Object category classification of fMRI data using support vector machine combined with deactivation voxel selection

Support Vector Machine (SVM) is an accurate pattern recognition method which has been widely used in functional MRI (fMRI) data classification. Voxel selection is a very important part in classification. In general, voxel selection is based on brain regions associated with activation caused by different experiment conditions or stimulations. However, negative blood oxygenation level-dependent responses (deactivation) which have also been found in humans or animals contribute to the classification of different cognitive tasks. Different from traditional studies which focused merely on the activation voxel selection methods, our aim is to investigate the deactivation voxel selection methods in the classification of fMRI data using SVM. In this study, three different voxel selection methods (deactivation, activation, the combination of deactivation and activation) are applied to decide which voxel is included in SVM classifier with linear kernel in classifying 4-category objects on fMRI data. The average accuracies of deactivation classification were 73.36%(house vs. face), 60.34%(house vs. car), 60.94%(house vs. cat), 71.43%(face vs. car), 63.17%(face vs. cat) and 61.61%(car vs. cat). The classification results of deactivation were significantly above the chance level which implies the deactivation is informative. The accuracies of combination of activation and deactivation method were close to that of activation method, and it was even better for some representative subjects. These results suggest deactivation provides useful information in the object category classification on fMRI data and the method of voxel selection based on both activation and deactivation will be a significant method in classification in the future.

[1]  Sean M. Polyn,et al.  Beyond mind-reading: multi-voxel pattern analysis of fMRI data , 2006, Trends in Cognitive Sciences.

[2]  Karl J. Friston,et al.  Statistical parametric maps in functional imaging: A general linear approach , 1994 .

[3]  Karl J. Friston,et al.  Functional Connectivity: Eigenimages and multivariate analyses , 2003 .

[4]  A. T. Smith,et al.  Attentional suppression of activity in the human visual cortex , 2000, Neuroreport.

[5]  S Makeig,et al.  Analysis of fMRI data by blind separation into independent spatial components , 1998, Human brain mapping.

[6]  Jean-Baptiste Poline,et al.  Multivariate Model Specification for fMRI Data , 2002, NeuroImage.

[7]  D. Tomasi,et al.  Common deactivation patterns during working memory and visual attention tasks: An intra‐subject fMRI study at 4 Tesla , 2006, Human brain mapping.

[8]  Giancarlo Valente,et al.  Multivariate analysis of fMRI time series: classification and regression of brain responses using machine learning. , 2008, Magnetic resonance imaging.

[9]  A. Shmuel,et al.  Sustained Negative BOLD, Blood Flow and Oxygen Consumption Response and Its Coupling to the Positive Response in the Human Brain , 2002, Neuron.

[10]  Gian Luca Romani,et al.  Negative BOLD during tongue movement: A functional magnetic resonance imaging study , 2009, Neuroscience Letters.

[11]  Janaina Mourão Miranda,et al.  Classifying brain states and determining the discriminating activation patterns: Support Vector Machine on functional MRI data , 2005, NeuroImage.

[12]  M Hutchinson,et al.  Task-specific deactivation patterns in functional magnetic resonance imaging. , 1999, Magnetic resonance imaging.

[13]  J. V. Haxby,et al.  Spatial Pattern Analysis of Functional Brain Images Using Partial Least Squares , 1996, NeuroImage.

[14]  Li Yao,et al.  Comparative Study of SVM Methods Combined with Voxel Selection for Object Category Classification on fMRI Data , 2011, PloS one.

[15]  Dae-Shik Kim,et al.  Origin of Negative Blood Oxygenation Level—Dependent fMRI Signals , 2002, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[16]  S. Strother,et al.  Reproducibility of BOLD‐based functional MRI obtained at 4 T , 1999, Human brain mapping.

[17]  N. Logothetis,et al.  Negative functional MRI response correlates with decreases in neuronal activity in monkey visual area V1 , 2006, Nature Neuroscience.

[18]  T. Carlson,et al.  Patterns of Activity in the Categorical Representations of Objects , 2003 .

[19]  Leslie G. Ungerleider,et al.  Distributed representation of objects in the human ventral visual pathway. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[20]  Tom M. Mitchell,et al.  Machine learning classifiers and fMRI: A tutorial overview , 2009, NeuroImage.