A novel mode of sensory transduction in archaea: binding protein‐mediated chemotaxis towards osmoprotectants and amino acids

Directly upstream of the Halobacterium salinarum transducer genes basT and htpIV we identified two open reading frames (orfs) with significant homologies to genes encoding binding proteins for amino acids and compatible solutes, respectively. Behavioral testing of deletion mutants indicates that halobacterial chemotaxis towards branched‐chain amino acids as well as compatible osmolytes of the betaine family requires both a binding and a transducer protein. We therefore named the binding/transducer proteins BasB/BasT for branched‐chain and sulfur‐containing amino acids and CosB/CosT for compatible solutes. Our data support a signaling mechanism with the binding proteins functioning as lipid‐anchored receptors interacting with the extracellular domain of their cognate transducers. Inspection of the halobacterial genome suggests that BasB and CosB exclusively mediate chemotaxis responses without any additional role in transport, which is in contrast to bacterial binding proteins, which are always part of ABC transport systems. The CosB/CosT system is the first instance of a chemotaxis signaling pathway for organic osmolytes in the living world and natural abundance 13C‐NMR analysis of cytoplasmic extracts suggests that H.salinarum utilizes these solutes for osmotic adaptation.

[1]  B. Poolman,et al.  Peptides and ATP binding cassette peptide transporters. , 2001, Research in microbiology.

[2]  A. Driessen,et al.  Sugar transport in Sulfolobus solfataricus is mediated by two families of binding protein‐dependent ABC transporters , 2001, Molecular microbiology.

[3]  E. Bamberg,et al.  Electrophysiological characterization of specific interactions between bacterial sensory rhodopsins and their transducers. , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[4]  V. Thorsson,et al.  Genome sequence of Halobacterium species NRC-1. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[5]  J. Spudich,et al.  Proton transport by sensory rhodopsins and its modulation by transducer-binding. , 2000, Biochimica et biophysica acta.

[6]  E. Fisher,et al.  Biosynthesis of lipoproteins , 2000 .

[7]  D. Oesterhelt,et al.  Structure of the light-driven chloride pump halorhodopsin at 1.8 A resolution. , 2000, Science.

[8]  D. Oesterhelt,et al.  BasT, a membrane‐bound transducer protein for amino acid detection in Halobacterium salinarum , 2000, Molecular microbiology.

[9]  T. Beveridge Structures of Gram-Negative Cell Walls and Their Derived Membrane Vesicles , 1999, Journal of bacteriology.

[10]  M. Roberts,et al.  Osmoadaptation in Archaea , 1999, Applied and Environmental Microbiology.

[11]  J. Boch,et al.  Two evolutionarily closely related ABC transporters mediate the uptake of choline for synthesis of the osmoprotectant glycine betaine in Bacillus subtilis , 1999, Molecular microbiology.

[12]  Dieter Oesterhelt,et al.  Car: a cytoplasmic sensor responsible for arginine chemotaxis in the archaeon Halobacterium salinarum , 1999, The EMBO journal.

[13]  P. Gardina,et al.  Model of maltose-binding protein/chemoreceptor complex supports intrasubunit signaling mechanism. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[14]  J. Spudich,et al.  The specificity of interaction of archaeal transducers with their cognate sensory rhodopsins is determined by their transmembrane helices. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[15]  E. Bremer,et al.  Uptake and synthesis of compatible solutes as microbial stress responses to high-osmolality environments , 1998, Archives of Microbiology.

[16]  M. Ehrmann,et al.  The ABC maltose transporter , 1998, Molecular microbiology.

[17]  Thomas L. Madden,et al.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.

[18]  P. Jablonski,et al.  2-Sulfotrehalose, a novel osmolyte in haloalkaliphilic archaea , 1997, Journal of bacteriology.

[19]  J. Spudich,et al.  Deletion mapping of the sites on the HtrI transducer for sensory rhodopsin I interaction , 1996, Journal of bacteriology.

