Streptosporangium minutum sp. nov., isolated from garden soil exposed to microwave radiation

[1]  H. Kasai,et al.  Frondibacter mangrovi sp. nov., a member of the family Flavobacteriaceae isolated from seawater by in situ cultivation, and emended description of Frondibacter aureus. , 2017, International journal of systematic and evolutionary microbiology.

[2]  P. Meyers.  Molecular-signature analyses support the establishment of the actinobacterial genus Sphaerimonospora (Mingma et al. 2016). , 2017, Systematic and applied microbiology.

[3]  Paul Stothard,et al.  Visualizing and comparing circular genomes using the CGView family of tools , 2017, Briefings Bioinform..

[4]  J. Chun,et al.  Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies , 2017, International journal of systematic and evolutionary microbiology.

[5]  Renzo Kottmann,et al.  The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters , 2016, Nucleic Acids Res..

[6]  H. Klenk,et al.  Streptosporangium becharense sp. nov., an actinobacterium isolated from desert soil. , 2016, International journal of systematic and evolutionary microbiology.

[7]  Xiangjing Wang,et al.  Streptosporangium jiaoheense sp. nov. and Streptosporangium taraxaci sp. nov., actinobacteria isolated from soil and dandelion root (Taraxacum mongolicum Hand.-Mazz.). , 2016, International journal of systematic and evolutionary microbiology.

[8]  H. Klenk,et al.  Streptosporangium algeriense sp. nov., an actinobacterium isolated from desert soil. , 2016, International journal of systematic and evolutionary microbiology.

[9]  Xiangjing Wang,et al.  Streptosporangium lutulentum sp. nov., Streptosporangium fenghuangense sp. nov. and Streptosporangium corydalis sp. nov., three novel actinobacterial species isolated from National Forest Park of Fenghuang Mountain , 2016, Antonie van Leeuwenhoek.

[10]  Ying Huang,et al.  Discovery of pentangular polyphenols hexaricins A–C from marine Streptosporangium sp. CGMCC 4.7309 by genome mining , 2016, Applied Microbiology and Biotechnology.

[11]  P. Meyers.  Analysis of recombinase A (recA/RecA) in the actinobacterial family Streptosporangiaceae and identification of molecular signatures. , 2015, Systematic and applied microbiology.

[12]  P. Meyers.  Gyrase subunit B amino acid signatures for the actinobacterial family Streptosporangiaceae. , 2014, Systematic and applied microbiology.

[13]  Aaron E. Darling,et al.  A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data , 2014, Bioinform..

[14]  Koichiro Tamura,et al.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. , 2013, Molecular biology and evolution.

[15]  Alexey A. Gurevich,et al.  QUAST: quality assessment tool for genome assemblies , 2013, Bioinform..

[16]  Alexander F. Auch,et al.  Genome sequence-based species delimitation with confidence intervals and improved distance functions , 2013, BMC Bioinformatics.

[17]  Adriano S. Arantes,et al.  Comparing thousands of circular genomes using the CGView Comparison Tool , 2012, BMC Genomics.

[18]  S. Ōmura,et al.  Streptosporangium oxazolinicum sp. nov., a novel endophytic actinomycete producing new antitrypanosomal antibiotics, spoxazomicins , 2011, The Journal of Antibiotics.

[19]  Joel Dudley,et al.  MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences , 2008, Briefings Bioinform..

[20]  S. Horinouchi,et al.  Phenolic Lipids Synthesized by Type III Polyketide Synthase Confer Penicillin Resistance on Streptomyces griseus* , 2008, Journal of Biological Chemistry.

[21]  Jun Ishikawa,et al.  Genome Sequence of the Streptomycin-Producing Microorganism Streptomyces griseus IFO 13350 , 2008, Journal of bacteriology.

[22]  S. Horinouchi,et al.  Conditionally positive effect of the TetR-family transcriptional regulator AtrA on streptomycin production by Streptomyces griseus. , 2008, Microbiology.

[23]  Robert C. Edgar,et al.  MUSCLE: multiple sequence alignment with high accuracy and high throughput. , 2004, Nucleic acids research.

[24]  P. Meyers,et al.  Rapid identification of filamentous actinomycetes to the genus level using genus-specific 16S rRNA gene restriction fragment patterns. , 2003, International journal of systematic and evolutionary microbiology.

