Genotyping and interpretation of STR-DNA: Low-template, mixtures and database matches-Twenty years of research and development.
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Peter Gill | Hinda Haned | Thore Egeland | Guro Dørum | Oskar Hansson | T. Egeland | P. Gill | H. Haned | G. Dørum | Oyvind Bleka | O. Hansson | Oyvind Bleka
[1] U. Motro,et al. Can brothers share the same STR profile? , 2013, Forensic science international. Genetics.
[2] Peter Gill,et al. Population genetics of short tandem repeat (STR) loci , 2005, Genetica.
[3] Jo-Anne Bright,et al. Modelling heterozygote balance in forensic DNA profiles. , 2012, Forensic science international. Genetics.
[4] Duncan Taylor,et al. Helping formulate propositions in forensic DNA analysis. , 2014, Science & justice : journal of the Forensic Science Society.
[5] Jo-Anne Bright,et al. A comparison of statistical models for the analysis of complex forensic DNA profiles. , 2014, Science & justice : journal of the Forensic Science Society.
[6] Peter Gill,et al. Free open source software for internal validation of forensic STR typing kits , 2013 .
[7] D J Balding,et al. Evaluating DNA profile evidence when the suspect is identified through a database search. , 1996, Journal of forensic sciences.
[8] David J. Werrett,et al. The National DNA Database , 1997 .
[9] B Herrmann,et al. Optimized DNA extraction to improve reproducibility of short tandem repeat genotyping with highly degraded DNA as target , 1999, Electrophoresis.
[10] Douglas R Storts,et al. Developmental validation of the PowerPlex(®) Fusion System for analysis of casework and reference samples: A 24-locus multiplex for new database standards. , 2014, Forensic science international. Genetics.
[11] Jo-Anne Bright,et al. Examination of the variability in mixed DNA profile parameters for the Identifiler multiplex. , 2010, Forensic science international. Genetics.
[12] P Gill,et al. Development of guidelines to designate alleles using an STR multiplex system. , 1997, Forensic science international.
[13] David Van Hoofstat,et al. DNA typing of Fingerprints and Skin Debris: Sensitivity of Capillary Electrophoresis in Forensic Applications using Multiplex PCR , 1998 .
[14] J A Lambert,et al. Regional genetic variation in Caucasians. , 1998, Forensic science international.
[15] P Gill,et al. Report of the European Network of Forensic Science Institutes (ENSFI): formulation and testing of principles to evaluate STR multiplexes. , 2000, Forensic science international.
[16] R. J. Mitchell,et al. Forensic trace DNA: a review , 2010, Investigative Genetics.
[17] A. Urquhart,et al. DNA fingerprinting from single cells , 1997, Nature.
[18] P. Wiegand,et al. DNA typing of epithelial cells after strangulation , 1997, International Journal of Legal Medicine.
[19] Jo-Anne Bright,et al. Investigation into the performance of different models for predicting stutter. , 2013, Forensic science international. Genetics.
[20] Thore Egeland,et al. Models and implementation for relationship problems with dropout , 2015, International Journal of Legal Medicine.
[21] A. Urquhart,et al. Automated DNA profiling employing multiplex amplification of short tandem repeat loci. , 1993, PCR methods and applications.
[22] Jo-Anne Bright,et al. Determination of the variables affecting mixed MiniFiler™ DNA profiles. , 2011, Forensic science international. Genetics.
[23] Peter D Martin,et al. National DNA databases—practice and practicability. A forum for discussion , 2004 .
[24] W Parson,et al. Analysis of artificially degraded DNA using STRs and SNPs--results of a collaborative European (EDNAP) exercise. , 2006, Forensic science international.
[25] A. Dufour,et al. One year variability of peak heights, heterozygous balance and inter-locus balance for the DNA positive control of AmpFℓSTR© Identifiler© STR kit. , 2011, Forensic science international. Genetics.
[26] Fengzhu Sun,et al. Taq DNA polymerase slippage mutation rates measured by PCR and quasi-likelihood analysis: (CA/GT)n and (A/T)n microsatellites. , 2003, Nucleic acids research.
