Annals of Clinical Microbiology and Antimicrobials Open Access Predicting the Sensitivity and Specificity of Published Real-time Pcr Assays

[1]  Adam M. Phillippy,et al.  Comprehensive DNA Signature Discovery and Validation , 2007, PLoS Comput. Biol..

[2]  M. Zambon,et al.  Design and Validation of an H5 TaqMan Real-Time One-Step Reverse Transcription-PCR and Confirmatory Assays for Diagnosis and Verification of Influenza A Virus H5 Infections in Humans , 2007, Journal of Clinical Microbiology.

[3]  N. Ghebranious,et al.  A LightCycler TaqMan assay for detection of Borrelia burgdorferi sensu lato in clinical samples. , 2007, Diagnostic microbiology and infectious disease.

[4]  G. Chang,et al.  Development of Multiplex Real-Time Reverse Transcriptase PCR Assays for Detecting Eight Medically Important Flaviviruses in Mosquitoes , 2006, Journal of Clinical Microbiology.

[5]  G. Chang,et al.  Development of Real-Time Reverse Transcriptase PCR Assays To Detect and Serotype Dengue Viruses , 2006, Journal of Clinical Microbiology.

[6]  W. Bellini,et al.  Development of quantitative gene-specific real-time RT-PCR assays for the detection of measles virus in clinical specimens. , 2006, Journal of virological methods.

[7]  T. F. Smith,et al.  Real-Time PCR in Clinical Microbiology: Applications for Routine Laboratory Testing , 2006, Clinical Microbiology Reviews.

[8]  Yi-Wei Tang,et al.  Detection of medically important Ehrlichia by quantitative multicolor TaqMan real-time polymerase chain reaction of the dsb gene. , 2005, The Journal of molecular diagnostics : JMD.

[9]  A. Wald,et al.  Differentiation of herpes simplex virus types 1 and 2 in clinical samples by a real‐time taqman PCR assay , 2005, Journal of medical virology.

[10]  Xavier Anglaret,et al.  Transfer and Evaluation of an Automated, Low-Cost Real-Time Reverse Transcription-PCR Test for Diagnosis and Monitoring of Human Immunodeficiency Virus Type 1 Infection in a West African Resource-Limited Setting , 2005, Journal of Clinical Microbiology.

[11]  R. Hondo,et al.  Rapid and sensitive detection of mumps virus RNA directly from clinical samples by real‐time PCR , 2005, Journal of medical virology.

[12]  Shea N. Gardner,et al.  Sequencing Needs for Viral Diagnostics , 2004, Journal of Clinical Microbiology.

[13]  D. Hober,et al.  Coxsackievirus B4 Infection of Human Fetal Thymus Cells , 2004, Journal of Virology.

[14]  J. Yuenger,et al.  Use of Applied Biosystems 7900HT Sequence Detection System and Taqman Assay for Detection of Quinolone-Resistant Neisseria gonorrhoeae , 2004, Journal of Clinical Microbiology.

[15]  H. Piiparinen,et al.  Comparison of two quantitative CMV PCR tests, Cobas Amplicor CMV Monitor and TaqMan assay, and pp65-antigenemia assay in the determination of viral loads from peripheral blood of organ transplant patients. , 2004, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.

[16]  Manfred Weidmann,et al.  Rapid detection protocol for filoviruses. , 2004, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.

[17]  U. Reischl,et al.  Algorithm for the identification of bacterial pathogens in positive blood cultures by real-time LightCycler polymerase chain reaction (PCR) with sequence-specific probes. , 2004, Diagnostic microbiology and infectious disease.

[18]  J. Oosterheert,et al.  Frequent Detection of Human Coronaviruses in Clinical Specimens from Patients with Respiratory Tract Infection by Use of a Novel Real-Time Reverse-Transcriptase Polymerase Chain Reaction , 2004, The Journal of infectious diseases.

[19]  P. Carmeliet,et al.  The Interferon Inducer Ampligen [Poly(I)-Poly(C12U)] Markedly Protects Mice against Coxsackie B3 Virus-Induced Myocarditis , 2004, Antimicrobial Agents and Chemotherapy.

[20]  D. Suarez,et al.  Development of a Real-Time Reverse-Transcription PCR for Detection of Newcastle Disease Virus RNA in Clinical Samples , 2004, Journal of Clinical Microbiology.

[21]  F. Watzinger,et al.  Real-Time Quantitative PCR Assays for Detection and Monitoring of Pathogenic Human Viruses in Immunosuppressed Pediatric Patients , 2004 .

[22]  Thomas A. Kuczmarski,et al.  Limitations of TaqMan PCR for Detecting Divergent Viral Pathogens Illustrated by Hepatitis A, B, C, and E Viruses and Human Immunodeficiency Virus , 2003, Journal of Clinical Microbiology.

[23]  Adam Zemla,et al.  Comparative Genomics Tools Applied to Bioterrorism Defence , 2003, Briefings Bioinform..

[24]  I. Kurane [Japanese encephalitis virus]. , 2003, Nihon rinsho. Japanese journal of clinical medicine.

[25]  P. Apfalter,et al.  Comparison of a New Quantitative ompA-Based Real-Time PCR TaqMan Assay for Detection of Chlamydia pneumoniae DNA in Respiratory Specimens with Four Conventional PCR Assays , 2003, Journal of Clinical Microbiology.

[26]  J. Patrick Fitch,et al.  Rapid development of nucleic acid diagnostics , 2002, Proc. IEEE.

[27]  Christian Drosten,et al.  Rapid Detection and Quantification of RNA of Ebola and Marburg Viruses, Lassa Virus, Crimean-Congo Hemorrhagic Fever Virus, Rift Valley Fever Virus, Dengue Virus, and Yellow Fever Virus by Real-Time Reverse Transcription-PCR , 2002, Journal of Clinical Microbiology.

[28]  J. Mackenzie,et al.  Japanese Encephalitis Virus , 2002 .

[29]  M. Kockx,et al.  Rapid Detection of Enterovirus RNA in Cerebrospinal Fluid Specimens with a Novel Single-Tube Real-Time Reverse Transcription-PCR Assay , 2001, Journal of Clinical Microbiology.

[30]  J. Roehrig,et al.  Rapid Detection of West Nile Virus from Human Clinical Specimens, Field-Collected Mosquitoes, and Avian Samples by a TaqMan Reverse Transcriptase-PCR Assay , 2000, Journal of Clinical Microbiology.

[31]  R. D. de Man,et al.  Development of a Quantitative Real-Time Detection Assay for Hepatitis B Virus DNA and Comparison with Two Commercial Assays , 2000, Journal of Clinical Microbiology.

[32]  F. Tenover,et al.  A 5′ Nuclease PCR (TaqMan) High-Throughput Assay for Detection of the mecA Gene in Staphylococci , 2000, Journal of Clinical Microbiology.

[33]  E. Wiedenmann,et al.  Sensitive and accurate quantitation of hepatitis B virus DNA using a kinetic fluorescence detection system (TaqMan PCR). , 2000, Journal of virological methods.

[34]  J. Breuer,et al.  Development of a flurogenic polymerase chain reaction assay (TaqMan) for the detection and quantitation of varicella zoster virus , 1999 .

[35]  B. Robertson,et al.  Rapid reverse transcription-PCR detection of hepatitis C virus RNA in serum by using the TaqMan fluorogenic detection system , 1996, Journal of clinical microbiology.

[36]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.