Reconsideration of the efficiency of energy transduction in Paracoccus denitrificans during growth under a variety of culture conditions

Abstract1. Theoretical overall P/2e- ratios were calculated for growth of Paracoccus denitrificans under a variety of culture conditions on the basis of a growth model and recently published schemes of electron transport and associated proton translocation. 2. Experimental overall P/2e- ratios were calculated, using the specific rate of ATP synthesis determined in cultures grown under aerobic carbon source-limited conditions. 3. The experimental P/2e- was equal to the theoretical P/2e- for aerobic sulphate-limited growth with gluconate or succinate as carbon source, on the assumption that site 1 phosphorylation was completely absent. 4. The experimental and the theoretical P/2e- were similar for growth on nitrate as terminal electron acceptor and gluconate, mannitol or succinate as carbon source, on the assumption that nitrate enters the cell via the electroneutral nitrate-nitrite antiport system. 5. The experimental and theoretical P/2e- were similar for growth on nitrite as terminal electron acceptor and mannitol or succinate as carbon source. 6. The experimental P/2e- was substantially lower than the theoretical P/2e- for aerobic growth with nitrate as nitrogen source and gluconate or mannitol as carbon source. The amount of energy needed for assimilative reduction of nitrate to ammonia was calculated from this difference.

[1]  I. Koike,et al.  Energy yield of denitrification: an estimate from growth yield in continuous cultures of Pseudomonas denitrificans under nitrate-, nitrite- and oxide-limited conditions. , 1975, Journal of general microbiology.

[2]  D. Kell,et al.  Estimation with an ion-selective electrode of the membrane potential in cells of Paracoccus denitrificans from the uptake of the butyltriphenylphosphonium cation during aerobic and anaerobic respiration. , 1981, The Biochemical journal.

[3]  Reassessment of pathways of electron flow to nitrate reductase that are coupled to energy conservation in Paracoccus denitrificans , 1983 .

[4]  S. Pirt The maintenance energy of bacteria in growing cultures , 1965, Proceedings of the Royal Society of London. Series B. Biological Sciences.

[5]  S. Ferguson,et al.  Proton electrochemical gradients and energy-transduction processes. , 1982, Annual review of biochemistry.

[6]  F. Boogerd,et al.  Dissimilatory nitrate uptake in Paracoccus denitrificans via a Δ\̃gmH+-dependent system and a nitrate-nitrite antiport system , 1983 .

[7]  M. Braster,et al.  Eubacteria have 3 growth modes keyed to nutrient flow , 1984, Archives of Microbiology.

[8]  J. McCarthy,et al.  Characterisation of membrane vesicles from Paracoccus denitrificans and measurements of the effect of partial uncoupling on their thermodynamics of oxidative phosphorylation. , 1983, European journal of biochemistry.

[9]  F. Boogerd,et al.  Electron transport to nitrous oxide in Paracoccus denitrificans , 1980, FEBS letters.

[10]  F. Boogerd,et al.  Effects of electron transport inhibitors and uncouplers on denitrification in Paracoccus denitrificans , 1983 .

[11]  J. G. Morris,et al.  Studies on the utilization of nitrate by Micrococcus denitrificans. , 1962, Journal of general microbiology.

[12]  F. Boogerd,et al.  Respiration-driven proton translocation with nitrite and nitrous oxide in Paracoccus denitrificans. , 1981, Biochimica et biophysica acta.

[13]  S. Ferguson,et al.  The location of dissimilatory nitrite reductase and the control of dissimilatory nitrate reductase by oxygen in Paracoccus denitrificans. , 1980, The Biochemical journal.

[14]  J. Kristjánsson,et al.  Respiration-dependent proton translocation and the transport of nitrate and nitrite in Paracoccus denitrificans and other denitrifying bacteria. , 1978, Biochemistry.

[15]  F. Boogerd,et al.  The bioenergetics of denitrification , 2004, Antonie van Leeuwenhoek.

[16]  D. Kell,et al.  The protonmotive force in phosphorylating membrane vesicles from Paracoccus denitrificans. Magnitude, sites of generation and comparison with the phosphorylation potential. , 1978, The Biochemical journal.

[17]  A. H. Stouthamer,et al.  A quantitative description of heterotrophic growth in micro-organisms. , 1976, Journal of theoretical biology.

[18]  A. H. Stouthamer,et al.  Fermentation of Glucose, Lactose, Galactose, Mannitol, and Xylose by Bifidobacteria , 1968, Journal of bacteriology.

[19]  Arthur J. L. Cooper,et al.  13N,15N isotope and kinetic evidence against hyponitrite as an intermediate in dentrification. , 1980, The Journal of biological chemistry.

[20]  I. Koike,et al.  Growth yield of a denitrifying bacterium, Pseudomonas denitrificans, under aerobic and denitrifying conditions. , 1975, Journal of general microbiology.

[21]  J. McCarthy,et al.  Selection and organisation of denitrifying electron-transfer pathways in Paracoccus denitrificans , 1983 .

[22]  C. W. Jones,et al.  Bacterial respiration. , 1977, Bacteriological reviews.

[23]  M. Braster,et al.  Energetic aspects of growth of Paracoccus denitrificans: oxygen-limitation and shift from anaerobic nitrate-limination to aerobic succinate-limitation , 1983, Archives of Microbiology.

[24]  D. Kelly,et al.  Autotrophic, mixotrophic and heterotrophic growth with denitrification by Thiobacillus A2 under anaerobic conditions , 1983 .

[25]  S. Ferguson,et al.  Direct observation with an electrode of uncoupler‐sensitive assimilatory nitrate uptake by Rhodopseudomonas capsulata , 1981 .

[26]  K. Krab,et al.  Proton pump coupled to cytochrome c oxidase in Paracoccus denitrificans. , 1981, Biochimica et biophysica acta.

[27]  J. van 't Riet,et al.  Regulation of Nitrate Assimilation and Nitrate Respiration in Aerobacter aerogenes , 1968, Journal of bacteriology.

[28]  J. Tiedje,et al.  Assimilatory nitrate uptake in Pseudomonas fluorescens studied using nitrogen-13 , 1981, Archives of Microbiology.