[27] M W Perlin,et al. Linear mixture analysis: a mathematical approach to resolving mixed DNA samples. , 2001, Journal of forensic sciences.
[28] J. Mortera,et al. Analysis of forensic DNA mixtures with artefacts , 2013, 1302.4404.
[29] H. Schmitter,et al. STR typing of human telogen hairs – a new approach , 2001, International Journal of Legal Medicine.
[30] F Taroni,et al. Recent misconceptions about the 'database search problem': a probabilistic analysis using Bayesian networks. , 2011, Forensic science international.
[31] Wing K. Fung,et al. Statistical DNA Forensics: Theory, Methods and Computation , 2008 .
[32] David Lazer,et al. Finding Criminals Through DNA of Their Relatives , 2006, Science.
[33] Titia Sijen,et al. LoCIM-tool: An expert's assistant for inferring the major contributor's alleles in mixed consensus DNA profiles. , 2014, Forensic science international. Genetics.
[34] J. Whitaker,et al. Analysis and interpretation of mixed forensic stains using DNA STR profiling. , 1998, Forensic science international.
[35] I. Evett,et al. Evidence evaluation: a response to the court of appeal judgment in R v T. , 2011, Science & justice : journal of the Forensic Science Society.
[36] R. Sparkes,et al. Validation of the AMPFlSTR SGM plus system for use in forensic casework. , 2000, Forensic science international.
[37] J M Curran,et al. Interpretation of repeat measurement DNA evidence allowing for multiple contributors and population substructure. , 2005, Forensic science international.
[38] Duncan Taylor,et al. Testing likelihood ratios produced from complex DNA profiles. , 2015, Forensic science international. Genetics.
[39] J Buckleton,et al. An investigation of the rigor of interpretation rules for STRs derived from less than 100 pg of DNA. , 2000, Forensic science international.
[40] Els Goetghebeur,et al. Impact of allelic dropout on evidential value of forensic DNA profiles using RMNE , 2008, Bioinform..
[41] M. Buoncristiani,et al. Stochastic sampling effects in STR typing: Implications for analysis and interpretation. , 2014, Forensic science international. Genetics.
[42] D. Balding,et al. Population genetics of STR loci in Caucasians , 2006, International Journal of Legal Medicine.
[43] A Stockmarr,et al. Likelihood Ratios for Evaluating DNA Evidence When the Suspect is Found Through a Database Search , 1999, Biometrics.
[44] Peter Gill,et al. A comparison of stochastic variation in mixed and unmixed casework and synthetic samples. , 2012, Forensic science international. Genetics.
[45] J Buckleton,et al. Use of DNA profiles for investigation using a simulated national DNA database: Part II. Statistical and ethical considerations on familial searching. , 2010, Forensic science international. Genetics.
[46] P. M. Schneider,et al. Criminal DNA databases: the European situation. , 2001, Forensic science international.
[47] B Budowle,et al. Population data on the thirteen CODIS core short tandem repeat loci in African Americans, U.S. Caucasians, Hispanics, Bahamians, Jamaicans, and Trinidadians. , 1999, Journal of forensic sciences.
[48] Lincoln Pj,et al. DNA RECOMMENDATIONS : FURTHER REPORT OF THE DNA COMMISSION OF THE ISFH REGARDING THE USE OF SHORT TANDEM REPEAT SYSTEMS , 1997 .
[49] F Taroni,et al. The database search problem: a question of rational decision making. , 2012, Forensic science international.
[50] Norah Rudin,et al. Analysis of allelic drop-out using the Identifiler(®) and PowerPlex(®) 16 forensic STR typing systems. , 2014, Forensic science international. Genetics.
[51] Peter Gill,et al. National recommendations of the Technical UK DNA working group on mixture interpretation for the NDNAD and for court going purposes. , 2008, Forensic science international. Genetics.
[52] John Buckleton,et al. Validation and development of interpretation guidelines for low copy number (LCN) DNA profiling in New Zealand using the AmpFlSTR SGM Plus multiplex. , 2010, Forensic science international. Genetics.
[53] J. Buckleton,et al. Forensic DNA Evidence Interpretation , 2004 .