[20]  D E Koshland,et al.  Molecular evolution of the C-terminal cytoplasmic domain of a superfamily of bacterial receptors involved in taxis. , 1996, Journal of molecular biology.

[21]  W. Zhang,et al.  The primary structures of the Archaeon Halobacterium salinarium blue light receptor sensory rhodopsin II and its transducer, a methyl-accepting protein. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[22]  J. Rudolph,et al.  A family of halobacterial transducer proteins. , 1996, FEMS microbiology letters.

[23]  W. Zhang,et al.  Signal transduction in the archaeon Halobacterium salinarium is processed through three subfamilies of 13 soluble and membrane-bound transducer proteins. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[24]  J. Soppa,et al.  Characterization of the distal promoter element of halobacteria in vivo using saturation mutagenesis and selection , 1996, Molecular microbiology.

[25]  L. Vuillard,et al.  Halophilic protein stabilization by the mild solubilizing agents nondetergent sulfobetaines. , 1995, Analytical biochemistry.

[26]  I. Sutcliffe,et al.  Lipoproteins of gram-positive bacteria , 1995, Journal of bacteriology.

[27]  J. Rudolph,et al.  Chemotaxis and phototaxis require a CheA histidine kinase in the archaeon Halobacterium salinarium. , 1995, The EMBO journal.

[28]  E. Galinski,et al.  Osmoadaptation in bacteria. , 1995, Advances in microbial physiology.

[29]  P. Engel,et al.  Activity staining of halophilic enzymes: substitution of salt with a zwitterion in non-denaturing electrophoresis. , 1994, Biochemistry and molecular biology international.

[30]  M. Engelhard,et al.  The primary structure of halocyanin, an archaeal blue copper protein, predicts a lipid anchor for membrane fixation. , 1994, The Journal of biological chemistry.

[31]  W. Epstein,et al.  Interdependence of K+ and glutamate accumulation during osmotic adaptation of Escherichia coli. , 1994, The Journal of biological chemistry.

[32]  O. Kandler,et al.  Chapter 8 Cell envelopes of archaea: Structure and chemistry , 1993 .

[33]  J. Spudich,et al.  Primary structure of an archaebacterial transducer, a methyl-accepting protein associated with sensory rhodopsin I. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[34]  S. N. Timasheff Water as ligand: preferential binding and exclusion of denaturants in protein unfolding. , 1992, Biochemistry.

[35]  M. Record,et al.  Origins of the osmoprotective properties of betaine and proline in Escherichia coli K-12 , 1992, Journal of bacteriology.

[36]  M. Adams,et al.  Nucleotide sequence and genetic characterization reveal six essential genes for the LIV-I and LS transport systems of Escherichia coli. , 1990, The Journal of biological chemistry.

[37]  F. Quiocho,et al.  Periplasmic binding protein structure and function. Refined X-ray structures of the leucine/isoleucine/valine-binding protein and its complex with leucine. , 1989, Journal of molecular biology.

[38]  G. L. Hazelbauer,et al.  Site‐directed mutations altering methyl‐accepting residues of a sensory transducer protein , 1988, Proteins.

[39]  F. Neidhardt,et al.  Escherichia Coli and Salmonella: Typhimurium Cellular and Molecular Biology , 1987 .

[40]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[41]  D. Oesterhelt,et al.  Phototrophic growth of halobacteria and its use for isolation of photosynthetically-deficient mutants. , 1983, Annales de microbiologie.

[42]  D. Oesterhelt,et al.  Potassium uniport and ATP synthesis in Halobacterium halobium. , 1978, European journal of biochemistry.

[43]  R. Goody,et al.  The ternary complex formed between actin, myosin subfragment 1 and ATP (β, γ‐NH) , 1978 .

[44]  A. D. Brown,et al.  Microbial water stress. , 1976, Bacteriological reviews.

[45]  J H CHRISTIAN,et al.  Solute concentrations within cells of halophilic and non-halophilic bacteria. , 1962, Biochimica et biophysica acta.