Evaluation of statistical and Haralick texture features for lymphoma histological images classification

ABSTRACT The investigation of different types of cancer can be performed by images classification with features extracted from specific regions identified by a segmentation step. Therefore, this study presents the evaluation of texture features extracted from neoplastic nuclei for the classification of lymphomas images. The neoplastic nuclei were segmented by steps of pre and post-processing and a thresholding. Statistical and Haralick’s features extracted from wavelet and ranklet transforms were evaluated with different classifiers. The use of the statistical metrics from the wavelet transform in association with the K-nearest neighbour classifier provided the best results in most of the two-class classifications.

[1]  Shanu Sharma,et al.  Automatic Classification of Non Hodgkin‘s Lymphoma using Histological Images: Recent Advances and Directions , 2018, 2018 International Conference on Advances in Computing, Communication Control and Networking (ICACCCN).

[2]  Alessandro Santana Martins,et al.  Features based on the percolation theory for quantification of non-Hodgkin lymphomas , 2017, Comput. Biol. Medicine.

[3]  Lior Shamir,et al.  IICBU 2008: a proposed benchmark suite for biological image analysis , 2008, Medical & Biological Engineering & Computing.

[4]  Metin Nafi Gürcan,et al.  A general framework for the segmentation of follicular lymphoma virtual slides , 2012, Comput. Medical Imaging Graph..

[5]  Alessandro Santana Martins,et al.  Colour Feature Extraction and Polynomial Algorithm for Classification of Lymphoma Images , 2019, CIARP.

[6]  Cecilia Di Ruberto,et al.  Histological Image Analysis by Invariant Descriptors , 2017, ICIAP.

[7]  Wilfrido Gómez-Flores,et al.  Detection of Huanglongbing disease based on intensity-invariant texture analysis of images in the visible spectrum , 2019, Comput. Electron. Agric..

[8]  Nelson Martins,et al.  Automatic microaneurysm detection using laws texture masks and support vector machines , 2018, Comput. methods Biomech. Biomed. Eng. Imaging Vis..

[9]  Konstantinos N. Plataniotis,et al.  A Complete Color Normalization Approach to Histopathology Images Using Color Cues Computed From Saturation-Weighted Statistics , 2015, IEEE Transactions on Biomedical Engineering.

[10]  Leandro Alves Neves,et al.  Classification of Histological Images Based on the Stationary Wavelet Transform , 2015 .

[11]  Daniel Riccio,et al.  A Deep Learning Approach for Breast Invasive Ductal Carcinoma Detection and Lymphoma Multi-Classification in Histological Images , 2019, IEEE Access.

[12]  John R. Smith,et al.  Lymphoma diagnosis in histopathology using a multi-stage visual learning approach , 2016, SPIE Medical Imaging.

[13]  Metin Nafi Gürcan,et al.  Computer-Aided Detection of Centroblasts for Follicular Lymphoma Grading Using Adaptive Likelihood-Based Cell Segmentation , 2010, IEEE Transactions on Biomedical Engineering.

[14]  Heng Huang,et al.  Bioimage classification with subcategory discriminant transform of high dimensional visual descriptors , 2016, BMC Bioinformatics.

[15]  Nancy Hitschfeld-Kahler,et al.  Gold-standard and improved framework for sperm head segmentation , 2014, Comput. Methods Programs Biomed..

[16]  Nasir M. Rajpoot,et al.  A Nonlinear Mapping Approach to Stain Normalization in Digital Histopathology Images Using Image-Specific Color Deconvolution , 2014, IEEE Transactions on Biomedical Engineering.

[17]  Xutao Li,et al.  A Deep Learning Approach to Nightfire Detection based on Low-Light Satellite , 2021, Computer Science & Information Technology (CS & IT).

[18]  Hui-Fuang Ng Automatic thresholding for defect detection , 2006, Pattern Recognit. Lett..

[19]  Víctor H. Andaluz,et al.  Automatic detection of injuries in mammograms using image analysis techniques , 2015, 2015 International Conference on Systems, Signals and Image Processing (IWSSIP).

[20]  Wasfy B. Mikhael,et al.  Facial Recognition System Employing Transform Implementations of Sparse Representation Method , 2019, 2019 IEEE 62nd International Midwest Symposium on Circuits and Systems (MWSCAS).

[21]  Alessandro Santana Martins,et al.  Analysis of the Influence of Color Normalization in the Classification of Non-Hodgkin Lymphoma Images , 2018, SIBGRAPI.

[22]  Yuri Shprits,et al.  Reconstruction of Plasma Electron Density From Satellite Measurements Via Artificial Neural Networks , 2018 .

