Parallel algorithms and implementations for genetic analysis of quantitative traits
暂无分享,去创建一个
[1] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .
[2] Jingwei Zhang,et al. Numerical Methods for the Chemical Master Equation , 2009 .
[3] Linda Brus,et al. Recursive black-box identification of nonlinear state-space ODE models , 2006 .
[4] L. Watson,et al. A Hierarchical Parallel Scheme for a Global Search Algorithm , 2004 .
[5] Clifford A. Shaffer,et al. Hierarchical parallel scheme for global parameter estimation in systems biology , 2004, 18th International Parallel and Distributed Processing Symposium, 2004. Proceedings..
[6] J. Todd,et al. Microsatellites for linkage analysis of genetic traits. , 1992, Trends in genetics : TIG.
[7] L Kruglyak,et al. High-resolution genetic mapping of complex traits. , 1995, American journal of human genetics.
[8] A. Darvasi,et al. Experimental strategies for the genetic dissection of complex traits in animal models , 1998, Nature Genetics.
[9] Michael Lee,et al. QTLs and epistasis associated with vernalization responses in oat , 1997 .
[10] Jonas Boustedt. Students working with a large software system : experiences and understandings , 2007 .
[11] Sverker Holmgren,et al. Simultaneous search for multiple QTL using the global optimization algorithm DIRECT , 2004, Bioinform..
[12] Anna Eckerdal,et al. Novice students' learning of object-oriented programming , 2006 .
[13] J. Wendel,et al. Molecular-marker-facilitated investigations of quantitative-trait loci in maize. I. Numbers, genomic distribution and types of gene action. , 1987, Genetics.
[14] Hao Wu,et al. R/qtl: QTL Mapping in Experimental Crosses , 2003, Bioinform..
[15] Genetic models to estimate additive and non-additive effects of marker-associated QTL using multiple regression techniques , 1992, Theoretical and Applied Genetics.
[16] Z B Zeng,et al. Theoretical basis for separation of multiple linked gene effects in mapping quantitative trait loci. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[17] Åsa Cajander,et al. Values and perspectives affecting IT systems development and usability work , 2006 .
[18] C. D. Perttunen,et al. Lipschitzian optimization without the Lipschitz constant , 1993 .
[19] R. Jansen,et al. Interval mapping of multiple quantitative trait loci. , 1993, Genetics.
[20] Bernard Grossman,et al. Parallel Global Aircraft Configuration Design Space Exploration , 1999 .
[21] Sverker Holmgren,et al. Efficient Algorithms for Quantitative Trait Loci Mapping Problems , 2002, J. Comput. Biol..
[22] Eddie Wadbro,et al. Topology optimization for acoustic wave propagation problems , 2006 .
[23] Anthony Skjellum,et al. A High-Performance, Portable Implementation of the MPI Message Passing Interface Standard , 1996, Parallel Comput..
[24] Chen-Hung Kao,et al. Multiple-Interval Mapping for Quantitative Trait Loci Controlling Endosperm Traits , 2004, Genetics.
[25] T. Brody,et al. On the power of experimental designs for the detection of linkage between marker loci and quantitative loci in crosses between inbred lines , 2004, Theoretical and Applied Genetics.
[26] D. Finkel,et al. Direct optimization algorithm user guide , 2003 .
[27] D. Rubin,et al. Maximum likelihood from incomplete data via the EM - algorithm plus discussions on the paper , 1977 .
[28] G A Churchill,et al. Concordance of murine quantitative trait loci for salt-induced hypertension with rat and human loci. , 2001, Genomics.
[29] Arvid Kauppi,et al. A human-computer interaction approach to train traffic control , 2006 .
[30] K. Broman,et al. Review of statistical methods for QTL mapping in experimental crosses. , 2001, Lab animal.
[31] Mikael Erlandsson,et al. Usability in Transportation - Improving the Analysis of Cognitive Work Tasks , 2006 .
[32] Mahen Jayawardena,et al. Using Parallel Computing and Grid Systems for Genetic Mapping of Quantitative Traits , 2006, PARA.
[33] C. Haley,et al. A simple regression method for mapping quantitative trait loci in line crosses using flanking markers , 1992, Heredity.
