We propose a deep learning clustering method that exploits dense features from a segmentation network for emphysema subtyping from computed tomography (CT) scans. Using dense features enables high-resolution visualization of image regions corresponding to the cluster assignment via dense clustering activation maps (dCAMs). This approach provides model interpretability. We evaluated clustering results on 500 subjects from the COPDGene study, where radiologists manually annotated emphysema sub-types according to their visual CT assessment. We achieved a 43% unsupervised clustering accuracy, outperforming our baseline at 41% and yielding results comparable to supervised classification at 45%. The proposed method also offers a better cluster formation than the baseline, achieving 0.54 in silhouette coefficient and 0.55 in David-Bouldin scores.
[1]
Matthijs Douze,et al.
Deep Clustering for Unsupervised Learning of Visual Features
,
2018,
ECCV.
[2]
Edwin K Silverman,et al.
CT-Definable Subtypes of Chronic Obstructive Pulmonary Disease: A Statement of the Fleischner Society.
,
2015,
Radiology.
[3]
D. Lynch,et al.
Deep Learning Enables Automatic Classification of Emphysema Pattern at CT.
,
2019,
Radiology.
[4]
Bolei Zhou,et al.
Learning Deep Features for Discriminative Localization
,
2015,
2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).
[5]
Thomas Brox,et al.
3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation
,
2016,
MICCAI.