Classification of collective behavior: a comparison of tracking and machine learning methods to study the effect of ambient light on fish shoaling
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Sachit Butail | Maurizio Porfiri | Philip Salerno | Erik M Bollt | M. Porfiri | E. Bollt | S. Butail | Philip Salerno
[1] Andreas Zell,et al. Automated classification of the behavior of rats in the forced swimming test with support vector machines , 2008, Neural Networks.
[2] Michael H. Dickinson,et al. TrackFly: Virtual reality for a behavioral system analysis in free-flying fruit flies , 2008, Journal of Neuroscience Methods.
[3] Eric O. Postma,et al. Dimensionality Reduction: A Comparative Review , 2008 .
[4] Fabrizio Smeraldi,et al. Development and automation of a test of impulse control in zebrafish , 2013, Front. Syst. Neurosci..
[5] Wen Gao,et al. Image Matching by Normalized Cross-Correlation , 2006, 2006 IEEE International Conference on Acoustics Speech and Signal Processing Proceedings.
[6] Robert Pless,et al. Image spaces and video trajectories: using Isomap to explore video sequences , 2003, Proceedings Ninth IEEE International Conference on Computer Vision.
[7] Y. Bar-Shalom. Tracking and data association , 1988 .
[8] Jürgen Weese,et al. A comparison of similarity measures for use in 2-D-3-D medical image registration , 1998, IEEE Transactions on Medical Imaging.
[9] Sachit Butail,et al. Sociality modulates the effects of ethanol in zebra fish. , 2014, Alcoholism, clinical and experimental research.
[10] Naomi Ehrich Leonard,et al. Real-Time Feedback-Controlled Robotic Fish for Behavioral Experiments With Fish Schools , 2012, Proceedings of the IEEE.
[11] Roberto Brunelli,et al. Face Recognition: Features Versus Templates , 1993, IEEE Trans. Pattern Anal. Mach. Intell..
[12] Pascal Poncin,et al. Video multitracking of fish behaviour: a synthesis and future perspectives , 2013 .
[13] Andrew W. Fitzgibbon,et al. Real-time human pose recognition in parts from single depth images , 2011, CVPR 2011.
[14] Sorin Draghici,et al. Machine Learning and Its Applications to Biology , 2007, PLoS Comput. Biol..
[15] J. P. Lewis. Fast Normalized Cross-Correlation , 2010 .
[16] Kesheng Wu,et al. Fast connected-component labeling , 2009, Pattern Recognit..
[17] Noam Miller,et al. From Schooling to Shoaling: Patterns of Collective Motion in Zebrafish (Danio rerio) , 2012, PloS one.
[18] Sachit Butail,et al. Collective Response of Zebrafish Shoals to a Free-Swimming Robotic Fish , 2013, PloS one.
[19] Maurizio Porfiri,et al. Topological analysis of group fragmentation in multiagent systems. , 2013, Physical review. E, Statistical, nonlinear, and soft matter physics.
[20] Andrew T. Hartnett,et al. Both information and social cohesion determine collective decisions in animal groups , 2013, Proceedings of the National Academy of Sciences.
[21] Marco Dadda,et al. Behavioural asymmetry affects escape performance in a teleost fish , 2010, Biology Letters.
[22] Tobias Bjerregaard,et al. A survey of research and practices of Network-on-chip , 2006, CSUR.
[23] Nasser M. Nasrabadi,et al. Pattern Recognition and Machine Learning , 2006, Technometrics.
[24] Ingemar J. Cox,et al. A review of statistical data association techniques for motion correspondence , 1993, International Journal of Computer Vision.
[25] Giovanni Polverino,et al. Closed-loop control of zebrafish response using a bioinspired robotic-fish in a preference test , 2013, Journal of The Royal Society Interface.
[26] O. Feinerman,et al. Automated long-term tracking and social behavioural phenotyping of animal colonies within a semi-natural environment , 2013, Nature Communications.
[27] Giovanni Polverino,et al. Collective behaviour across animal species , 2014, Scientific Reports.
[28] Vicsek,et al. Novel type of phase transition in a system of self-driven particles. , 1995, Physical review letters.
[29] Corey J. Bohil,et al. Virtual reality in neuroscience research and therapy , 2011, Nature Reviews Neuroscience.
[30] Pascal Poncin,et al. A video multitracking system for quantification of individual behavior in a large fish shoal: Advantages and limits , 2009, Behavior research methods.
[31] Tsutomu Takagi,et al. Schooling behaviour and retinomotor response of juvenile Pacific bluefin tuna Thunnus orientalis under different light intensities , 2007 .
[32] ShaoLing,et al. Recent advances and trends in visual tracking , 2011 .
