Automatic Lumen Segmentation in Intravascular Optical Coherence Tomography Using Morphological Features

Lumen segmentation in intravascular optical coherence tomography (IVOCT) images is a fundamental work for more advanced plaque analysis, stent recognition, fractional flow reserve (FFR) assessment, and so on. However, the catheter, guide-wire, inadequate blood clearance, and other factors will impact on the accuracy of lumen segmentation. We present a simple and effective method for automatic lumen segmentation method in IVOCT based on morphological features. We use image enhancement, median filtering, image binarization, and morphological closing operation to reduce speckle noise, minimize the effect of blood artifacts and fill in small holes inside vascular walls. We extract the orientation and area-size of connected regions as morphological features in images and remove the catheter and guide-wire completely by morphological corrosion operation, small area-size region removal, and orientation morphological feature comparison, and then the contour of the lumen can be discriminated. The evaluation metrics of this method, the Dice index, Hausdorff distance, Jaccard index, and accuracy of 99.32%, 0.06 mm, 99.4%, and 99.66%, respectively, are obtained from comparing with expert annotations on 268 IVOCT images. Compared with the other morphology-based lumen segmentation methods, the presented method can remove the catheter and guide-wire completely, even if the catheter and guide-wire cling to the lumen or the shape of the catheter is irregular. Since only morphological operations are used to complete all processes, the calculation burden is reduced greatly.

[1]  Qinye Yin,et al.  Automatic Lumen Segmentation in Intravascular Optical Coherence Tomography Images Using Level Set , 2017, Comput. Math. Methods Medicine.

[2]  Yih Miin Liew,et al.  Linear-regression convolutional neural network for fully automated coronary lumen segmentation in intravascular optical coherence tomography , 2017, Journal of biomedical optics.

[3]  B E Bouma,et al.  High resolution in vivo intra-arterial imaging with optical coherence tomography , 1999, Heart.

[4]  Martin Villiger,et al.  Intravascular optical coherence tomography [Invited]. , 2017, Biomedical optics express.

[5]  Elazer R Edelman,et al.  Polymeric endovascular strut and lumen detection algorithm for intracoronary optical coherence tomography images , 2018, Journal of biomedical optics.

[6]  Qinye Yin,et al.  Automatic Side Branch Ostium Detection and Main Vascular Segmentation in Intravascular Optical Coherence Tomography Images , 2018, IEEE Journal of Biomedical and Health Informatics.

[7]  Elazer R. Edelman,et al.  A Mechanical Approach for Smooth Surface Fitting to Delineate Vessel Walls in Optical Coherence Tomography Images , 2019, IEEE Transactions on Medical Imaging.

[8]  Simona Celi,et al.  In-vivo segmentation and quantification of coronary lesions by optical coherence tomography images for a lesion type definition and stenosis grading , 2014, Medical Image Anal..

[9]  Jiang Liu,et al.  Graph based lumen segmentation in optical coherence tomography images , 2015, 2015 10th International Conference on Information, Communications and Signal Processing (ICICS).

[10]  Jayaram K. Udupa,et al.  A framework for evaluating image segmentation algorithms , 2006, Comput. Medical Imaging Graph..

[11]  Woei-Chyn Chu,et al.  Performance measure characterization for evaluating neuroimage segmentation algorithms , 2009, NeuroImage.

[12]  B E Bouma,et al.  Images in cardiovascular medicine. Catheter-based optical imaging of a human coronary artery. , 1996, Circulation.

[13]  Ik-KyungJang,et al.  Visualization of Tissue Prolapse Between Coronary Stent Struts by Optical Coherence Tomography , 2001 .

[14]  Jan D’hooge,et al.  Fully automatic three-dimensional visualization of intravascular optical coherence tomography images: methods and feasibility in vivo , 2012, Biomedical optics express.

[15]  Haroon Zafar,et al.  Feasibility of intracoronary frequency domain optical coherence tomography derived fractional flow reserve for the assessment of coronary artery stenosis. , 2014, International heart journal.

[16]  Sérgio Shiguemi Furuie,et al.  Automatic lumen segmentation in IVOCT images using binary morphological reconstruction , 2013, Biomedical engineering online.

[17]  François Chaumette,et al.  Image moments: a general and useful set of features for visual servoing , 2004, IEEE Transactions on Robotics.

[18]  A. Ayatollahi,et al.  Vessel wall detection in the images of intravascular Optical coherence tomography based on the graph cut segmentation , 2017, 2017 Iranian Conference on Electrical Engineering (ICEE).

[19]  Marly Guimarães Fernandes Costa,et al.  Lumen Segmentation in Optical Coherence Tomography Images using Convolutional Neural Network , 2018, 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

[20]  Gijs van Soest,et al.  Optical Coherence Tomography: Potential Clinical Applications , 2012, Current Cardiovascular Imaging Reports.

[21]  Zhao Wang,et al.  Volumetric quantification of fibrous caps using intravascular optical coherence tomography , 2012, Biomedical optics express.

[22]  Pedro A. Lemos,et al.  A bifurcation identifier for IV-OCT using orthogonal least squares and supervised machine learning , 2015, Comput. Medical Imaging Graph..

[23]  Wolfgang Drexler,et al.  High resolution in vivo intra-arterial imaging with optical coherence tomography , 1999, Photonics West - Biomedical Optics.

[24]  Setareh Rezaee Oshterinan,et al.  Fully Automated lumen detection in intravascular OCT images by using fuzzy system , 2014 .

[25]  Tomoyuki Koike,et al.  Optical coherence tomography for the staging of tumor infiltration in superficial esophageal squamous cell carcinoma. , 2010, Gastrointestinal endoscopy.

[26]  F. Jaffer,et al.  Dual modality intravascular optical coherence tomography (OCT) and near-infrared fluorescence (NIRF) imaging: a fully automated algorithm for the distance-calibration of NIRF signal intensity for quantitative molecular imaging , 2014, The International Journal of Cardiovascular Imaging.

[27]  Andreas Giannopoulos,et al.  Optical coherence tomography: an arrow in our quiver , 2012, Expert review of cardiovascular therapy.

[28]  Andrew M. Rollins,et al.  Automatic segmentation of intravascular optical coherence tomography images for facilitating quantitative diagnosis of atherosclerosis , 2011, BiOS.

[29]  Shiju Joseph,et al.  Automatic segmentation of coronary morphology using transmittance-based lumen intensity-enhanced intravascular optical coherence tomography images and applying a localized level-set-based active contour method , 2016, Journal of medical imaging.

[30]  Jinsong Leng,et al.  Analysis of Hu's moment invariants on image scaling and rotation , 2010, 2010 2nd International Conference on Computer Engineering and Technology.