Cell cycle regulatory protein p27KIP1 is a substrate and interacts with the protein kinase CK2

The protein kinase CK2 is constituted by two catalytic (α and/or α′) and two regulatory (β) subunits. CK2 phosphorylates more than 300 proteins with important functions in the cell cycle. This study has looked at the relation between CK2 and p27KIP1, which is a regulator of the cell cycle and a known inhibitor of cyclin‐dependent kinases (Cdk). We demonstrated that in vitro recombinant Xenopus laevis CK2 can phosphorylate recombinant human p27KIP1, but this phosphorylation occurs only in the presence of the regulatory β subunit. The principal site of phosphorylation is serine‐83. Analysis using pull down and surface plasmon resonance (SPR) techniques showed that p27KIP1 interacts with the β subunit through two domains present in the amino and carboxyl ends, while CD spectra showed that p27KIP1 phosphorylation by CK2 affects its secondary structure. Altogether, these results suggest that p27KIP1 phosphorylation by CK2 probably involves a docking event mediated by the CK2β subunit. The phosphorylation of p27KIP1 by CK2 may affect its biological activity. © 2004 Wiley‐Liss, Inc.

[1]  A. Berns,et al.  Loss of p27Kip1 but not p21Cip1 decreases survival and synergizes with MYC in murine lymphomagenesis , 2002, The EMBO journal.

[2]  M. Montenarh,et al.  p21WAF1/CIP1 interacts with protein kinase CK2. , 1996, Oncogene.

[3]  M. Montenarh,et al.  Binding domain for p21(WAF1) on the polypeptide chain of the protein kinase CK2 beta-subunit. , 2000, Biochemical and biophysical research communications.

[4]  Joshua N Adkins,et al.  Functional consequences of preorganized helical structure in the intrinsically disordered cell-cycle inhibitor p27(Kip1). , 2001, Biochemistry.

[5]  O. Issinger,et al.  Protein kinase CK2 and its role in cellular proliferation, development and pathology , 1999, Electrophoresis.

[6]  David Beach,et al.  p21 is a universal inhibitor of cyclin kinases , 1993, Nature.

[7]  S. Ho,et al.  Site-directed mutagenesis by overlap extension using the polymerase chain reaction. , 1989, Gene.

[8]  James M. Roberts,et al.  Cyclin E-CDK2 is a regulator of p27Kip1. , 1997, Genes & development.

[9]  R. N. Miguel,et al.  On the structure and function of apolipoproteins: more than a family of lipid-binding proteins. , 2003, Progress in biophysics and molecular biology.

[10]  S. Elledge,et al.  p57KIP2, a structurally distinct member of the p21CIP1 Cdk inhibitor family, is a candidate tumor suppressor gene. , 1995, Genes & development.

[11]  C. Turck,et al.  Inhibition of CDK2 activity in vivo by an associated 20K regulatory subunit , 1993, Nature.

[12]  M. Pagano,et al.  The cyclin dependent kinase inhibitor p27 and its prognostic role in breast cancer , 2000, Breast Cancer Research.

[13]  HIV-1 Rev transactivator: A β-subunit directed substrate and effector of protein kinase CK2 , 2001 .

[14]  H. Dyson,et al.  Insights into protein folding from NMR. , 1996, Annual review of physical chemistry (Print).

[15]  M. A. Downs,et al.  Rhodopsin Controls a Conformational Switch on the Transducin γ Subunit , 2003 .

[16]  T. Blundell,et al.  Interactions of protein kinase CK2 subunits , 2004, Molecular and Cellular Biochemistry.

[17]  Kyou-Hoon Han,et al.  Local Structural Elements in the Mostly Unstructured Transcriptional Activation Domain of Human p53* , 2000, The Journal of Biological Chemistry.

[18]  L. Pinna,et al.  One‐thousand‐and‐one substrates of protein kinase CK2? , 2003, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[19]  James M. Roberts,et al.  A mouse knock-in model exposes sequential proteolytic pathways that regulate p27Kip1 in G1 and S phase , 2001, Nature.

[20]  E. Nabel,et al.  A growth factor‐dependent nuclear kinase phosphorylates p27Kip1 and regulates cell cycle progression , 2002, The EMBO journal.

[21]  J. Kato,et al.  Degradation of the cyclin-dependent-kinase inhibitor p27Kip1 is instigated by Jab1 , 1999, Nature.

[22]  S. Pongor,et al.  Activity of recombinant alpha and beta subunits of casein kinase II from Xenopus laevis. , 1993, Biochemistry.

[23]  M. Andretta,et al.  Phosphorylation of synthetic fragments of inhibitor-2 of protein phosphatase-1 by casein kinase-1 and -2. Evidence that phosphorylated residues are not strictly required for efficient targeting by casein kinase-1. , 1994, European journal of biochemistry.

[24]  B. Sefton,et al.  Protein kinases. , 1989, Cancer cells.

[25]  L. Di Marcotullio,et al.  p27 cytoplasmic localization is regulated by phosphorylation on Ser10 and is not a prerequisite for its proteolysis , 2001, The EMBO journal.

[26]  X. Deng,et al.  HY5 stability and activity in Arabidopsis is regulated by phosphorylation in its COP1 binding domain , 2000, The EMBO journal.

