An Enzyme-Catalyzed [4+2] Cycloaddition is a Key Step in the Biosynthesis of Spinosyn A

The Diels–Alder reaction is a [4+2] cycloaddition reaction in which a cyclohexene ring is formed between a 1,3-diene and an electron-deficient alkene via a single pericyclic transition state. This reaction has been proposed as a key transformation in the biosynthesis of many cyclohexene-containing secondary metabolites. However, only four purified enzymes have thus far been implicated in biotransformations that are consistent with a Diels–Alder reaction, namely solanapyrone synthase, LovB, macrophomate synthase, and riboflavin synthase. Although the stereochemical outcomes of these reactions indicate that the product formation could be enzyme-guided in each case, these enzymes typically demonstrate more than one catalytic activity, leaving their specific influence on the cycloaddition step uncertain. In our studies of the biosynthesis of spinosyn A, a tetracyclic polyketide-derived insecticide from Saccharopolyspora spinosa, we identified a cyclase, SpnF, that catalyses a transannular [4+2] cycloaddition to form the cyclohexene ring in spinosyn A. Kinetic analysis demonstrates that SpnF specifically accelerates the ring formation reaction with an estimated 500-fold rate enhancement. A second enzyme, SpnL, was also identified as responsible for the final cross-bridging step that completes the tetracyclic core of spinosyn A in a manner consistent with a Rauhut–Currier reaction. This work is significant because SpnF represents the first example characterized in vitro of a stand-alone enzyme solely committed to the catalysis of a [4+2] cycloaddition reaction. In addition, the mode of formation of the complex perhydro-as-indacene moiety in spinosyn A is now fully established.

[1]  N. Draper,et al.  Applied Regression Analysis: Draper/Applied Regression Analysis , 1998 .

[2]  P. Hartman Ordinary Differential Equations , 1965 .

[3]  H. Chiu,et al.  Functional Characterization and Substrate Specificity of Spinosyn Rhamnosyltransferase by in Vitro Reconstitution of Spinosyn Biosynthetic Enzymes* , 2009, Journal of Biological Chemistry.

[4]  Hung‐wen Liu,et al.  The biosynthesis of spinosyn in Saccharopolyspora spinosa: synthesis of the cross-bridging precursor and identification of the function of SpnJ. , 2007, Journal of the American Chemical Society.

[5]  C. Thibodeaux,et al.  Natural-product sugar biosynthesis and enzymatic glycodiversification. , 2008, Angewandte Chemie.

[6]  C. Thibodeaux,et al.  Unusual sugar biosynthesis and natural product glycodiversification , 2007, Nature.

[7]  W. Roush,et al.  Total synthesis of (-)-spinosyn A. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[8]  J. Vederas,et al.  Complete Reconstitution of a Highly Reducing Iterative Polyketide Synthase , 2009, Science.

[9]  R. H. Baltz,et al.  Cloning and analysis of the spinosad biosynthetic gene cluster of Saccharopolyspora spinosa. , 2001, Chemistry & biology.

[10]  H. Oikawa Biosynthesis of structurally unique fungal metabolite GKK1032A(2): indication of novel carbocyclic formation mechanism in polyketide biosynthesis. , 2003, The Journal of organic chemistry.

[11]  Hung‐wen Liu,et al.  Biosynthesis of spinosyn in Saccharopolyspora spinosa: synthesis of permethylated rhamnose and characterization of the functions of SpnH, SpnI, and SpnK. , 2010, Journal of the American Chemical Society.

[12]  R. Huisgen Cycloadditions — Definition, Classification, and Characterization , 1968 .

[13]  Cristiano Ruch Werneck Guimarães,et al.  Macrophomate synthase: QM/MM simulations address the Diels-Alder versus Michael-Aldol reaction mechanism. , 2005, Journal of the American Chemical Society.

[14]  D. Hilvert,et al.  The putative Diels-Alderase macrophomate synthase is an efficient aldolase. , 2008, Journal of the American Chemical Society.

[15]  H. Kirst The spinosyn family of insecticides: realizing the potential of natural products research , 2010, The Journal of Antibiotics.

[16]  A. R. Hutchinson,et al.  Lovastatin Nonaketide Synthase Catalyzes an Intramolecular Diels−Alder Reaction of a Substrate Analogue , 2000 .

[17]  C Frieden,et al.  Analysis of kinetic data: practical applications of computer simulation and fitting programs. , 1994, Methods in enzymology.

[18]  W. Kelly Intramolecular cyclizations of polyketide biosynthesis: mining for a "Diels-Alderase"? , 2008, Organic & biomolecular chemistry.

[19]  K. Michel,et al.  A83543A-D, unique fermentation-derived tetracyclic macrolides , 1991 .

[20]  W. Eisenreich,et al.  Mechanistic insights on riboflavin synthase inspired by selective binding of the 6,7-dimethyl-8-ribityllumazine exomethylene anion. , 2010, Journal of the American Chemical Society.

[21]  I. Tanaka,et al.  Insight into a natural Diels–Alder reaction from the structure of macrophomate synthase , 2003, Nature.

[22]  L. Mander,et al.  Comprehensive Natural Products II: Chemistry and Biology , 2010 .

[23]  Christine J. Martin,et al.  Heterologous expression in Saccharopolyspora erythraea of a pentaketide synthase derived from the spinosyn polyketide synthase. , 2003, Organic & biomolecular chemistry.

[24]  Robert M. Williams,et al.  Chemistry and biology of biosynthetic Diels-Alder reactions. , 2003, Angewandte Chemie.

[25]  Scott J. Miller,et al.  The Rauhut–Currier reaction: a history and its synthetic application , 2009 .

[26]  Kenji Watanabe,et al.  Detailed Reaction Mechanism of Macrophomate Synthase , 2000, The Journal of Biological Chemistry.

[27]  A. Bacher,et al.  Domain structure of riboflavin synthase. , 2001, European journal of biochemistry.

[28]  N. Draper,et al.  Applied Regression Analysis , 1966 .

[29]  K. Katayama,et al.  Enzymatic activity catalysing exo-selective Diels–Alder reaction in solanapyrone biosynthesis , 1995 .