Large scale MALDI-TOF MS based taxa identification to identify novel pigment producers in a marine bacterial culture collection

[1]  B. Vanhoorne,et al.  World Register of Marine Species , 2013 .

[2]  J. Klimentova,et al.  Evaluation of sample preparation methods for MALDI‐TOF MS identification of highly dangerous bacteria , 2012, Letters in applied microbiology.

[3]  C. Neut,et al.  Chemical extraction versus direct smear for MALDI-TOF mass spectrometry identification of anaerobic bacteria. , 2012, Anaerobe.

[4]  Jonathan L. Klassen,et al.  Microbial Strain Prioritization Using Metabolomics Tools for the Discovery of Natural Products , 2012, Analytical chemistry.

[5]  T. Macek,et al.  Whole-cell MALDI-TOF: Rapid screening method in environmental microbiology , 2012 .

[6]  Marius Dybwad,et al.  Characterization of Airborne Bacteria at an Underground Subway Station , 2012, Applied and Environmental Microbiology.

[7]  P. Bruheim,et al.  Two-dimensional LC-MS fractioning and cross-matching of mass spectrometric data for rational identification of bioactive compounds in crude extracts. , 2011, Journal of separation science.

[8]  P. de Vos,et al.  Evaluation of MALDI-TOF MS as a tool for high-throughput dereplication. , 2011, Journal of microbiological methods.

[9]  M. Millar,et al.  Improved Performance of Bacterium and Yeast Identification by a Commercial Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry System in the Clinical Microbiology Laboratory , 2011, Journal of Clinical Microbiology.

[10]  S. Takaichi.  Carotenoids in Algae: Distributions, Biosyntheses and Functions , 2011, Marine drugs.

[11]  L. Gram,et al.  Bioactivity, Chemical Profiling, and 16S rRNA-Based Phylogeny of Pseudoalteromonas Strains Collected on a Global Research Cruise , 2011, Marine Biotechnology.

[12]  E. Moore,et al.  Applications of whole-cell matrix-assisted laser-desorption/ionization time-of-flight mass spectrometry in systematic microbiology. , 2011, Systematic and applied microbiology.

[13]  J. M. Gallardo,et al.  Comparative analysis of protein extraction methods for the identification of seafood-borne pathogenic and spoilage bacteria by MALDI-TOF mass spectrometry , 2010 .

[14]  G Greub,et al.  Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry as an Alternative to 16S rRNA Gene Sequencing for Identification of Difficult-To-Identify Bacterial Strains , 2010, Journal of Clinical Microbiology.

[15]  Y. Glupczynski,et al.  Evaluation of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Nocardia Species , 2010, Journal of Clinical Microbiology.

[16]  F. Rezzonico,et al.  Application of Whole-Cell Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Rapid Identification and Clustering Analysis of Pantoea Species , 2010, Applied and Environmental Microbiology.

[17]  J. M. Gallardo,et al.  Species differentiation of seafood spoilage and pathogenic gram-negative bacteria by MALDI-TOF mass fingerprinting. , 2010, Journal of proteome research.

[18]  P. Bruheim,et al.  Isolation and characterization of marine pigmented bacteria from Norwegian coastal waters and screening for carotenoids with UVA-blue light absorbing properties , 2010, The Journal of Microbiology.

[19]  E. Claas,et al.  High-Throughput Identification of Bacteria and Yeast by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry in Conventional Medical Microbiology Laboratories , 2010, Journal of Clinical Microbiology.

[20]  M. Kostrzewa,et al.  Identification of a Variety of Staphylococcus Species by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry , 2009, Journal of Clinical Microbiology.

[21]  M. Kostrzewa,et al.  Identification of a variety of Staphylococcus species by MALDI-TOF mass spectrometry , 2009 .

[22]  M. Erhard,et al.  Identification of Gram-positive anaerobic cocci by MALDI-TOF mass spectrometry. , 2009, Systematic and applied microbiology.

[23]  A. Hoerauf,et al.  Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Fast and Reliable Identification of Clinical Yeast Isolates , 2009, Journal of Clinical Microbiology.

[24]  P. Bruheim,et al.  Candicidin Biosynthesis Gene Cluster Is Widely Distributed among Streptomyces spp. Isolated from the Sediments and the Neuston Layer of the Trondheim Fjord, Norway , 2009, Applied and Environmental Microbiology.

[25]  M. Erhard,et al.  Rapid Classification and Identification of Salmonellae at the Species and Subspecies Levels by Whole-Cell Matrix-Assisted Laser Desorption Ionization – Time of Flight Mass Spectrometry † , 2008 .

[26]  R. Reinhardt,et al.  Classification and Identification of Bacteria by Mass Spectrometry and Computational Analysis , 2008, PloS one.

[27]  H. Tamura,et al.  Environmental distribution and novel high-throughput screening of APEO-degrading bacteria using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-MS) , 2008 .

[28]  P. Dorrestein,et al.  Biosynthetic origin of natural products isolated from marine microorganism–invertebrate assemblages , 2008, Proceedings of the National Academy of Sciences.

[29]  Sung‐Hyun Yang,et al.  Flagellimonas eckloniae gen. nov., sp. nov., a mesophilic marine bacterium of the family Flavobacteriaceae, isolated from the rhizosphere of Ecklonia kurome. , 2007, International journal of systematic and evolutionary microbiology.

[30]  Jørn Smedsgaard,et al.  Phenotypic taxonomy and metabolite profiling in microbial drug discovery. , 2005, Natural product reports.

[31]  J. Smedsgaard,et al.  Automated and Unbiased Image Analyses as Tools in Phenotypic Classification of Small-Spored Alternaria spp. , 2005, Phytopathology.

[32]  U. Szewzyk,et al.  Rapid screening and dereplication of bacterial isolates from marine sponges of the Sula Ridge by Intact-Cell-MALDI-TOF mass spectrometry (ICM-MS) , 2005, Applied Microbiology and Biotechnology.

[33]  S. Tringe,et al.  Comparative Metagenomics of Microbial Communities , 2004, Science.

[34]  Jens Michael Carstensen,et al.  Density-based retrieval from high-similarity image databases , 2004, Pattern Recognit..

[35]  Jens Michael Carstensen,et al.  Visual clone identification of Penicillium commune isolates. , 2003, Journal of microbiological methods.

[36]  N. Durán,et al.  Production, extraction and purificationof violacein: an antibiotic pigment producedby Chromobacterium violaceum , 1998 .

[37]  H. Reichenbach,et al.  Flexirubin-type pigments in Flavobacterium , 1980, Archives of Microbiology.

[38]  S. Lewis,et al.  Prodigiosin-Producing Bacteria from Marine Sources , 1964, Applied microbiology.

[39]  F. Tomita,et al.  ISOLATION AND CHARACTERIZATION OF FLAVONOID COMPOUND FROM FERONIA LIMONIA , 2015 .

[40]  T. Maier,et al.  Microorganism Identification Based On MALDI-TOF-MS Fingerprints , 2011 .

[41]  J. Banoub.  Detection of Biological Agents for the Prevention of Bioterrorism , 2011 .

[42]  M. Ringnér,et al.  Detection and identification of protein isoforms using cluster analysis of MALDI-MS mass spectra. , 2006, Journal of proteome research.