[27]  S. Shaltiel,et al.  Phosphorylation of Vitronectin by Casein Kinase II , 1998, The Journal of Biological Chemistry.

[28]  R. Hegerl,et al.  Electron microscopy and subunit-subunit interaction studies reveal a first architecture of COP9 signalosome. , 2000, Journal of molecular biology.

[29]  Xiping Wang,et al.  The COP9 Signalosome Inhibits p27kip1 Degradation and Impedes G1-S Phase Progression via Deneddylation of SCF Cul1 , 2002, Current Biology.

[30]  C. Bendixen,et al.  Interactions of protein kinase CK2beta subunit within the holoenzyme and with other proteins. , 1999 .

[31]  D. B. Evans,et al.  The N-terminal domains of cyclin-dependent kinase inhibitory proteins block the phosphorylation of cdk2/Cyclin E by the CDK-activating kinase. , 2000, Biochemical and biophysical research communications.

[32]  Makoto Nakanishi,et al.  Critical Role for the 310 Helix Region of p57Kip2 in Cyclin-dependent Kinase 2 Inhibition and Growth Suppression* , 1998, The Journal of Biological Chemistry.

[33]  M. Pagano,et al.  Regulation of the Cdk inhibitor p27 and its deregulation in cancer , 2000, Journal of cellular physiology.

[34]  J. Tapia,et al.  Role of the carboxyl terminus on the catalytic activity of protein kinase CK2α subunit , 2002, FEBS letters.

[35]  M. Soriano-garcia,et al.  Stability of the C-terminal peptide of CETP mediated through an (i, i + 4) array. , 1998, Biochimica et biophysica acta.

[36]  Tony Hunter,et al.  p27, a novel inhibitor of G1 cyclin-Cdk protein kinase activity, is related to p21 , 1994, Cell.

[37]  O. Issinger,et al.  Casein kinase 2 down-regulation and activation by polybasic peptides are mediated by acidic residues in the 55-64 region of the beta-subunit. A study with calmodulin as phosphorylatable substrate. , 1994, Biochemistry.

[38]  Philip D. Jeffrey,et al.  Crystal structure of the p27Kip1 cyclin-dependent-kinase inibitor bound to the cyclin A–Cdk2 complex , 1996, Nature.

[39]  J. Allende,et al.  Protein p21WAF1/CIP1 is phosphorylated by protein kinase CK2 in vitro and interacts with the amino terminal end of the CK2 beta subunit , 2001, Journal of cellular biochemistry.

[40]  O. Medalia,et al.  Protein kinase CK2 and protein kinase D are associated with the COP9 signalosome , 2003, The EMBO journal.

[41]  C. Schwechheimer,et al.  COP9 signalosome revisited: a novel mediator of protein degradation. , 2001, Trends in cell biology.

[42]  James M. Roberts,et al.  Cloning of p27 Kip1 , a cyclin-dependent kinase inhibitor and a potential mediator of extracellular antimitogenic signals , 1994, Cell.

[43]  Structural preordering in the N-terminal region of ribosomal protein S4 revealed by heteronuclear NMR spectroscopy. , 2000, Biochemistry.

[44]  S. Wick,et al.  Mechanism of Cdk2/Cyclin E inhibition by p27 and p27 phosphorylation. , 1999, Biochemistry.

[45]  K. Ahmed,et al.  Joining the cell survival squad: an emerging role for protein kinase CK2. , 2002, Trends in cell biology.

[46]  C. Allende,et al.  Protein kinase CK2: an enzyme with multiple substrates and a puzzling regulation , 1995, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[47]  James M. Roberts,et al.  CDK inhibitors: positive and negative regulators of G1-phase progression. , 1999, Genes & development.

[48]  D. Litchfield Protein kinase CK2: structure, regulation and role in cellular decisions of life and death. , 2003, The Biochemical journal.

[49]  C. Zetina,et al.  A conserved helix‐unfolding motif in the naturally unfolded proteins , 2001, Proteins.

[50]  B. Schulman,et al.  Substrate recruitment to cyclin-dependent kinase 2 by a multipurpose docking site on cyclin A. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[51]  Marco Antonio Boschetti,et al.  Unique features of HIV‐1 Rev protein phosphorylation by protein kinase CK2 (‘casein kinase‐2’) , 2000, FEBS letters.

[52]  Radha Akella,et al.  Crystal structures of MAP kinase p38 complexed to the docking sites on its nuclear substrate MEF2A and activator MKK3b. , 2002, Molecular cell.

[53]  T. Boyer,et al.  Phosphorylation of the Human Ubiquitin-conjugating Enzyme, CDC34, by Casein Kinase 2* , 2001, The Journal of Biological Chemistry.

[54]  K. Lumb,et al.  Effects of macromolecular crowding on the intrinsically disordered proteins c-Fos and p27(Kip1). , 2001, Biomacromolecules.

[55]  C. Allende,et al.  Promiscuous subunit interactions: a possible mechanism for the regulation of protein kinase CK2. , 1998, Journal of cellular biochemistry. Supplement.

[56]  W. Baumeister,et al.  The 26S proteasome: a molecular machine designed for controlled proteolysis. , 1999, Annual review of biochemistry.