[25]  J. Swings,et al.  Re-examination of the genus Acetobacter, with descriptions of Acetobacter cerevisiae sp. nov. and Acetobacter malorum sp. nov. , 2002, International journal of systematic and evolutionary microbiology.

[26]  B. Barrell,et al.  Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2) , 2002, Nature.

[27]  D. Gevers,et al.  Applicability of rep-PCR fingerprinting for identification of Lactobacillus species. , 2001, FEMS microbiology letters.

[28]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[29]  M. Nei,et al.  Efficiencies of fast algorithms of phylogenetic inference under the criteria of maximum parsimony, minimum evolution, and maximum likelihood when a large number of sequences are used. , 2000, Molecular biology and evolution.

[30]  U. Theobald,et al.  Improved secondary metabolite production in the genus Streptosporangium by optimization of the fermentation conditions. , 2000, Journal of biotechnology.

[31]  P. Vos,et al.  Evaluation of a microplate DNA : DNA hybridization method compared with the initial renaturation method , 1998 .

[32]  J. Schottel,et al.  Isolation and characterization of an antibiotic produced by the scab disease-suppressive Streptomyces diastatochromogenes strain PonSSII , 1997, Journal of Industrial Microbiology and Biotechnology.

[33]  H. Kinashi,et al.  A set of ordered cosmids and a detailed genetic and physical map for the 8 Mb Streptomyces coelicolor A3(2) chromosome , 1996, Molecular microbiology.

[34]  Ronald M. Atlas,et al.  Handbook of microbiological media , 1993 .

[35]  R. C. Yao,et al.  Streptosporangium carneum sp. nov. isolated from soil , 1990 .

[36]  Takayuki Ezaki,et al.  Fluorometric Deoxyribonucleic Acid-Deoxyribonucleic Acid Hybridization in Microdilution Wells as an Alternative to Membrane Filter Hybridization in which Radioisotopes Are Used To Determine Genetic Relatedness among Bacterial Strains , 1989 .

[37]  in chief George M. Garrity.  Bergey’s Manual® of Systematic Bacteriology , 1989, Springer New York.

[38]  O. Kandler,et al.  International Committee on Systematic Bacteriology: announcement of the report of the ad hoc Committee on Reconciliation of Approaches to Bacterial Systematics. , 1987, Zentralblatt fur Bakteriologie, Mikrobiologie, und Hygiene. Series A, Medical microbiology, infectious diseases, virology, parasitology.

[39]  N. Saitou,et al.  The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.

[40]  J. Felsenstein.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP , 1985, Evolution; international journal of organic evolution.

[41]  M. Kimura.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences , 1980, Journal of Molecular Evolution.

[42]  V. Betina.  Bioautography in paper and thin-layer chromatography and its scope in the antibiotic field. , 1973, Journal of chromatography.

[43]  H. Lechevalier,et al.  Chemical composition as a criterion in the classification of aerobic actinomycetes , 1970 .

[44]  E. B. Shirling,et al.  Methods for characterization of Streptomyces species , 1966 .

[45]  Xiangjing Wang,et al.  Streptosporangium shengliensis sp. nov., a novel actinomycete isolated from a lake sediment , 2013, Antonie van Leeuwenhoek.

[46]  T. Hansen.  Bergey's Manual of Systematic Bacteriology , 2005 .

[47]  J. Felsenstein.  Evolutionary trees from DNA sequences: A maximum likelihood approach , 2005, Journal of Molecular Evolution.

[48]  G. Platas,et al.  Nutritional preferences of a group of Streptosporangium soil isolates. , 1999, Journal of bioscience and bioengineering.

[49]  T. Hasegawa,et al.  A rapid analysis for chemical grouping of aerobic actinomycetes. , 1983 .

[50]  R. Gordon,et al.  Nocardia coeliaca, Nocardia autotrophica, and the Nocardin Strain , 1974 .

[51]  J. Marmur.  [100] A procedure for the isolation of deoxyribonucleic acid from microorganisms , 1963 .

[52]  J. Couch.  A new genus and family of the Actinomycetales, with a revision of the genus Actinoplanes , 1955 .

[53]  Gapped BLAST and PSI-BLAST: A new , 1997 .