Chemical force microscopy of chemical and biological interactions

Interactions between chemical functionalities define outcomes of the vast majority of important events in chemistry, biology and materials science. Chemical Force Microscopy (CFM)--a technique that uses direct chemical functionalization of AFM probes with specific functionalities--allows researchers to investigate these important interactions directly. We review the basic principles of CFM, some examples of its application, and theoretical models that provide the basis for understanding the experimental results. We also emphasize application of modern kinetic theory of non-covalent interactions strength to the analysis of CFM data.

[1]  G. Whitesides,et al.  Chemical force spectroscopy in heterogeneous systems: intermolecular interactions involving epoxy polymer, mixed monolayers, and polar solvents. , 2002, Journal of the American Chemical Society.

[2]  Aleksandr Noy,et al.  Direct determination of the equilibrium unbinding potential profile for a short DNA duplex from force spectroscopy data , 2004 .

[3]  C. Jarzynski Nonequilibrium Equality for Free Energy Differences , 1996, cond-mat/9610209.

[4]  T. Beebe,et al.  Chemical bonds studied with functionalized atomic force microscopy tips , 1995 .

[5]  J. Bechhoefer,et al.  Calibration of atomic‐force microscope tips , 1993 .

[6]  P. Kohl,et al.  Atomistic molecular dynamics simulations of chemical force microscopy. , 2003, Journal of the American Chemical Society.

[7]  R Lavery,et al.  Modelling extreme stretching of DNA. , 1996, Nucleic acids research.

[8]  R. M. Simmons,et al.  Elasticity and unfolding of single molecules of the giant muscle protein titin , 1997, Nature.

[9]  M. Chaudhury,et al.  Interfacial Lifshitz-van der Waals and polar interactions in macroscopic systems , 1988 .

[10]  D. Fuhrmann,et al.  The microscopic origins of sliding friction: a spectroscopic approach , 1999 .

[11]  K. Kendall,et al.  Surface energy and the contact of elastic solids , 1971, Proceedings of the Royal Society of London. A. Mathematical and Physical Sciences.

[12]  K. Birdi,et al.  Handbook of Surface and Colloid Chemistry , 2002 .

[13]  C. Lieber,et al.  Chemically-Sensitive Imaging in Tapping Mode by Chemical Force Microscopy: Relationship between Phase Lag and Adhesion , 1998 .

[14]  Charles M. Lieber,et al.  Chemical Force Microscopy: Exploiting Chemically-Modified Tips To Quantify Adhesion, Friction, and Functional Group Distributions in Molecular Assemblies , 1995 .

[15]  C. Quate,et al.  Forces in atomic force microscopy in air and water , 1989 .

[16]  A. Steel,et al.  Solvent Exclusion and Chemical Contrast in Scanning Force Microscopy , 1996 .

[17]  F. Ritort,et al.  Bias and error in estimates of equilibrium free-energy differences from nonequilibrium measurements , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[18]  S. Chu,et al.  Observation of a single-beam gradient force optical trap for dielectric particles. , 1986, Optics letters.

[19]  C. Bustamante,et al.  Overstretching B-DNA: The Elastic Response of Individual Double-Stranded and Single-Stranded DNA Molecules , 1996, Science.

[20]  H. Gaub,et al.  Intermolecular forces and energies between ligands and receptors. , 1994, Science.

[21]  A. Noy,et al.  Entropic barriers in nanoscale adhesion studied by variable temperature chemical force microscopy. , 2003, Journal of the American Chemical Society.

[22]  Clear,et al.  Chemical Force Microscopy Study of Adhesion and Friction between Surfaces Functionalized with Self-Assembled Monolayers and Immersed in Solvents. , 1999, Journal of colloid and interface science.

[23]  Charles M. Lieber,et al.  High-yield assembly of individual single-walled carbon nanotube tips for scanning probe microscopies , 2001 .

[24]  J. Sader,et al.  Method for the calibration of atomic force microscope cantilevers , 1995 .

[25]  H. Gaub,et al.  Dynamic single-molecule force spectroscopy: bond rupture analysis with variable spacer length , 2003 .

[26]  Gil U. Lee,et al.  Direct measurement of the forces between complementary strands of DNA. , 1994, Science.

[27]  J. Israelachvili Solvation forces and liquid structure, as probed by direct force measurements , 1987 .

[28]  M. Konrad,et al.  Molecular Dynamics Simulation of DNA Stretching Is Consistent with the Tension Observed for Extension and Strand Separation and Predicts a Novel Ladder Structure , 1996 .

[29]  Charles M. Lieber,et al.  Stretching and breaking duplex DNA by chemical force microscopy. , 1997, Chemistry & biology.

[30]  T. Nakagawa,et al.  Discriminating Molecular Length of Chemically Adsorbed Molecules Using an Atomic Force Microscope Having a Tip Covered with Sensor Molecules (An Atomic Force Microscope Having Chemical Sensing Function) , 1993 .

[31]  Okabe,et al.  Chemical force microscopy of microcontact-printed self-assembled monolayers by pulsed-force-mode atomic force microscopy , 2000, Ultramicroscopy.

[32]  E. Evans Probing the relation between force--lifetime--and chemistry in single molecular bonds. , 2001, Annual review of biophysics and biomolecular structure.

[33]  Atomic force microscope for chemical sensing , 1994 .

