Graphical representation of proteins.

6.8. Protein Profiles 823 7. Spectrum-like Representation of Proteins 824 8. Graphical Approach to Protein Alignment 825 9. Nongraphical Representation of Proteins 828 9.1. Representation of Proteins as Walks in Space 828 9.2. Protein Descriptors 829 10. Most Recent Results 830 10.1. Amino Acid Adjacency-Count Matrix 830 10.2. Higher-Order AA Adjacency-Count Matrices 834 10.3. Simplified Graphical Representations of Proteins 834

[1]  D. Rouvray,et al.  Topology in Chemistry: Discrete Mathematics of Molecules , 2002 .

[2]  Guillaume Lecointre,et al.  The Tree of Life: A Phylogenetic Classification , 2006 .

[3]  A. Gray.  Inventions, Researches, and Writings of Nikola Tesla , 1895, Nature.

[4]  L. Hall,et al.  Molecular connectivity in chemistry and drug research , 1976 .

[5]  C. Sparrow.  The Fractal Geometry of Nature , 1984 .

[6]  Annie Bessot.  Geometry at Work , 2000 .

[7]  Ranbir Singh,et al.  J. Mol. Struct. (Theochem) , 1996 .

[8]  J. A. Bondy,et al.  Graph Theory with Applications , 1978 .

[9]  P. Kollman,et al.  Encyclopedia of computational chemistry , 1998 .

[10]  H. Goldstine,et al.  The Computer from Pascal to von Neumann , 1974 .

[11]  A. Balaban.  Chemical applications of graph theory , 1976 .

[12]  B. M. Fulk.  MATH , 1992 .

[13]  G. Hardy.  A Course of Pure Mathematics , 1910 .

[14]  Roberto Todeschini,et al.  Molecular descriptors for chemoinformatics , 2009 .

[15]  Clifford A. Pickover,et al.  Frontiers of scientific visualization , 1994 .

[16]  Benoit B. Mandelbrot,et al.  Fractals and chaos : the Mandelbrot set and beyond : selecta volume C , 2004 .

[17]  F. Bartlett,et al.  Remembering: A Study in Experimental and Social Psychology , 1932 .

[18]  P. Conn.  Handbook of Proteomic Methods , 2003, Humana Press.

[19]  BMC Bioinformatics , 2005 .

[20]  Jerry Ray Dias,et al.  Chemical Applications of Graph Theory , 1992 .

[21]  N. J. A. Sloane,et al.  The On-Line Encyclopedia of Integer Sequences , 2003, Electron. J. Comb..

[22]  B. Garcia,et al.  Proteomics , 2011, Journal of biomedicine & biotechnology.

[23]  Alexandru T. Balaban,et al.  From chemical topology to three-dimensional geometry , 2002 .

[24]  Alan R. Katritzky,et al.  COMPREHENSIVE DESCRIPTORS FOR STRUCTURAL AND STATISTICAL ANALYSIS. 1 : CORRELATIONS BETWEEN STRUCTURE AND PHYSICAL PROPERTIES OF SUBSTITUTED PYRIDINES , 1996 .