Structural classification of proteins and structural genomics: new insights into protein folding and evolution

This review article surveys the protein structures determined by Joint Center for Structural Genomics and published in this special issue of Acta Crystallographica Section F.

[1]  R. Rosenfeld.  Nature , 2009, Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery.

[2]  A V Finkelstein,et al.  The classification and origins of protein folding patterns. , 1990, Annual review of biochemistry.

[3]  A. Murzin,et al.  Evolution of protein fold in the presence of functional constraints. , 2006, Current Opinion in Structural Biology.

[4]  N. Grishin.  Treble clef finger--a functionally diverse zinc-binding structural motif. , 2001, Nucleic acids research.

[5]  Alexey G. Murzin,et al.  Metamorphic Proteins , 2008, Science.

[6]  M J Sternberg,et al.  On the conformation of proteins: the handedness of the connection between parallel beta-strands. , 1977, Journal of molecular biology.

[7]  C. Chothia,et al.  Structural patterns in globular proteins , 1976, Nature.

[8]  N. Grishin.  Fold change in evolution of protein structures. , 2001, Journal of structural biology.

[9]  F. Young.  Biochemistry , 1955, The Indian Medical Gazette.

[10]  D. Klessig,et al.  The Structure of YqeH , 2008, Journal of Biological Chemistry.

[11]  M. Sternberg,et al.  On the conformation of proteins: The handedness of the β-strand-α-helix-β-strand unit , 1976 .

[12]  Karen N. Allen,et al.  The origin of the electrostatic perturbation in acetoacetate decarboxylase , 2009, Nature.

[13]  A. Lesk,et al.  Principles determining the structure of beta-sheet barrels in proteins. II. The observed structures. , 1994, Journal of molecular biology.

[14]  J. Richardson,et al.  β-Sheet topology and the relatedness of proteins , 1977, Nature.

[15]  Richard Bonneau,et al.  Contact order and ab initio protein structure prediction , 2002, Protein science : a publication of the Protein Society.

[16]  A G Murzin,et al.  SCOP: a structural classification of proteins database for the investigation of sequences and structures. , 1995, Journal of molecular biology.

[17]  R. Sauer,et al.  Equilibrium stability and sub-millisecond refolding of a designed single-chain Arc repressor. , 1996, Biochemistry.

[18]  C. Chothia,et al.  Protein folds in the all-beta and all-alpha classes. , 1997, Annual review of biophysics and biomolecular structure.

[19]  J. Richardson,et al.  The anatomy and taxonomy of protein structure. , 1981, Advances in protein chemistry.

[20]  C. Chothia.  Principles that determine the structure of proteins. , 1984, Annual review of biochemistry.

[21]  Satoshi Hirano,et al.  Crystal Structure of VioE, a Key Player in the Construction of the Molecular Skeleton of Violacein* , 2008, Journal of Biological Chemistry.

[22]  Kap Lim,et al.  Structure of the YibK methyltransferase from Haemophilus influenzae (HI0766): A cofactor bound at a site formed by a knot , 2003, Proteins.

[23]  Slawomir K. Grzechnik,et al.  Crystal structure of the global regulatory protein CsrA from Pseudomonas putida at 2.05 Å resolution reveals a new fold , 2005, Proteins.