[34]  Julio M Fernandez,et al.  Force-Clamp Spectroscopy Monitors the Folding Trajectory of a Single Protein , 2004, Science.

[35]  O. Marti,et al.  Mapping of electrical double-layer force between tip and sample surfaces in water with pulsed-force-mode atomic force microscopy , 1997 .

[36]  Peter Hinterdorfer,et al.  Antibody recognition imaging by force microscopy , 1999, Nature Biotechnology.

[37]  Charles M. Lieber,et al.  Functional Group Imaging by Chemical Force Microscopy , 1994, Science.

[38]  W. Knoll,et al.  Distributions of functional groups in plasma polymerized allylamine films by scanning force microscopy using functionalized probe tips , 2000 .

[39]  E. Siggia,et al.  Entropic elasticity of lambda-phage DNA. , 1994, Science.

[40]  Y. Yeh,et al.  Atomic force microscope chamber for in situ studies of ice , 2001 .

[41]  P. Williams Analytical descriptions of dynamic force spectroscopy: behaviour of multiple connections , 2003 .

[42]  Jason Cleveland,et al.  Energy dissipation in tapping-mode atomic force microscopy , 1998 .

[43]  Carlos Bustamante,et al.  Grabbing the cat by the tail: manipulating molecules one by one , 2000, Nature Reviews Molecular Cell Biology.

[44]  P. Hansma,et al.  A nondestructive method for determining the spring constant of cantilevers for scanning force microscopy , 1993 .

[45]  Charles M. Lieber,et al.  Chemical Force Microscopy , 1997, Microscopy and Microanalysis.

[46]  R. Lavery,et al.  DNA: An Extensible Molecule , 1996, Science.

[47]  Forces Between Surfaces in Liquids , 1988, Science.

[48]  Charles M. Lieber,et al.  Covalently functionalized nanotubes as nanometre- sized probes in chemistry and biology , 1998, Nature.

[49]  Matthias Rief,et al.  Single Molecule Force Spectroscopy on Polysaccharides by Atomic Force Microscopy , 1997, Science.

[50]  W F Heinz,et al.  Spatially resolved force spectroscopy of biological surfaces using the atomic force microscope. , 1999, Trends in biotechnology.

[51]  H. Gaub,et al.  Force spectroscopy with single bio-molecules. , 2000, Current opinion in chemical biology.

[52]  G. Whitesides,et al.  Self-assembled organic monolayers: model systems for studying adsorption of proteins at surfaces , 1991, Science.

[53]  C. Frisbie,et al.  Rupture of Hydrophobic Microcontacts in Water: Correlation of Pull-Off Force with AFM Tip Radius , 2000 .

[54]  S. Radford,et al.  Unfolding dynamics of proteins under applied force , 2003, Philosophical Transactions of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences.

[55]  M. Salmeron,et al.  Scratching the Surface: Fundamental Investigations of Tribology with Atomic Force Microscopy. , 1997, Chemical reviews.

[56]  D. Chandler Interfaces and the driving force of hydrophobic assembly , 2005, Nature.

[57]  Holger Schönherr,et al.  Nanoscale hydrophobic recovery: A chemical force microscopy study of UV/ozone-treated cross-linked poly(dimethylsiloxane). , 2004, Langmuir : the ACS journal of surfaces and colloids.

[58]  H. Schönherr,et al.  Surface characterization of oxyfluorinated isotactic polypropylene films: scanning force microscopy with chemically modified probes and contact angle measurements , 1998 .

[59]  Emanuele Paci,et al.  Pulling geometry defines the mechanical resistance of a β-sheet protein , 2003, Nature Structural Biology.

[60]  E. Evans,et al.  Dynamic strength of molecular adhesion bonds. , 1997, Biophysical journal.

[61]  A. Noy,et al.  Chemical force microscopy: probing chemical origin of interfacial forces and adhesion , 2005 .

[62]  M. McElfresh,et al.  Force spectroscopy of the double-tethered concanavalin-A mannose bond. , 2004, Biophysical journal.

[63]  A. Noy,et al.  Determination of Energy Barriers for Intermolecular Interactions by Variable Temperature Dynamic Force Spectroscopy , 2003 .

[64]  B. Luan,et al.  The breakdown of continuum models for mechanical contacts , 2005, Nature.

[65]  Aleksandr Noy,et al.  Dynamic force spectroscopy of parallel individual Mucin1-antibody bonds. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[66]  H Schindler,et al.  Detection and localization of individual antibody-antigen recognition events by atomic force microscopy. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[67]  G. Hummer,et al.  Free energy reconstruction from nonequilibrium single-molecule pulling experiments , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[68]  Evan Evans,et al.  Dynamic Force Spectroscopy , 2002 .

[69]  H. Güntherodt,et al.  Dynamic force spectroscopy of single DNA molecules. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[70]  Charles M. Lieber,et al.  Force Titrations and Ionization State Sensitive Imaging of Functional Groups in Aqueous Solutions by Chemical Force Microscopy , 1997 .

[71]  Matthias Rief,et al.  Single molecule force spectroscopy by AFM indicates helical structure of poly(ethylene-glycol) in water , 1999 .

[72]  Calvin F. Quate,et al.  Microfabrication of cantilever styli for the atomic force microscope , 1990 .