The complete genome sequence of the yogurt isolate Streptococcus thermophilus ACA-DC 2
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[1] Alexander Goesmann,et al. EDGAR 2.0: an enhanced software platform for comparative gene content analyses , 2016, Nucleic Acids Res..
[2] Sudhir Kumar,et al. MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. , 2016, Molecular biology and evolution.
[3] Robert D. Finn,et al. The Pfam protein families database: towards a more sustainable future , 2015, Nucleic Acids Res..
[4] Davide Heller,et al. eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences , 2015, Nucleic Acids Res..
[5] G. Garrity,et al. List of new names and new combinations previously effectively, but not validly, published. , 2016, International journal of systematic and evolutionary microbiology.
[6] G. Garrity,et al. The Road Map to the Manual , 2015 .
[7] Matthew R. Laird,et al. IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis , 2015, Nucleic Acids Res..
[8] B. Pot,et al. How microbes adapt to a diversity of food niches , 2015 .
[9] K. Schleifer,et al. Bacilli class. nov. , 2015 .
[10] G. Chennappa,et al. Probiotic Potential of Lactobacillus Strains Isolated from Sorghum-Based Traditional Fermented Food , 2015, Probiotics and Antimicrobial Proteins.
[11] Richard J. Roberts,et al. REBASE—a database for DNA restriction and modification: enzymes, genes and genomes , 2009, Nucleic Acids Res..
[12] W. Pirovano,et al. SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information , 2014, BMC Bioinformatics.
[13] Vineet K. Sharma,et al. MP3: A Software Tool for the Prediction of Pathogenic Proteins in Genomic and Metagenomic Data , 2014, PloS one.
[14] F. Rossi,et al. Diversity of Streptococcus thermophilus in bacteriocin production; inhibitory spectrum and occurrence of thermophilin genes. , 2013, Food microbiology.
[15] W. Krzyściak,et al. The pathogenicity of the Streptococcus genus , 2013, European Journal of Clinical Microbiology & Infectious Diseases.
[16] Oscar P. Kuipers,et al. BAGEL3: automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides , 2013, Nucleic Acids Res..
[17] Amrutlal K. Patel,et al. Genomic analysis of dairy starter culture Streptococcus thermophilus MTCC 5461. , 2013, Journal of microbiology and biotechnology.
[18] V. Solovyev,et al. Automatic Annotation of Microbial Genomes and Metagenomic Sequences 3 MATERIAL AND METHODS Learning Parameters and Prediction of Protein-Coding Genes , 2013 .
[19] Glenn Tesler,et al. Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory , 2012, BMC Bioinformatics.
[20] W. Pirovano,et al. Toward almost closed genomes with GapFiller , 2012, Genome Biology.
[21] G. Garrity. Bergey’s Manual® of Systematic Bacteriology , 2012, Springer New York.
[22] Sitao Wu,et al. WebMGA: a customizable web server for fast metagenomic sequence analysis , 2011, BMC Genomics.
[23] Sarah O’Flaherty,et al. Specialized adaptation of a lactic acid bacterium to the milk environment: the comparative genomics of Streptococcus thermophilus LMD-9 , 2011, Microbial cell factories.
[24] Robert W. Li. Metagenomics and Its Applications in Agriculture, Biomedicine and Environmental Studies , 2011 .
[25] He Meng,et al. Complete Genome Sequence of Streptococcus thermophilus Strain ND03 , 2010, Journal of bacteriology.
[26] Nikos Darzentas,et al. Circoletto: visualizing sequence similarity with Circos , 2010, Bioinform..
[27] Natalia N. Ivanova,et al. GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes , 2010, Nature Methods.
[28] Rameshwar Singh,et al. Streptococcus thermophilus strains: Multifunctional lactic acid bacteria , 2010 .
[29] Miriam L. Land,et al. Trace: Tennessee Research and Creative Exchange Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification Recommended Citation Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification , 2022 .
