Impact of Escherichia coli K12 and O18:K1 on human platelets: Differential effects on platelet activation, RNAs and proteins

[1]  S. Mirarab,et al.  Sequence Analysis , 2020, Encyclopedia of Bioinformatics and Computational Biology.

[2]  T. van der Poll,et al.  Nbeal2 Deficiency Increases Organ Damage but Does Not Affect Host Defense During Gram-Negative Pneumonia-Derived Sepsis , 2018, Arteriosclerosis, thrombosis, and vascular biology.

[3]  G. Cimmino,et al.  Splicing of platelet resident pre-mRNAs upon activation by physiological stimuli results in functionally relevant proteome modifications , 2018, Scientific Reports.

[4]  T. Gudermann,et al.  Migrating Platelets Are Mechano-scavengers that Collect and Bundle Bacteria , 2017, Cell.

[5]  C. Sáez,et al.  Human platelet interaction with E. coli O111 promotes tissue-factor-dependent procoagulant activity, involving Toll like receptor 4 , 2017, PloS one.

[6]  E. Giovannetti,et al.  Swarm Intelligence-Enhanced Detection of Non-Small-Cell Lung Cancer Using Tumor-Educated Platelets , 2017, Cancer cell.

[7]  Hongbing Shen,et al.  Obesity, metabolic factors and risk of different histological types of lung cancer: A Mendelian randomization study , 2017, PloS one.

[8]  M. Aronova,et al.  Golgi proteins in circulating human platelets are distributed across non-stacked, scattered structures , 2017, Platelets.

[9]  Nicholas T. Ingolia,et al.  Slowed decay of mRNAs enhances platelet specific translation. , 2017, Blood.

[10]  P. Kubes,et al.  Platelets and infection. , 2016, Seminars in immunology.

[11]  Yuanyuan Ruan,et al.  E3 ubiquitin ligase CHIP interacts with C-type lectin-like receptor CLEC-2 and promotes its ubiquitin-proteasome degradation. , 2016, Cellular signalling.

[12]  C. Mannhalter,et al.  Platelet‐borne complement proteins and their role in platelet–bacteria interactions , 2016, Journal of thrombosis and haemostasis : JTH.

[13]  Andrew D. Johnson,et al.  Characterization of the platelet transcriptome by RNA sequencing in patients with acute myocardial infarction , 2016, Platelets.

[14]  I. Henderson,et al.  Human platelet activation by Escherichia coli: roles for FcγRIIA and integrin αIIbβ3 , 2016, Platelets.

[15]  Jannetta S. Steyn,et al.  Circular RNA enrichment in platelets is a signature of transcriptome degradation. , 2016, Blood.

[16]  D. Cox,et al.  Escherichia coli induces platelet aggregation in an FcγRIIa‐dependent manner , 2016, Journal of thrombosis and haemostasis : JTH.

[17]  Pieter Wesseling,et al.  RNA-Seq of Tumor-Educated Platelets Enables Blood-Based Pan-Cancer, Multiclass, and Molecular Pathway Cancer Diagnostics , 2015, Cancer cell.

[18]  B. Giepmans,et al.  Horizontal RNA transfer mediates platelet-induced hepatocyte proliferation. , 2015, Blood.

[19]  O. Shannon Platelet interaction with bacterial toxins and secreted products , 2015, Platelets.

[20]  J. Fox,et al.  Helicobacter pylori Eradication in Patients with Immune Thrombocytopenic Purpura: A Review and the Role of Biogeography , 2015, Helicobacter.

[21]  T. van der Poll,et al.  Thrombocytopenia impairs host defense in gram-negative pneumonia-derived sepsis in mice. , 2014, Blood.

[22]  H. Lähdesmäki,et al.  Expression profiles of long non-coding RNAs located in autoimmune disease-associated regions reveal immune cell-type specificity , 2014, Genome Medicine.

[23]  M. Chatterjee,et al.  SDF‐1α induces differential trafficking of CXCR4‐CXCR7 involving cyclophilin A, CXCR7 ubiquitination and promotes platelet survival , 2014, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[24]  S. Watson,et al.  Amplification of bacteria-induced platelet activation is triggered by FcγRIIA, integrin αIIbβ3, and platelet factor 4. , 2014, Blood.

[25]  O. Garraud,et al.  Streptococcus sanguinis-induced cytokine and matrix metalloproteinase-1 release from platelets , 2014, BMC Immunology.

[26]  Björn Usadel,et al.  Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..

[27]  M. Kuwana Helicobacter pylori-associated immune thrombocytopenia: clinical features and pathogenic mechanisms. , 2014, World journal of gastroenterology.

