012, Molecular nutrition & food research.

[84]  G. Theodoridis,et al.  Sample preparation prior to the LC-MS-based metabolomics/metabonomics of blood-derived samples. , 2011, Bioanalysis.

[85]  R. D. Hall,et al.  A non-directed approach to the differential analysis of multiple LC–MS-derived metabolic profiles , 2005, Metabolomics.

[86]  Cristina Andrés-Lacueva,et al.  Metabolomics unveils urinary changes in subjects with metabolic syndrome following 12-week nut consumption. , 2011, Journal of proteome research.

[87]  A. Cifuentes,et al.  CE/LC‐MS multiplatform for broad metabolomic analysis of dietary polyphenols effect on colon cancer cells proliferation , 2012, Electrophoresis.

[88]  M. Walsh,et al.  METABOLOMICS IN HUMAN NUTRITION: OPPORTUNITIES AND CHALLENGES , 2005 .

[89]  Daniel Raftery,et al.  Comparing and combining NMR spectroscopy and mass spectrometry in metabolomics , 2007, Analytical and bioanalytical chemistry.

[90]  T. Moritz,et al.  Physical fitness level is reflected by alterations in the human plasma metabolome. , 2012, Molecular Biosystems.

[91]  E. Etxeberria,et al.  Metabolomic analysis in food science: a review , 2009 .

[92]  M. Orešič,et al.  Metabolomics, a novel tool for studies of nutrition, metabolism and lipid dysfunction. , 2009, Nutrition, metabolism, and cardiovascular diseases : NMCD.

[93]  S. Engelsen,et al.  LC–MS metabolomics top-down approach reveals new exposure and effect biomarkers of apple and apple-pectin intake , 2012, Metabolomics.

[94]  Antonio Segura-Carretero,et al.  Global Foodomics strategy to investigate the health benefits of dietary constituents. , 2012, Journal of chromatography. A.

[95]  Dean P. Jones,et al.  Endoplasmic reticulum stress in nonalcoholic fatty liver disease. , 2012, Annual review of nutrition.

[96]  J. Brockman,et al.  Dietary fish oil alters the lysophospholipid metabolomic profile and decreases urinary 11-dehydro thromboxane B₂ concentration in healthy Beagles. , 2011, Veterinary immunology and immunopathology.

[97]  C. Andrés-Lacueva,et al.  Nutrimetabolomic strategies to develop new biomarkers of intake and health effects. , 2012, Journal of agricultural and food chemistry.

[98]  R. Goodacre,et al.  Integration of metabolomics in heart disease and diabetes research: current achievements and future outlook. , 2011, Bioanalysis.

[99]  A. Smilde,et al.  Large-scale human metabolomics studies: a strategy for data (pre-) processing and validation. , 2006, Analytical chemistry.

[100]  Gaëlle Favé,et al.  Measurement of dietary exposure: a challenging problem which may be overcome thanks to metabolomics? , 2009, Genes & Nutrition.