Content-based Image Retrieval of Environmental Microorganisms Using Double-stage Optimisation-based Fusion

Environmental Microorganisms (EMs) are very tiny living beings which impact the entire biosphere by their environmental functions. Traditionally, a lot of manual efforts through morphological analysis using microscopes have been put on looking for EMs. However, these methods are time-consuming and laborious. To this end, we develop a Contentbased Image Retrieval (CBIR) system for the EM image retrieval task within a Doublestage Optimisation-based Fusion framework. In the first stage, in order to effectively use the colour information of EM images, a Multiple Colour Channel Fusion (MCCR)method based on a Particle Swarm Optimisation (PSO) is developed to search for similar database images to a query image using local features. In the second stage, in order to enhance the retrieval performance of the first stage, a retrieval method based on Immune Evolutionary Particle Swarm Optimisation - Shuffled Frog Leaping Algorithm (IEPSO-SFLA) is devised to further combine global features. Finally, the experimental result shows that our doublestage fusion method obtains a mean average precision of 35:87% for 21 classes of EMs, which is superior to the existing method.

[1]  James Kennedy,et al.  Particle swarm optimization , 2002, Proceedings of ICNN'95 - International Conference on Neural Networks.

[2]  Meng Wang,et al.  Semisupervised Multiview Distance Metric Learning for Cartoon Synthesis , 2012, IEEE Transactions on Image Processing.

[3]  Andrew Zisserman,et al.  Scene Classification Using a Hybrid Generative/Discriminative Approach , 2008, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[4]  Yu Chun-xue Shuffled frog leaping algorithm based on immune evolutionary particle swarm optimization , 2011 .

[5]  Tao Jiang,et al.  Environmental Microbiological Content-Based Image Retrieval System Using Internal Structure Histogram , 2015, CORES.

[6]  Kevin E Lansey,et al.  Optimization of Water Distribution Network Design Using the Shuffled Frog Leaping Algorithm , 2003 .

[7]  Chen Li,et al.  Environmental Microorganism Classification Using Sparse Coding and Weakly Supervised Learning , 2015, EMR@ICMR.

[8]  Koen E. A. van de Sande,et al.  Evaluating Color Descriptors for Object and Scene Recognition , 2010, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[9]  Christof Koch,et al.  Toward color image segmentation in analog VLSI: Algorithm and hardware , 1994, International Journal of Computer Vision.

[10]  Chen Li,et al.  Environmental microbiology aided by content-based image analysis , 2015, Pattern Analysis and Applications.

[11]  Donald E. Grierson,et al.  Comparison among five evolutionary-based optimization algorithms , 2005, Adv. Eng. Informatics.

[12]  Chen Li,et al.  A survey for the applications of content-based microscopic image analysis in microorganism classification domains , 2019, Artificial Intelligence Review.

[13]  Tao Jiang,et al.  Environmental microorganism image retrieval using multiple colour channels fusion and particle swarm optimisation , 2016, 2016 IEEE International Conference on Image Processing (ICIP).

[14]  Chen Li,et al.  Application of content-based image analysis to environmental microorganism classification , 2015 .

[15]  Yuhui Shi,et al.  Particle swarm optimization: developments, applications and resources , 2001, Proceedings of the 2001 Congress on Evolutionary Computation (IEEE Cat. No.01TH8546).

[16]  Jing Li Wang,et al.  Color image segmentation: advances and prospects , 2001, Pattern Recognit..

[17]  Cordelia Schmid,et al.  Scale & Affine Invariant Interest Point Detectors , 2004, International Journal of Computer Vision.

[18]  Roy Sterritt,et al.  Swarms and Swarm Intelligence , 2007, Computer.

[19]  Matthijs C. Dorst Distinctive Image Features from Scale-Invariant Keypoints , 2011 .

[20]  Jian Sun,et al.  Deep Residual Learning for Image Recognition , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[21]  Robert C. Bolles,et al.  Random sample consensus: a paradigm for model fitting with applications to image analysis and automated cartography , 1981, CACM.