[30] D. Crook,et al. Genomic islands: tools of bacterial horizontal gene transfer and evolution , 2008, FEMS microbiology reviews.
[31] T. Itoh,et al. MetaGeneAnnotator: Detecting Species-Specific Patterns of Ribosomal Binding Site for Precise Gene Prediction in Anonymous Prokaryotic and Phage Genomes , 2008, DNA research : an international journal for rapid publication of reports on genes and genomes.
[32] Chris F. Taylor,et al. The minimum information about a genome sequence (MIGS) specification , 2008, Nature Biotechnology.
[33] Paul Stothard,et al. The CGView Server: a comparative genomics tool for circular genomes , 2008, Nucleic Acids Res..
[34] Philippe Horvath,et al. Diversity, Activity, and Evolution of CRISPR Loci in Streptococcus thermophilus , 2007, Journal of bacteriology.
[35] J. Euzéby. List of new names and new combinations previously effectively, but not validly, published. , 2008, International journal of systematic and evolutionary microbiology.
[36] Rick L. Stevens,et al. The RAST Server: Rapid Annotations using Subsystems Technology , 2008, BMC Genomics.
[37] Ibtissem Grissa,et al. CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats , 2007, Nucleic Acids Res..
[38] Erik L. L. Sonnhammer,et al. Advantages of combined transmembrane topology and signal peptide prediction—the Phobius web server , 2007, Nucleic Acids Res..
[39] M. Kojić,et al. Potential of lactic acid bacteria isolated from specific natural niches in food production and preservation. , 2006, International journal of food microbiology.
[40] Laetitia Fontaine,et al. New insights in the molecular biology and physiology of Streptococcus thermophilus revealed by comparative genomics. , 2005, FEMS microbiology reviews.
[41] T. Hansen. Bergey's Manual of Systematic Bacteriology , 2005 .
[42] A. Goffeau,et al. Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus , 2004, Nature Biotechnology.
[43] Robert C. Edgar,et al. MUSCLE: multiple sequence alignment with high accuracy and high throughput. , 2004, Nucleic acids research.
[44] Frédéric Leroy,et al. Lactic acid bacteria as functional starter cultures for the food fermentation industry , 2004 .
[45] G. Corrieu,et al. Influence of controlled pH and temperature on the growth and acidification of pure cultures of Streptococcus thermophilus 404 and Lactobacillus bulgaricus 398 , 1989, Applied Microbiology and Biotechnology.
[46] D. McMahon,et al. Biochemistry, genetics, and applications of exopolysaccharide production in Streptococcus thermophilus: a review. , 2003, Journal of dairy science.
[47] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[48] K. Kersters,et al. The Combined Use of Whole-cell Protein Extracts for the Identification (SDS-PAGE) and Enzyme Activity Screening of Lactic Acid Bacteria Isolated from Traditional Greek Dairy Products , 1994 .
[49] M. Nei,et al. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. , 1993, Molecular biology and evolution.
[50] E. Tsakalidou,et al. SDS-polyacrylamide gel electrophoresis of cell proteins from lactobacillus delbrueckii subsp. bulgaricus and streptococcus salivarius subsp. thermophilus strains isolated from yoghurt and cheese , 1992 .
[51] Horst Neve,et al. Revival of the species Streptococcus thermophilus (ex Orla-Jensen, 1919) nom. rev. , 1991 .
[52] O. Kandler,et al. Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[53] N. Saunders,et al. Rapid extraction of bacterial genomic DNA with guanidium thiocyanate , 1989 .
[54] P. Sneath,et al. Approved lists of bacterial names. , 1980, The Medical journal of Australia.
[55] R. Murray,et al. Proposals Concerning the Higher Taxa of Bacteria , 1978 .
[56] S. T. Cowan. Bergey's Manual of Determinative Bacteriology , 1948, Nature.
[57] S. Orla-Jensen. The lactic acid bacteria , 1919 .
[58] F. Rosenbach. Mikro-Organismen bei den Wund-Infeotiouskrankheiton des Menschen , 1884 .