SHM1: A multicopy suppressor of a temperature‐sensitive null mutation in the HMG1‐like abf2 gene

HM, an HMG1‐like mitochondrial DNA‐binding protein, is required for maintenance of the yeast mitochondrial genome when cells are grown in glucose. To better understand the role of HM in mitochondria, we have isolated several multicopy suppressors of the temperature‐sensitive defect associated with an abf2 null mutation (lacking HM protein). One of these suppressors, SHM1, has been characterized at the molecular level and is described herein. SHM1 encodes a protein (SHM1p) that shares sequence similarity to a family of mitochondrial carrier proteins. On glycerol medium, where mitochondrial function is required for growth, shm1 deletion mutants are able to grow, whereas shm1 abf2 double mutants are severely inhibited. These results suggest that SHM1p plays an accessory role to HM in the mitochondrion. The GenBank Accession Number for the SHM1 sequence is U08352.

[1]  F. Foury,et al.  PIF1: a DNA helicase in yeast mitochondria. , 1991, The EMBO journal.

[2]  D. Rickwood,et al.  Evidence for protected regions of DNA in the mitochondrial nucleoid of Saccharomyces cerevisiae , 1981 .

[3]  T. Megraw,et al.  Functional complementarity between the HMG1-like yeast mitochondrial histone HM and the bacterial histone-like protein HU. , 1993, The Journal of biological chemistry.

[4]  F. Foury,et al.  A PIF‐dependent recombinogenic signal in the mitochondrial DNA of yeast , 1985, The EMBO journal.

[5]  J. Diffley,et al.  DNA binding properties of an HMG1-related protein from yeast mitochondria. , 1992, The Journal of biological chemistry.

[6]  F. Foury,et al.  pif mutation blocks recombination between mitochondrial rho+ and rho- genomes having tandemly arrayed repeat units in Saccharomyces cerevisiae. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[7]  D. Brutlag,et al.  Nicking-closing enzyme assembles nucleosome-like structures in vitro. , 1979, Proceedings of the National Academy of Sciences of the United States of America.

[8]  D. Montgomery,et al.  Sequences required for delivery and localization of the ADP/ATP translocator to the mitochondrial inner membrane , 1986, Molecular and cellular biology.

[9]  J. Diffley,et al.  A close relative of the nuclear, chromosomal high-mobility group protein HMG1 in yeast mitochondria. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[10]  M. Jacquet,et al.  Yeast Sequencing , 2022 .

[11]  D. Nelson,et al.  Structure-function relationships in the mitochondrial carrier family , 1995 .

[12]  M. M. Nass Mitochondrial DNA. I. Intramitochondrial distribution and structural relations of single- and double-length circular DNA. , 1969, Journal of molecular biology.

[13]  J. Walker,et al.  Sequence of the bovine mitochondrial phosphate carrier protein: structural relationship to ADP/ATP translocase and the brown fat mitochondria uncoupling protein. , 1987, The EMBO journal.

[14]  M. Yaniv,et al.  E. coli DNA binding protein HU forms nucleosome-like structure with circular double-stranded DNA , 1979, Cell.

[15]  D. Pettijohn,et al.  Interaction of the Escherichia coli HU protein with DNA. Evidence for formation of nucleosome-like structures with altered DNA helical pitch. , 1986, Journal of molecular biology.

[16]  M. McPherson,et al.  A compact form of rat liver mitochondrial DNA stabilized by bound proteins. , 1979, The Journal of biological chemistry.

[17]  M. Klingenberg,et al.  Solute carriers involved in energy transfer of mitochondria form a homologous protein family , 1987, FEBS letters.

[18]  J. Griffith,et al.  Association of a protein structure of probable membrane derivation with HeLa cell mitochondrial DNA near its origin of replication. , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[19]  T. Megraw,et al.  Essential role of the HMG domain in the function of yeast mitochondrial histone HM: functional complementation of HM by the nuclear nonhistone protein NHP6A. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[20]  F. Foury,et al.  Cloning and sequencing of the PIF gene involved in repair and recombination of yeast mitochondrial DNA. , 1987, The EMBO journal.

[21]  F. Foury,et al.  A single‐stranded DNA binding protein required for mitochondrial DNA replication in S. cerevisiae is homologous to E. coli SSB. , 1992, The EMBO journal.

[22]  W. Firshein Role of the DNA/membrane complex in prokaryotic DNA replication. , 1989, Annual review of microbiology.

[23]  D. A. Clayton,et al.  A human mitochondrial transcriptional activator can functionally replace a yeast mitochondrial HMG-box protein both in vivo and in vitro , 1993, Molecular and cellular biology.

[24]  P. Perlman,et al.  An enzyme in yeast mitochondria that catalyzes a step in branched‐chain amino acid biosynthesis also functions in mitochondrial DNA stability. , 1995, The EMBO journal.

[25]  J. Walker,et al.  Two bovine genes for mitochondrial ADP/ATP translocase expressed differences in various tissues. , 1989, Biochemistry.

[26]  T. A. Link,et al.  The uncoupling protein from brown fat mitochondria is related to the mitochondrial ADP/ATP carrier. Analysis of sequence homologies and of folding of the protein in the membrane. , 1985, The EMBO journal.

[27]  R. Sikorski,et al.  A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. , 1989, Genetics.

[28]  M. Saraste,et al.  Internal sequence repeats and the path of polypeptide in mitochondrial ADP/ATP translocase , 1982, FEBS letters.

[29]  C. Jacq,et al.  Characterization of a histone-like protein extracted from yeast mitochondria. , 1979, Proceedings of the National Academy of Sciences of the United States of America.

[30]  Gerald R. Fink,et al.  Guide to yeast genetics and molecular biology , 1993 .

[31]  J. Weissenbach,et al.  Complete cDNA-derived amino acid sequence of rat brown fat uncoupling protein. , 1986, The Journal of biological chemistry.

[32]  W. Sebald,et al.  Nucleotide sequence of the cloned mRNA and gene of the ADP/ATP carrier from Neurospora crassa. , 1984, The EMBO journal.

[33]  T. Megraw,et al.  The mitochondrial histone HM: an evolutionary link between bacterial HU and nuclear HMG1 proteins. , 1994, Biochimie.

[34]  K. O'Malley,et al.  Selection of the nuclear gene for the mitochondrial adenine nucleotide translocator by genetic complementation of the op1 mutation in yeast. , 1982, The Journal of biological chemistry.