[33] J. Munkres. ALGORITHMS FOR THE ASSIGNMENT AND TRANSIORTATION tROBLEMS* , 1957 .
[34] Ling Shao,et al. Recent advances and trends in visual tracking: A review , 2011, Neurocomputing.
[35] Effects of Light on Schooling and Feeding of Jack Mackerel, Trachurus symmetricus , 1968 .
[36] Paul J. B. Hart,et al. Habitat-specific chemical cues influence association preferences and shoal cohesion in fish , 2007, Behavioral Ecology and Sociobiology.
[37] Ahmed M. Elgammal,et al. Nonlinear manifold learning for dynamic shape and dynamic appearance , 2007, Comput. Vis. Image Underst..
[38] S. Diehl. Foraging efficiency of three freshwater fishes: effects of structural complexity and light , 1988 .
[39] F Mondada,et al. Social Integration of Robots into Groups of Cockroaches to Control Self-Organized Choices , 2007, Science.
[40] E. Alleva,et al. Long-term effects of the periadolescent environment on exploratory activity and aggressive behaviour in mice: social versus physical enrichment , 2004, Physiology & Behavior.
[41] Michael Kirby,et al. Geometric Data Analysis: An Empirical Approach to Dimensionality Reduction and the Study of Patterns , 2000 .
[42] Francisco A. Zabala,et al. A Simple Strategy for Detecting Moving Objects during Locomotion Revealed by Animal-Robot Interactions , 2012, Current Biology.
[43] J. Deneubourg,et al. Interactive robots in experimental biology. , 2011, Trends in ecology & evolution.
[44] Maurizio Porfiri,et al. Topological analysis of complexity in multiagent systems. , 2012, Physical review. E, Statistical, nonlinear, and soft matter physics.
[45] Ronald Poppe,et al. A survey on vision-based human action recognition , 2010, Image Vis. Comput..
[46] L. Fuiman,et al. Light intensity and schooling behaviour in larval gulf menhaden , 1996 .
[47] P. Cosman,et al. Using machine vision to analyze and classify Caenorhabditis elegans behavioral phenotypes quantitatively , 2002, Journal of Neuroscience Methods.
[48] J. Krause,et al. Social organisation, shoal structure and information transfer , 2003 .
[49] Sachit Butail,et al. Putting the fish in the fish tank: Immersive VR for animal behavior experiments , 2012, 2012 IEEE International Conference on Robotics and Automation.
[50] Robert Gerlai,et al. Oscillations in shoal cohesion in zebrafish (Danio rerio) , 2008, Behavioural Brain Research.
[51] Martin D. Buhmann,et al. Radial Basis Functions , 2021, Encyclopedia of Mathematical Geosciences.
[52] Vicenç Quera,et al. Determining shoal membership using affinity propagation , 2013, Behavioural Brain Research.
[53] S. Levin,et al. Dynamics of fish shoals: identifying key decision rules , 2004 .
[54] Kristin Branson,et al. JAABA: interactive machine learning for automatic annotation of animal behavior , 2013, Nature Methods.
[55] J. Tenenbaum,et al. A global geometric framework for nonlinear dimensionality reduction. , 2000, Science.
[56] Miguel A. Carreira-Perpinan,et al. Dimensionality Reduction , 2011 .
[57] Esteban Fernández-Juricic,et al. Where does a flock end from an information perspective? A comparative experiment with live and robotic birds , 2011 .
[58] Sachit Butail,et al. Analysis and classification of collective behavior using generative modeling and nonlinear manifold learning. , 2013, Journal of theoretical biology.
[59] Cristina Saverino,et al. The social zebrafish: Behavioral responses to conspecific, heterospecific, and computer animated fish , 2008, Behavioural Brain Research.
[60] David G. Lowe,et al. Distinctive Image Features from Scale-Invariant Keypoints , 2004, International Journal of Computer Vision.
[61] Julia K. Parrish,et al. Animal Groups in Three Dimensions: Analysis , 1997 .
[62] Robert Pless,et al. Image distance functions for manifold learning , 2007, Image Vis. Comput..
[63] Stephan C F Neuhauss,et al. Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond. , 2013, Zebrafish.
[64] L P Noldus,et al. EthoVision: A versatile video tracking system for automation of behavioral experiments , 2001, Behavior research methods, instruments, & computers : a journal of the Psychonomic Society, Inc.
[65] James W. Davis,et al. The Recognition of Human Movement Using Temporal Templates , 2001, IEEE Trans. Pattern Anal. Mach. Intell..
[66] R. Whitney. Schooling of Fishes Relative to Available Light , 1969 .