[54] A. Kirkham,et al. Forensic validation of the PowerPlex® ESI 16 STR Multiplex and comparison of performance with AmpFlSTR® SGM Plus® , 2012, International Journal of Legal Medicine.
[55] P Taberlet,et al. Reliable genotyping of samples with very low DNA quantities using PCR. , 1996, Nucleic acids research.
[56] Russ Hoyle. The FBI's national DNA database , 1998, Nature Biotechnology.
[57] P Gill,et al. DNA commission of the International Society of Forensic Genetics: Recommendations on the evaluation of STR typing results that may include drop-out and/or drop-in using probabilistic methods. , 2012, Forensic science international. Genetics.
[58] P Gill,et al. A new methodological framework to interpret complex DNA profiles using likelihood ratios. , 2013, Forensic science international. Genetics.
[59] Duncan Taylor,et al. Developing allelic and stutter peak height models for a continuous method of DNA interpretation. , 2013, Forensic science international. Genetics.
[60] T. Tvedebrink,et al. Evaluating the weight of evidence by using quantitative short tandem repeat data in DNA mixtures , 2010 .
[61] Steffen L. Lauritzen,et al. Computational aspects of DNA mixture analysis , 2013, Statistics and Computing.
[62] A J Urquhart,et al. Primer binding site mutations affecting the typing of STR loci contained within the AMPFlSTR SGM Plus kit. , 2004, Forensic science international.
[63] Gerd Gigerenzer,et al. Communicating statistical DNA evidence , 2003 .
[64] Peter Gill,et al. On the meaning of the likelihood ratio: Is a large number always an indication of strength of evidence? , 2013 .
[65] A. Carracedo,et al. DNA recommendations , 1997, International Journal of Legal Medicine.
[66] Thore Egeland,et al. Familias 3 - Extensions and new functionality. , 2014, Forensic science international. Genetics.
[67] STR-genotyping of archaeological human bone: experimental design to improve reproducibility by optimisation of DNA extraction. , 2000, Anthropologischer Anzeiger; Bericht uber die biologisch-anthropologische Literatur.
[68] Peter Gill,et al. Interpretation of simple mixtures of when artefacts such as stutters are present : with special reference to multiplex STRs used by the forensic science service , 1998 .
[69] Niels Morling,et al. Performance of two 17 locus forensic identification STR kits-Applied Biosystems's AmpFℓSTR® NGMSElect™ and Promega's PowerPlex® ESI17 kits. , 2012, Forensic science international. Genetics.
[70] C. Strom,et al. Use of nested PCR to identify charred human remains and minute amounts of blood. , 1998, Journal of forensic sciences.
[71] B Brinkmann,et al. DNA commission of the International Society of Forensic Genetics: recommendations on forensic analysis using Y-chromosome STRs. , 2001, International journal of legal medicine.
[72] Øyvind Bleka,et al. Database extraction strategies for low-template evidence. , 2014, Forensic science international. Genetics.
[73] Simon Cowen,et al. A likelihood ratio approach to familial searching of large DNA databases , 2008 .
[74] Niels Morling,et al. New multiplexes for Europe-amendments and clarification of strategic development. , 2006, Forensic science international.
[75] M. Buoncristiani,et al. Searching for first-degree familial relationships in California's offender DNA database: validation of a likelihood ratio-based approach. , 2011, Forensic science international. Genetics.
[76] Peter Wiegand,et al. Polymerase slippage in relation to the uniformity of tetrameric repeat stretches. , 2003, Forensic science international.
[77] M. Perlin,et al. Validating TrueAllele® DNA Mixture Interpretation * ,† , 2011, Journal of forensic sciences.
[78] Peter Gill,et al. High-throughput analysis using AmpFlSTR® Identifiler® with the Applied Biosystems 3500xl Genetic Analyser. , 2013, Forensic science international. Genetics.
[79] M. Westlake,et al. The Council of the European Union , 1995 .
[80] P. Gill,et al. A rapid and quantitative DNA sex test: fluorescence-based PCR analysis of X-Y homologous gene amelogenin. , 1993, BioTechniques.