[34] M. Greene,et al. Genetics of breast cancer. , 1997, Mayo Clinic proceedings.
[35] R. Doerge. Multifactorial genetics: Mapping and analysis of quantitative trait loci in experimental populations , 2002, Nature Reviews Genetics.
[36] D. Finkel,et al. An Adaptive Restart Implementation of DIRECT , 2004 .
[37] S. Holmgren,et al. Efficient Implementation of the AI-REML Iteration for Variance Component QTL Analysis , 2007, 0709.0625.
[38] J. Weller. Maximum likelihood techniques for the mapping and analysis of quantitative trait loci with the aid of genetic markers. , 1986, Biometrics.
[39] E. Lander,et al. Mapping mendelian factors underlying quantitative traits using RFLP linkage maps. , 1989, Genetics.
[40] Xiao-Li Meng,et al. Maximum likelihood estimation via the ECM algorithm: A general framework , 1993 .
[41] R. Jansen. A general mixture model for mapping quantitative trait loci by using molecular markers , 1992, Theoretical and Applied Genetics.
[42] Kenneth Holmström,et al. Global Optimization Using the DIRECT Algorithm in Matlab , 1999 .
[43] L. Andersson,et al. Genetic mapping of quantitative trait loci for growth and fatness in pigs. , 1994, Science.
[44] B. Kinghorn,et al. The use of a genetic algorithm for simultaneous mapping of multiple interacting quantitative trait loci. , 2000, Genetics.
[45] Therese Berg,et al. Regular inference for reactive systems , 2006 .
[46] Nicholas Carriero,et al. Linda in context , 1989, CACM.
[47] G. Montgomery,et al. Segregation of a major gene influencing fecundity in progeny of Booroola sheep , 1982 .
[48] George Seaton,et al. QTL Express: mapping quantitative trait loci in simple and complex pedigrees , 2002, Bioinform..
[49] Henrik Johansson,et al. Performance characterization and evaluation of parallel PDE solvers , 2006 .
[50] Mahen Jayawardena,et al. Grid-Enabling an Efficient Algorithm for Demanding Global Optimization Problems in Genetic Analysis , 2007, Third IEEE International Conference on e-Science and Grid Computing (e-Science 2007).
[51] O. Carlborg,et al. Parallel computing in interval mapping of quantitative trait loci. , 2001, The Journal of heredity.
[52] C H Kao,et al. On the differences between maximum likelihood and regression interval mapping in the analysis of quantitative trait loci. , 2000, Genetics.
[53] Z. Zeng. Precision mapping of quantitative trait loci. , 1994, Genetics.
[54] K. Chase,et al. Epistat : a computer program for identifying and testing interactions between pairs of quantitative trait loci , 1997, Theoretical and Applied Genetics.
[55] R. N. Curnow,et al. Estimating the locations and the sizes of the effects of quantitative trait loci using flanking markers , 1992, Theoretical and Applied Genetics.
[56] G A Churchill,et al. Genome-wide epistatic interaction analysis reveals complex genetic determinants of circadian behavior in mice. , 2001, Genome research.
[57] A. Paterson,et al. Epistasis for three grain yield components in rice (Oryza sativa L.). , 1997, Genetics.
[58] W. Ewens. Genetics and analysis of quantitative traits , 1999 .
[59] Z. Zeng,et al. Multiple interval mapping for quantitative trait loci. , 1999, Genetics.
[60] Michel Georges,et al. A deletion in the bovine myostatin gene causes the double–muscled phenotype in cattle , 1997, Nature Genetics.
[61] S. Kerje,et al. A global search reveals epistatic interaction between QTL for early growth in the chicken. , 2003, Genome research.
[62] S. Knapp,et al. Mapping quantitative trait loci using molecular marker linkage maps , 1990, Theoretical and Applied Genetics.
[63] R. Doerge,et al. Empirical threshold values for quantitative trait mapping. , 1994, Genetics.
[64] Chris S. Haley,et al. Epistasis: too often neglected in complex trait studies? , 2004, Nature Reviews Genetics.
[65] D. Botstein,et al. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. , 1980, American journal of human genetics.
[66] Masha Sosonkina,et al. Design and implementation of a massively parallel version of DIRECT , 2008, Comput. Optim. Appl..