Voronoi Diagram of Polygonal Chains under the Discrete FRéChet Distance

Polygonal chains are fundamental objects in many applications like pattern recognition and protein structure alignment. A well-known measure to characterize the similarity of two polygonal chains is the (continuous/discrete) Frechet distance. In this paper, for the first time, we consider the Voronoi diagram of polygonal chains in d-dimension under the discrete Frechet distance. Given a set of n polygonal chains in d-dimension, each with at most k vertices, we prove fundamental properties of such a Voronoi diagram . Our main results are summarized as follows. • The combinatorial complexity of is at most O(ndk+∊). • The combinatorial complexity of is at least Ω(ndk) for dimension d = 1, 2; and Ω(nd(k-1)+2) for dimension d > 2.

[1]  Micha Sharir,et al.  Computing envelopes in four dimensions with applications , 1994, SCG '94.

[2]  M. Fréchet Sur quelques points du calcul fonctionnel , 1906 .

[3]  M. Godau On the complexity of measuring the similarity between geometric objects in higher dimensions , 1999 .

[4]  Michael Ian Shamos,et al.  Computational geometry: an introduction , 1985 .

[5]  Binhai Zhu,et al.  Protein Structure-Structure Alignment with Discrete Fr'echet Distance , 2007, APBC.

[6]  Carola Wenk,et al.  Shape matching in higher dimensions , 2003 .

[7]  Kevin Buchin,et al.  Computing the Fréchet distance between simple polygons in polynomial time , 2006, SCG '06.

[8]  Piotr Indyk,et al.  Approximate nearest neighbor algorithms for Frechet distance via product metrics , 2002, SCG '02.

[9]  Binhai Zhu On the Complexity of Protein Local Structure Alignment Under the Discrete Fréchet Distance , 2007, J. Comput. Biol..

[10]  Helmut Alt,et al.  Matching Polygonal Curves with Respect to the Fréchet Distance , 2001, STACS.

[11]  Raimund Seidel,et al.  Voronoi diagrams and arrangements , 1986, Discret. Comput. Geom..

[12]  Nabil H. Mustafa,et al.  Near-Linear Time Approximation Algorithms for Curve Simplification , 2005, Algorithmica.

[13]  Helmut Alt,et al.  Measuring the resemblance of polygonal curves , 1992, SCG '92.

[14]  Helmut Alt,et al.  Computing the Fréchet distance between two polygonal curves , 1995, Int. J. Comput. Geom. Appl..

[15]  Micha Sharir Almost tight upper bounds for lower envelopes in higher dimensions , 1994, Discret. Comput. Geom..

[16]  Jirí Matousek,et al.  The distance trisector curve , 2006, STOC '06.

[17]  Binhai Zhu,et al.  Protein Structure-structure Alignment with Discrete FrÉchet Distance , 2008, J. Bioinform. Comput. Biol..

[18]  Richard Nock,et al.  On Bregman Voronoi diagrams , 2007, SODA '07.