[23]  J. Hornaday,et al.  Cancer Facts & Figures 2004 , 2004 .

[24]  Shu-Ching Chen,et al.  Histology Image Classification Using Supervised Classification and Multimodal Fusion , 2010, 2010 IEEE International Symposium on Multimedia.

[25]  Erik Cuevas,et al.  Image Segmentation Based on Differential Evolution Optimization , 2016 .

[26]  V. Vaithiyanathan,et al.  Image Segmentation Based on , 2014 .

[27]  H. Irshad,et al.  Methods for Nuclei Detection, Segmentation, and Classification in Digital Histopathology: A Review—Current Status and Future Potential , 2014, IEEE Reviews in Biomedical Engineering.

[28]  Alessandro Santana Martins,et al.  Lymphoma images analysis using morphological and non-morphological descriptors for classification , 2018, Comput. Methods Programs Biomed..

[29]  Nourhan Zayed,et al.  Statistical Analysis of Haralick Texture Features to Discriminate Lung Abnormalities , 2015, Int. J. Biomed. Imaging.

[30]  Weixing Wang,et al.  Efficient multilevel image segmentation through fuzzy entropy maximization and graph cut optimization , 2014, Pattern Recognit..

[31]  Lawrence O. Hall,et al.  Nucleus segmentation in histology images with hierarchical multilevel thresholding , 2016, SPIE Medical Imaging.

[32]  Elaine B. Martin,et al.  Segmentation of epidermal tissue with histopathological damage in images of haematoxylin and eosin stained human skin , 2014, BMC Medical Imaging.

[33]  José Alberto Quintanilha Processamento de imagens digitais , 1990 .

[34]  J Rittscher,et al.  Digitally adjusting chromogenic dye proportions in brightfield microscopy images , 2012, Journal of microscopy.

[35]  Xiaoqi Ma,et al.  NHL Pathological Image Classification Based on Hierarchical Local Information and GoogLeNet-Based Representations , 2019, BioMed research international.

[36]  Nikolaos Grammalidis,et al.  Automated detection and classification of nuclei in PAX5 and H&E-stained tissue sections of follicular lymphoma , 2017, Signal Image Video Process..

[37]  Cecilia Di Ruberto,et al.  On Different Colour Spaces for Medical Colour Image Classification , 2015, CAIP.

[38]  Timothy A. Warner,et al.  Implementation of machine-learning classification in remote sensing: an applied review , 2018 .

[39]  Jong-Seok Lee,et al.  Incorporating receiver operating characteristics into naive Bayes for unbalanced data classification , 2017, Computing.

[40]  Tom Fawcett,et al.  An introduction to ROC analysis , 2006, Pattern Recognit. Lett..

[41]  Lorenzo Putzu,et al.  A Feature Learning Framework for Histology Images Classification , 2016 .

[42]  Vikram Pakrashi,et al.  Automated Segmentation of Nuclei in Breast Cancer Histopathology Images , 2016, PloS one.

[43]  Vahid Azimi,et al.  Deep learning based Nucleus Classification in pancreas histological images , 2017, 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

[44]  Thaína Aparecida Azevedo Tosta,et al.  Avaliação de Atributos de Textura de Núcleos Neoplásicos para a Classificação de Imagens Histológicas de Linfoma , 2017 .

[45]  Patrick Siarry,et al.  A multilevel automatic thresholding method based on a genetic algorithm for a fast image segmentation , 2008, Comput. Vis. Image Underst..

[46]  Jayasooriah,et al.  Image analysis of tissue sections , 1996, Comput. Biol. Medicine.

[47]  J. Winter The Lymphomas , 1998, Annals of Internal Medicine.

[48]  I. König,et al.  What is precision medicine? , 2017, European Respiratory Journal.

[49]  Robert M. Haralick,et al.  Textural Features for Image Classification , 1973, IEEE Trans. Syst. Man Cybern..

[50]  Ognjen Arandjelovic,et al.  Precision medicine in digital pathology via image analysis and machine learning , 2021 .

[51]  Lior Shamir,et al.  Automatic Classification of Lymphoma Images With Transform-Based Global Features , 2010, IEEE Transactions on Information Technology in Biomedicine.

[52]  Asok Kumar Maiti,et al.  Automatic identification of clinically relevant regions from oral tissue histological images for oral squamous cell carcinoma diagnosis. , 2018, Tissue & cell.

[53]  Stefano Ghidoni,et al.  Ensemble of convolutional neural networks for bioimage classification , 2020, Applied Computing and Informatics.

[54]  Yongming Li,et al.  Automatic cell nuclei segmentation and classification of breast cancer histopathology images , 2016, Signal Process..