A putative house‐cleaning enzyme encoded within an integron array: 1.8 Å crystal structure defines a new MazG subtype
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Yan Boucher | Paul M G Curmi | Bridget C Mabbutt | Andrew Robinson | Y. Boucher | S. Harrop | H W Stokes | H. Stokes | Amy P Guilfoyle | Stephen J Harrop | Andrew Robinson | Stephen J. Harrop | Paul M. G. Curmi | Amy P. Guilfoyle | Bridget C. Mabbutt
[1] A Vagin,et al. An approach to multi-copy search in molecular replacement. , 2000, Acta crystallographica. Section D, Biological crystallography.
[2] Randy J Read,et al. Electronic Reprint Biological Crystallography Likelihood-enhanced Fast Translation Functions Biological Crystallography Likelihood-enhanced Fast Translation Functions , 2022 .
[3] W. Doolittle,et al. Lateral gene transfer and the origins of prokaryotic groups. , 2003, Annual review of genetics.
[4] G. Glaser,et al. MazG – a regulator of programmed cell death in Escherichia coli , 2006, Molecular microbiology.
[5] G. Murshudov,et al. Refinement of macromolecular structures by the maximum-likelihood method. , 1997, Acta crystallographica. Section D, Biological crystallography.
[6] R. Hall,et al. Integrons: Novel DNA elements which capture genes by site-specific recombination , 2005, Genetica.
[7] Hervé Philippe,et al. Horizontal gene transfer and phylogenetics. , 2003, Current opinion in microbiology.
[8] Yan Boucher,et al. Integrons: mobilizable platforms that promote genetic diversity in bacteria. , 2007, Trends in microbiology.
[9] Kevin Cowtan,et al. research papers Acta Crystallographica Section D Biological , 2005 .
[10] Michael Y. Galperin,et al. House cleaning, a part of good housekeeping , 2006, Molecular microbiology.
[11] V S Lamzin,et al. Automated refinement of protein models. , 1993, Acta crystallographica. Section D, Biological crystallography.
[12] Didier Mazel,et al. Integrons: agents of bacterial evolution , 2006, Nature Reviews Microbiology.
[13] M. Kanehisa. A database for post-genome analysis. , 1997, Trends in genetics : TIG.
[14] A. McLennan,et al. The Nudix hydrolase superfamily , 2005, Cellular and Molecular Life Sciences CMLS.
[15] Bi Cheng Wang,et al. On increasing protein-crystallization throughput for X-ray diffraction studies. , 2005, Acta crystallographica. Section D, Biological crystallography.
[16] Fabiano L. Thompson,et al. Biodiversity of Vibrios , 2004, Microbiology and Molecular Biology Reviews.
[17] R M Hall,et al. Site‐specific insertion of gene cassettes into integrons , 1993, Molecular microbiology.
[18] K. Katoh,et al. MAFFT version 5: improvement in accuracy of multiple sequence alignment , 2005, Nucleic acids research.
[19] W. Delano. The PyMOL Molecular Graphics System , 2002 .
[20] M. Inouye,et al. MazG, a Nucleoside Triphosphate Pyrophosphohydrolase, Interacts with Era, an Essential GTPase in Escherichia coli , 2002, Journal of bacteriology.
[21] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[22] K. M. Helena Nevalainen,et al. Gene Cassette PCR: Sequence-Independent Recovery of Entire Genes from Environmental DNA , 2001, Applied and Environmental Microbiology.
[23] F. Studier,et al. Protein production by auto-induction in high density shaking cultures. , 2005, Protein expression and purification.
[24] R M Hall,et al. Gene cassettes: a new class of mobile element. , 1995, Microbiology.
[25] M. Inouye,et al. Thermotoga maritima MazG Protein Has Both Nucleoside Triphosphate Pyrophosphohydrolase and Pyrophosphatase Activities* , 2003, Journal of Biological Chemistry.
[26] Robert S. Ledley,et al. PIRSF: family classification system at the Protein Information Resource , 2004, Nucleic Acids Res..
[27] K. Braeken,et al. New horizons for (p)ppGpp in bacterial and plant physiology. , 2006, Trends in microbiology.
[28] R. Hall,et al. A novel family of potentially mobile DNA elements encoding site‐specific gene‐integration functions: integrons , 1989, Molecular microbiology.
[29] Blair S Nield,et al. The gene cassette metagenome is a basic resource for bacterial genome evolution. , 2003, Environmental microbiology.
[30] W. Doolittle,et al. Recovery and evolutionary analysis of complete integron gene cassette arrays from Vibrio , 2006, BMC Evolutionary Biology.
[31] Michael Y. Galperin,et al. Dimeric dUTPases, HisE, and MazG belong to a new superfamily of all-alpha NTP pyrophosphohydrolases with potential "house-cleaning" functions. , 2005, Journal of molecular biology.
[32] Qiang Zhao,et al. Crystal structure of RS21-C6, involved in nucleoside triphosphate pyrophosphohydrolysis. , 2007, Journal of molecular biology.
[33] D. Mazel,et al. Comparative analysis of superintegrons: engineering extensive genetic diversity in the Vibrionaceae. , 2003, Genome research.
[34] Collaborative Computational,et al. The CCP4 suite: programs for protein crystallography. , 1994, Acta crystallographica. Section D, Biological crystallography.
[35] J. Thornton,et al. PROCHECK: a program to check the stereochemical quality of protein structures , 1993 .
[36] Michael Y. Galperin,et al. The crystal structure of a complex of Campylobacter jejuni dUTPase with substrate analogue sheds light on the mechanism and suggests the "basic module" for dimeric d(C/U)TPases. , 2004, Journal of molecular biology.
[37] H. Ochman,et al. Lateral gene transfer and the nature of bacterial innovation , 2000, Nature.