[81] P. Gill,et al. PENDULUM--a guideline-based approach to the interpretation of STR mixtures. , 2005, Forensic science international.
[82] Roberto Puch-Solis,et al. Evidential evaluation of DNA profiles using a discrete statistical model implemented in the DNA LiRa software. , 2014, Forensic science international. Genetics.
[83] D. Balding,et al. Evaluating forensic DNA profiles using peak heights, allowing for multiple donors, allelic dropout and stutters. , 2013, Forensic science international. Genetics.
[84] Hinda Haned,et al. Forensim: an open-source initiative for the evaluation of statistical methods in forensic genetics. , 2011, Forensic science international. Genetics.
[85] P. Gill,et al. Encoded evidence: DNA in forensic analysis , 2004, Nature Reviews Genetics.
[86] P Gill,et al. Does an English appeal court ruling increase the risks of miscarriages of justice when complex DNA profiles are searched against the national DNA database? , 2014, Forensic science international. Genetics.
[87] T. Clayton,et al. A genetic basis for anomalous band patterns encountered during DNA STR profiling. , 2004, Journal of forensic sciences.
[88] Dan E. Krane,et al. Magnitude-dependent variation in peak height balance at heterozygous STR loci , 2009, International Journal of Legal Medicine.
[89] Titia Sijen,et al. Assessment of the stochastic threshold, back- and forward stutter filters and low template techniques for NGM. , 2012, Forensic science international. Genetics.
[90] I. W. Evett,et al. Statistical analyses to support forensic interpretation for a new ten-locus STR profiling system , 2001, International Journal of Legal Medicine.
[91] Michael Krawczak,et al. Decision-making in familial database searching: KI alone or not alone? , 2013, Forensic science international. Genetics.
[92] Jo-Anne Bright,et al. Characterising stutter in forensic STR multiplexes. , 2012, Forensic science international. Genetics.
[93] Yue-Qing Hu,et al. Evaluation of DNA mixtures from database search. , 2010, Biometrics.
[94] Mechthild Prinz,et al. Validation of a DNA mixture statistics tool incorporating allelic drop-out and drop-in. , 2012, Forensic science international. Genetics.
[95] R. Lagacé,et al. Developmental validation of the AmpFℓSTR® NGM SElect™ PCR Amplification Kit: A next-generation STR multiplex with the SE33 locus. , 2013, Forensic science international. Genetics.
[96] John Buckleton,et al. A universal strategy to interpret DNA profiles that does not require a definition of low-copy-number. , 2010, Forensic science international. Genetics.
[97] Bruce Budowle,et al. Comparisons of Familial DNA Database Searching Strategies , 2011, Journal of forensic sciences.
[98] Catherine M Grgicak,et al. Maximizing allele detection: Effects of analytical threshold and DNA levels on rates of allele and locus drop-out. , 2012, Forensic science international. Genetics.
[99] John M. Butler,et al. U.S. initiatives to strengthen forensic science & international standards in forensic DNA , 2015, Forensic science international. Genetics.
[100] David J. Balding,et al. Statistical Evaluation of Forensic DNA Profile Evidence , 2014 .
[101] Thore Egeland,et al. The DNA database search controversy revisited: bridging the Bayesian-frequentist gap. , 2007, Biometrics.
[102] H Haned,et al. Exploratory data analysis for the interpretation of low template DNA mixtures. , 2012, Forensic science international. Genetics.
[103] Andrew J Gibb,et al. Characterisation of forward stutter in the AmpFlSTR SGM Plus PCR. , 2009, Science & justice : journal of the Forensic Science Society.
[104] P Gill,et al. Euroforgen-NoE collaborative exercise on LRmix to demonstrate standardization of the interpretation of complex DNA profiles. , 2014, Forensic science international. Genetics.
[105] Peter Gill,et al. Development of a simulation model to assess the impact of contamination in casework using STRs. , 2004, Journal of forensic sciences.
[106] Benoît Leclair,et al. Systematic analysis of stutter percentages and allele peak height and peak area ratios at heterozygous STR loci for forensic casework and database samples. , 2004, Journal of forensic sciences.
[107] James Curran,et al. A graphical simulation model of the entire DNA process associated with the analysis of short tandem repeat loci , 2005, Nucleic acids research.
