Volumetric Surface-guided Graph-based Segmentation of Cardiac Adipose Tissues on Fat-Water MR Images

Different endocrine roles of cardiac adipose tissues motivate the analysis of their volumes and compositions on large cohort image data sets. This, however, demands reliable robust methods for automated segmentations as manual segmentations are tedious costly and unreproducible. Besides the effects of noise and partial volumes, segmentation of these adipose tissues on clinical medical images is challenged by their similar intensities and features and undetectability of their boundaries. In this paper, we present a feature- and prior-based random walker graph that additionally incorporates a diffusion-based susceptible infected recovered model to guide the segmentation by the curvatures of the surface of the segmented cardiac structures. This method is trained and evaluated for segmenting epicardial, pericardial, and perivascular adipose tissues on volumetric fat-water magnetic resonance images. The obtained results demonstrate its utility for large cohort investigation of these adipose compartments and also any other segmentation task on multichannel images.

[1]  Bin Yang,et al.  Automatic atlas-guided constrained random Walker algorithm for 3D segmentation of muscles on water magnetic resonance images , 2017, 2017 25th European Signal Processing Conference (EUSIPCO).

[2]  Bin Yang,et al.  A Hierarchical Ensemble Classifier for Multilabel Segmentation of Fat-Water MR Images , 2018, 2018 26th European Signal Processing Conference (EUSIPCO).

[3]  Scott B Reeder,et al.  Water–fat separation with bipolar multiecho sequences , 2008, Magnetic resonance in medicine.

[4]  Diego Hernando,et al.  Robust water/fat separation in the presence of large field inhomogeneities using a graph cut algorithm , 2009, Magnetic resonance in medicine.

[5]  Hong Zhao,et al.  Texture Feature Analysis for Computer-Aided Diagnosis on Pulmonary Nodules , 2015, Journal of Digital Imaging.

[6]  Leo Grady,et al.  Multilabel random walker image segmentation using prior models , 2005, 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'05).

[7]  Eugene B Postnikov,et al.  Continuum description of a contact infection spread in a SIR model. , 2007, Mathematical biosciences.

[8]  Fabian Bamberg,et al.  Simultaneous Volumetric Segmentation of Vertebral Bodies and Intervertebral Discs on Fat-Water MR Images , 2019, IEEE Journal of Biomedical and Health Informatics.

[9]  Bin Yang,et al.  Hierarchical Feature-learning Graph-based Segmentation of Fat-Water MR Images , 2018, 2018 Signal Processing: Algorithms, Architectures, Arrangements, and Applications (SPA).

[10]  Patricia Iozzo,et al.  Myocardial, Perivascular, and Epicardial Fat , 2011, Diabetes Care.

[11]  Petros Maragos,et al.  Graph-Driven Diffusion and Random Walk Schemes for Image Segmentation , 2017, IEEE Transactions on Image Processing.

[12]  Faezeh Fallah,et al.  Comparison of T1-weighted 2D TSE, 3D SPGR, and two-point 3D Dixon MRI for automated segmentation of visceral adipose tissue at 3 Tesla. , 2017 .

[13]  Marco Nolden,et al.  The Medical Imaging Interaction Toolkit , 2005, Medical Image Anal..

[14]  Fabian Bamberg,et al.  A novel objective function based on a generalized kelly criterion for deep learning , 2017, 2017 Signal Processing: Algorithms, Architectures, Arrangements, and Applications (SPA).

[15]  William T. Freeman,et al.  Orientation Histograms for Hand Gesture Recognition , 1995 .