Genetic Variations in XRCC4 (rs1805377) and ATF6 (rs2070150) are not Associated with Hepatocellular Carcinoma in Thai Patients with Hepatitis B Virus Infection.

The liver is one of the most common sites of cancer in the world, hepatocellular carcinoma (HCC) predominating. Chronic hepatitis B virus infection (CHB) is considered as an important potential risk factors for HCC. Different people have diverse responses to HBV infection regarding the likelihood of HCC development, and host factors such as single nucleotide polymorphisms (SNPs) might account for this. The present study was conducted to evaluate any association between SNP frequencies in two genes, XRCC4 (rs1805377) and ATF6 (rs2070150), and the risk of CHB and HCC development in Thai patients. The study covered 369 subjects including 121 HCC patients, 141 with chronic hepatitis B virus infection (CHB) and 107 healthy controls. With TaqMan real-time PCR, the results showed that no significant association between XRCC4 (rs1805377) and ATF6 (rs2070150) and risk of HCC in the Thai population. From this first study of the 2 polymorphisms and HCC in Thailand it can concluded that rs1805377 and rs2070150 polymorphisms may not be applicable as genetic markers in the Thai population for HCC assessment.

[1]  Yibing Chen,et al.  SNP rs2057482 in HIF1A gene predicts clinical outcome of aggressive hepatocellular carcinoma patients after surgery , 2015, Scientific Reports.

[2]  S. Zhang,et al.  Significance of genetic variants in DLC1 and their association with hepatocellular carcinoma , 2015, Molecular medicine reports.

[3]  S. Qi,et al.  Association of LIG4 and XRCC4 gene polymorphisms with the risk of human glioma in a Chinese population. , 2015, International journal of clinical and experimental pathology.

[4]  N. Rothman,et al.  Polymorphisms in DNA repair genes, hair dye use, and the risk of non-Hodgkin lymphoma , 2014, Cancer Causes & Control.

[5]  Y. Liu,et al.  A missense polymorphism in ATF6 gene is associated with susceptibility to hepatocellular carcinoma probably by altering ATF6 level , 2014, International journal of cancer.

[6]  G. Cao,et al.  Interaction of signal transducer and activator of transcription 3 polymorphisms with hepatitis B virus mutations in hepatocellular carcinoma , 2013, Hepatology.

[7]  P. Tangkijvanich,et al.  The KIF1B (rs17401966) single nucleotide polymorphism is not associated with the development of HBV-related hepatocellular carcinoma in Thai patients. , 2013, Asian Pacific journal of cancer prevention : APJCP.

[8]  Lin Zhao,et al.  Genetic polymorphisms of DNA double-strand break repair pathway genes and glioma susceptibility , 2013, BMC Cancer.

[9]  H. M. Reis,et al.  Pathogenic mechanisms in HBV- and HCV-associated hepatocellular carcinoma , 2013, Nature Reviews Cancer.

[10]  Qiang Ding,et al.  Genetic variants in STAT4 and HLA-DQ genes confer risk of hepatitis B virus–related hepatocellular carcinoma , 2012, Nature Genetics.

[11]  G. Sethi,et al.  Potential role of signal transducer and activator of transcription (STAT)3 signaling pathway in inflammation, survival, proliferation and invasion of hepatocellular carcinoma. , 2013, Biochimica et biophysica acta.

[12]  H. Chung,et al.  Annals of the New York Academy of Sciences Unfolded Protein Response to Autophagy as a Promising Druggable Target for Anticancer Therapy , 2022 .

[13]  E. Shin,et al.  Polymorphisms of DNA repair genes in Korean hepatocellular carcinoma patients with chronic hepatitis B: possible implications on survival. , 2012, Journal of hepatology.

[14]  Pål Sætrom,et al.  Single Nucleotide Polymorphisms Can Create Alternative Polyadenylation Signals and Affect Gene Expression through Loss of MicroRNA-Regulation , 2012, PLoS Comput. Biol..

[15]  R. Mandal,et al.  Do polymorphisms in XRCC4 influence prostate cancer susceptibility in North Indian population? , 2011, Biomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals.

[16]  F. Zoulim,et al.  Hepatitis B virus induced hepatocellular carcinoma. , 2009, Cancer letters.

[17]  H. Hsu,et al.  Lung cancer susceptibility and prognosis associated with polymorphisms in the nonhomologous end‐joining pathway genes , 2009, Cancer.

[18]  T. Liang Hepatitis B: The virus and disease , 2009, Hepatology.

[19]  Jin-Lin Hou,et al.  Hepatocellular carcinoma in the Asia pacific region , 2009, Journal of gastroenterology and hepatology.

[20]  P. Walter,et al.  The unfolded protein response during prostate cancer development , 2009, Cancer and Metastasis Reviews.

[21]  Hushan Yang,et al.  Genetic Susceptibility to Renal Cell Carcinoma: The Role of DNA Double-Strand Break Repair Pathway , 2008, Cancer Epidemiology Biomarkers & Prevention.

[22]  Da-Tian Bau,et al.  A novel single nucleotide polymorphism in ERCC6 gene is associated with oral cancer susceptibility in Taiwanese patients. , 2008, Oral oncology.

[23]  M. Tsai,et al.  Association of XRCC4 codon 247 polymorphism with oral cancer susceptibility in Taiwan. , 2008, Anticancer research.

[24]  Debra Silverman,et al.  Evaluation of genetic variation in the double-strand break repair pathway and bladder cancer risk. , 2007, Carcinogenesis.

[25]  P. Galle,et al.  Hepatitis viruses: live and let die , 2007, Liver international : official journal of the International Association for the Study of the Liver.

[26]  C. Koumenis,et al.  The PERK/eIF2α/ATF4 module of the UPR in hypoxia resistance and tumor growth , 2006 .

[27]  H. Blum,et al.  Hepatocellular carcinoma: therapy and prevention. , 2005, World journal of gastroenterology.

[28]  D. Ganem,et al.  Hepatitis B virus infection--natural history and clinical consequences. , 2004, The New England journal of medicine.

[29]  S. Kaneko,et al.  Mechanisms of viral hepatitis induced liver injury. , 2003, Current molecular medicine.

[30]  Chen-Yang Shen,et al.  Breast cancer risk associated with genotypic polymorphism of the nonhomologous end-joining genes: a multigenic study on cancer susceptibility. , 2003, Cancer research.

[31]  K. Mori,et al.  Activation of the ATF6, XBP1 and grp78 genes in human hepatocellular carcinoma: a possible involvement of the ER stress pathway in hepatocarcinogenesis. , 2003, Journal of Hepatology.

[32]  Chien-Jen Chen,et al.  Interaction of hepatitis B virus, chemical carcinogen, and genetic susceptibility: Multistage hepatocarcinogenesis with multifactorial etiology , 2002, Hepatology.