[108] D J Balding,et al. DNA profile match probability calculation: how to allow for population stratification, relatedness, database selection and single bands. , 1994, Forensic science international.
[109] P. Gill,et al. Report of the European DNA profiling group (EDNAP): an investigation of the complex STR loci D21S11 and HUMFIBRA (FGA). , 1997, Forensic science international.
[110] Simon French. A forum for discussion , 1996 .
[111] Niels Morling,et al. Identifying Contributors of DNA Mixtures by Means of Quantitative Information of STR Typing , 2012, J. Comput. Biol..
[112] B. Brinkmann,et al. Allgemeine Empfehlungen der Spurenkommission zur statistischen Bewertung von DNA-Datenbank-Treffern , 2010, Rechtsmedizin.
[113] S. Hummel,et al. DNA preservation: A microsatellite‐DNA study on ancient skeletal remains , 1999, Electrophoresis.
[114] J. Murray,et al. Tetranucleotide repeat polymorphism at the human alpha fibrinogen locus (FGA). , 1992, Human molecular genetics.
[115] Chris Phillips,et al. Forensic genetic analysis of bio-geographical ancestry. , 2015, Forensic science international. Genetics.
[116] Peter Gill,et al. A comparison of adjustment methods to test the robustness of an STR DNA database comprised of 24 European populations. , 2003, Forensic science international.
[117] Duncan Taylor,et al. The interpretation of single source and mixed DNA profiles. , 2013, Forensic science international. Genetics.
[118] I W Evett,et al. Evaluating DNA profiles in a case where the defence is "it was my brother". , 1992, Journal - Forensic Science Society.
[119] Niels Morling,et al. The evolution of DNA databases--recommendations for new European STR loci. , 2006, Forensic science international.
[120] Jonathan Whitaker,et al. Interpretation of complex DNA profiles using empirical models and a method to measure their robustness. , 2008, Forensic science international. Genetics.
[121] J Buckleton,et al. Use of DNA profiles for investigation using a simulated national DNA database: Part I. Partial SGM Plus profiles. , 2010, Forensic science international. Genetics.
[122] J. Herbergs,et al. A stochastic model of the processes in PCR based amplification of STR DNA in forensic applications. , 2012, Forensic science international. Genetics.
[123] Douglas R. Hares,et al. Addendum to expanding the CODIS core loci in the United States , 2012 .
[124] Ronald Meester,et al. Probabilistic strategies for familial DNA searching , 2014 .
[125] P. Gill,et al. Identification of the remains of the Romanov family by DNA analysis , 1994, Nature Genetics.
[126] Niels Morling,et al. Estimating the probability of allelic drop-out of STR alleles in forensic genetics. , 2009, Forensic science international. Genetics.
[127] D. Balding. Evaluation of mixed-source, low-template DNA profiles in forensic science , 2013, Proceedings of the National Academy of Sciences.
[128] N. Sheehan,et al. Mixtures with relatives: a pedigree perspective. , 2014, Forensic science international. Genetics.
[129] Wing Kam Fung,et al. Familial database search on two-person mixture , 2010, Comput. Stat. Data Anal..
[130] James Curran,et al. Searching mixed DNA profiles directly against profile databases. , 2014, Forensic science international. Genetics.
[131] Peter Gill,et al. Misleading DNA Evidence: Reasons for Miscarriages of Justice , 2014 .
[132] R. Meester,et al. The Evidential Value in the DNA Database Search Controversy and the Two‐Stain Problem , 2003, Biometrics.
[133] Wim Wiegerinck,et al. Bayesian networks for victim identification on the basis of DNA profiles , 2009 .
[134] Jo-Anne Bright,et al. Variability of mixed DNA profiles separated on a 3130 and 3500 capillary electrophoresis instrument , 2014 .
[135] Øyvind Bleka,et al. Exact computation of the distribution of likelihood ratios with forensic applications. , 2014, Forensic science international. Genetics.
[136] James Curran,et al. LoComatioN: a software tool for the analysis of low copy number DNA profiles. , 2007, Forensic science international.