[28]  K. Kain,et al.  Mesenchymal stromal (stem) cells suppress pro-inflammatory cytokine production but fail to improve survival in experimental staphylococcal toxic shock syndrome , 2014, BMC Immunology.

[29]  T. Gingeras,et al.  Comment on “TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions” by Kim et al. , 2013, bioRxiv.

[30]  T. Hirayama,et al.  VacA, the vacuolating cytotoxin of Helicobacter pylori, binds to multimerin 1 on human platelets , 2013, Thrombosis Journal.

[31]  S. Eaton,et al.  Electron spin-lattice relaxation mechanisms of rapidly-tumbling nitroxide radicals. , 2013, Journal of magnetic resonance.

[32]  W. Lu,et al.  Morphology of platelet Golgi apparatus and their significance after acute cerebral infarction , 2013, Neural regeneration research.

[33]  Cole Trapnell,et al.  TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions , 2013, Genome Biology.

[34]  B. Lindner,et al.  Intact rough‐ and smooth‐form lipopolysaccharides from Escherichia coli separated by preparative gel electrophoresis exhibit differential biologic activity in human macrophages , 2013, The FEBS journal.

[35]  I. Rigoutsos,et al.  The complex transcriptional landscape of the anucleate human platelet , 2013, BMC Genomics.

[36]  David G Hendrickson,et al.  Differential analysis of gene regulation at transcript resolution with RNA-seq , 2012, Nature Biotechnology.

[37]  B. Pozzetto,et al.  Human platelets can discriminate between various bacterial LPS isoforms via TLR4 signaling and differential cytokine secretion. , 2012, Clinical immunology.

[38]  F. Granucci,et al.  Similarities and differences of innate immune responses elicited by smooth and rough LPS. , 2012, Immunology letters.

[39]  C. Flowers,et al.  A Systematic Review and Meta-Analysis of Radioimmunotherapy Consolidation for Untreated Patients with Follicular Lymphoma (FL) , 2011 .

[40]  Andrew J. Oler,et al.  Genome-wide RNA-seq analysis of human and mouse platelet transcriptomes. , 2011, Blood.

[41]  T. Wurdinger,et al.  Blood platelets contain tumor-derived RNA biomarkers. , 2011, Blood.

[42]  L. Leibovici,et al.  Thrombocytopenia in Staphylococcus aureus bacteremia: risk factors and prognostic importance. , 2011, Mayo Clinic proceedings.

[43]  Robert A. Campbell,et al.  The septic milieu triggers expression of spliced tissue factor mRNA in human platelets , 2011, Journal of thrombosis and haemostasis : JTH.

[44]  Deng-Chyang Wu,et al.  P-selectin-dependent platelet aggregation and apoptosis may explain the decrease in platelet count during Helicobacter pylori infection. , 2010, Blood.

[45]  D. Cox,et al.  Platelet–bacterial interactions , 2010, Cellular and Molecular Life Sciences.

[46]  C. Nguyên,et al.  Role of Survivin in Drug Resistant B-Cell Acute Lymphoblastic Leukemia. , 2009 .

[47]  Davis J. McCarthy,et al.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..

[48]  D. Karpman,et al.  Shiga Toxin and Lipopolysaccharide Induce Platelet-Leukocyte Aggregates and Tissue Factor Release, a Thrombotic Mechanism in Hemolytic Uremic Syndrome , 2009, PloS one.

[49]  G. Rousseau,et al.  Existence of a microRNA pathway in anucleate platelets , 2009, Nature Structural &Molecular Biology.

[50]  D. Wolters,et al.  Platelet membrane proteomics: a novel repository for functional research. , 2009, Blood.

[51]  T. Yip,et al.  Platelets actively sequester angiogenesis regulators. , 2009, Blood.

[52]  E. Spelke,et al.  Spontaneous mapping of number and space in adults and young children , 2009, Cognition.

[53]  P. Shashkin,et al.  Lipopolysaccharide Is a Direct Agonist for Platelet RNA Splicing1 , 2008, The Journal of Immunology.

[54]  Stephen R. Clark,et al.  Platelet TLR4 activates neutrophil extracellular traps to ensnare bacteria in septic blood , 2007, Nature Medicine.

[55]  N. Mackman,et al.  Signal-dependent splicing of tissue factor pre-mRNA modulates the thrombogenecity of human platelets , 2006, The Journal of experimental medicine.