[137] G. Gutman,et al. Slipped-strand mispairing: a major mechanism for DNA sequence evolution. , 1987, Molecular biology and evolution.
[138] P. Walsh,et al. Sequence analysis and characterization of stutter products at the tetranucleotide repeat locus vWA. , 1996, Nucleic acids research.
[139] Niels Morling,et al. Analysis of matches and partial-matches in a Danish STR data set. , 2012, Forensic science international. Genetics.
[140] Douglas R Storts,et al. Concordance and population studies along with stutter and peak height ratio analysis for the PowerPlex ® ESX 17 and ESI 17 Systems. , 2011, Forensic science international. Genetics.
[141] Bruce Budowle,et al. Developing criteria and data to determine best options for expanding the core CODIS loci , 2012, Investigative Genetics.
[142] Christina Widén,et al. Comments on "The database search problem" with respect to a recent publication in Forensic Science International. , 2012, Forensic science international.
[143] Johannes Hedman,et al. Verification of alleles by using peak height thresholds and quality control of STR profiling kits , 2011 .
[144] Peter Gill,et al. STR-validator: an open source platform for validation and process control. , 2014, Forensic science international. Genetics.
[145] William R Hudlow,et al. A quadruplex real-time qPCR assay for the simultaneous assessment of total human DNA, human male DNA, DNA degradation and the presence of PCR inhibitors in forensic samples: a diagnostic tool for STR typing. , 2008, Forensic science international. Genetics.
[146] Holger Wittig,et al. Forensic mass screening using mtDNA , 2006, International Journal of Legal Medicine.
[147] M. Kruijver. Efficient computations with the likelihood ratio distribution. , 2015, Forensic science international. Genetics.
[148] Douglas R Hares,et al. Expanding the CODIS core loci in the United States. , 2012, Forensic science international. Genetics.
[149] Michael D Coble,et al. Characterization of new miniSTR loci to aid analysis of degraded DNA. , 2005, Journal of forensic sciences.
[150] W R Mayr,et al. DNA commission of the International Society of Forensic Genetics: Recommendations on the interpretation of mixtures. , 2006, Forensic science international.
[151] C Kimpton,et al. Report on the second EDNAP collaborative STR exercise. European DNA Profiling Group. , 1995, Forensic science international.
[152] W R Mayr,et al. DNA Commission of the International Society of Forensic Genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis , 2006, International Journal of Legal Medicine.
[153] P Gill,et al. A comparison of the characteristics of profiles produced with the AMPFlSTR SGM Plus multiplex system for both standard and low copy number (LCN) STR DNA analysis. , 2001, Forensic science international.
[154] Klaas Slooten,et al. p-values should not be used for evaluating the strength of DNA evidence. , 2015, Forensic science international. Genetics.
[155] Coral Luce,et al. Validation of the AMPFℓSTR® MiniFilerTM PCR Amplification Kit for Use in Forensic Casework * , 2009, Journal of forensic sciences.
[156] Niels Morling,et al. Allelic drop-out probabilities estimated by logistic regression--further considerations and practical implementation. , 2012, Forensic science international. Genetics.
[157] W Parson,et al. European Network of Forensic Science Institutes (ENFSI): Evaluation of new commercial STR multiplexes that include the European Standard Set (ESS) of markers. , 2012, Forensic science international. Genetics.
[158] Bruce Budowle,et al. Reduction of stutter ratios in short tandem repeat loci typing of low copy number DNA samples. , 2014, Forensic science international. Genetics.
[159] B S Weir,et al. Issues and strategies in the DNA identification of World Trade Center victims. , 2003, Theoretical population biology.
[160] James Curran,et al. The low-template-DNA (stochastic) threshold--its determination relative to risk analysis for national DNA databases. , 2009, Forensic science international. Genetics.
[161] John Buckleton,et al. Dealing with allelic dropout when reporting the evidential value in DNA relatedness analysis. , 2006, Forensic science international.
[162] T. Zupanc,et al. Highly efficient nuclear DNA typing of the World War II skeletal remains using three new autosomal short tandem repeat amplification kits with the extended European Standard Set of loci , 2012, Croatian medical journal.