[56]  C. Svanborg,et al.  Lipopolysaccharide from enterohemorrhagic Escherichia coli binds to platelets through TLR4 and CD62 and is detected on circulating platelets in patients with hemolytic uremic syndrome. , 2006, Blood.

[57]  W. Jy,et al.  Platelet Activation in Helicobacter pylori-Associated Idiopathic Thrombocytopenic Purpura: Eradication Reduces Platelet Activation but Seldom Improves Platelet Counts , 2006, Acta Haematologica.

[58]  Zhengfan Jiang,et al.  R‐form LPS, the master key to the activation ofTLR4/MD‐2‐positive cells , 2006, European journal of immunology.

[59]  S. Dower,et al.  Agonists of toll-like receptor (TLR)2 and TLR4 are unable to modulate platelet activation by adenosine diphosphate and platelet activating factor , 2005, Thrombosis and Haemostasis.

[60]  K. Swoboda,et al.  Escaping the Nuclear Confines: Signal-Dependent Pre-mRNA Splicing in Anucleate Platelets , 2005, Cell.

[61]  Zhengfan Jiang,et al.  CD14 is required for MyD88-independent LPS signaling , 2005, Nature Immunology.

[62]  S. Kunapuli,et al.  Rapid ubiquitination of Syk following GPVI activation in platelets. , 2005, Blood.

[63]  D. Cox,et al.  A serine‐rich glycoprotein of Streptococcus sanguis mediates adhesion to platelets via GPIb , 2005, British journal of haematology.

[64]  K. Hauser,et al.  Deficiency of ATP2C1, a Golgi Ion Pump, Induces Secretory Pathway Defects in Endoplasmic Reticulum (ER)-associated Degradation and Sensitivity to ER Stress* , 2005, Journal of Biological Chemistry.

[65]  G. Cagney,et al.  Characterization of the proteins released from activated platelets leads to localization of novel platelet proteins in human atherosclerotic lesions. , 2004, Blood.

[66]  Harry L. T. Mobley,et al.  Pathogenic Escherichia coli , 2004, Nature Reviews Microbiology.

[67]  A. Rao,et al.  Association of CBFA2 mutation with decreased platelet PKC-theta and impaired receptor-mediated activation of GPIIb-IIIa and pleckstrin phosphorylation: proteins regulated by CBFA2 play a role in GPIIb-IIIa activation. , 2004, Blood.

[68]  Dermot F. Reilly,et al.  Integration of Proteomics and Genomics in Platelets , 2004, Molecular & Cellular Proteomics.

[69]  Brad T. Sherman,et al.  DAVID: Database for Annotation, Visualization, and Integrated Discovery , 2003, Genome Biology.

[70]  T. Fujita,et al.  LPS-induced platelet response and rapid shock in mice: contribution of O-antigen region of LPS and involvement of the lectin pathway of the complement system. , 2002, Blood.

[71]  M. Byrne,et al.  A role for glycoprotein Ib in Streptococcus sanguis-induced platelet aggregation. , 2002, Blood.

[72]  T. Yokochi,et al.  Complement-Dependent Accumulation and Degradation of Platelets in the Lung and Liver Induced by Injection of Lipopolysaccharides , 1999, Infection and Immunity.

[73]  D. Dixon,et al.  Signal-dependent translation of a regulatory protein, Bcl-3, in activated human platelets. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[74]  A. Cheung,et al.  Staphylococcus aureus induces platelet aggregation via a fibrinogen-dependent mechanism which is independent of principal platelet glycoprotein IIb/IIIa fibrinogen-binding domains , 1995, Infection and immunity.

[75]  D. Devine,et al.  K1, K5 and O antigens of Escherichia coli in relation to serum killing via the classical and alternative complement pathways. , 1994, Journal of medical microbiology.

[76]  P. Romeo,et al.  Molecular cloning and complete primary sequence of human erythrocyte porphobilinogen deaminase. , 1986, Nucleic acids research.

[77]  M. Achtman,et al.  Role of the capsule and the O antigen in resistance of O18:K1 Escherichia coli to complement-mediated killing , 1983, Infection and immunity.

[78]  M. Herzberg,et al.  Aggregation of human platelets and adhesion of Streptococcus sanguis , 1983, Infection and immunity.

[79]  Thomas Dandekar,et al.  human platelets : a systems biologic analysis of signaling networks in PlateletWeb , 2012 .

[80]  J. Townsend,et al.  NIH Public Access Author Manuscript , 2006 .

[81]  C. Beaumont,et al.  Tissue-specific expression of porphobilinogen deaminase. Two isoenzymes from a single gene. , 1987, European journal of biochemistry.