Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 885 Segmentation and Visualisation of Human Brain Structures

[1]  R P Velthuizen,et al.  MRI segmentation: methods and applications. , 1995, Magnetic resonance imaging.

[2]  G. Sedvall,et al.  Studies on the binding of [3H]flumazenil and [3H]sarmazenil in post‐mortem human brain , 1992 .

[3]  S. Arnborg Human brain informatics: understanding causes of mental illness , 2000 .

[4]  T. Greitz,et al.  Adjustable computerized stereotaxic brain atlas for transmission and emission tomography. , 1983, AJNR. American journal of neuroradiology.

[5]  Karl J. Friston,et al.  Localisation in PET Images: Direct Fitting of the Intercommissural (AC—PC) Line , 1989, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[6]  Lars Eriksson,et al.  Transformations and algorithms in a computerized brain atlas , 1992 .

[7]  R. Kahn,et al.  Automated Separation of Gray and White Matter from MR Images of the Human Brain , 2001, NeuroImage.

[8]  J Toriwaki,et al.  Automatic segmentation of head MRI images by knowledge guided thresholding. , 1991, Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society.

[9]  Joakim Lindblad,et al.  A Comparison of Methods for Estimation of Intensity Non-Uniformities in 2D and 3D Microscope Images of Fluorescence Stained Cells , 2001 .

[10]  Timothy F. Cootes,et al.  Active Shape Models-Their Training and Application , 1995, Comput. Vis. Image Underst..

[11]  Nicholas Ayache,et al.  Automatic Retrieval of Anatomical Structures in 3D Medical Images , 1995, CVRMed.

[12]  J. Mazziotta,et al.  Automated image registration , 1993 .

[13]  Ewert Bengtsson,et al.  Combined Visualisation of Functional and Anatomical Brain Images , 2001 .

[14]  Y. Hurd,et al.  Effects of chronic 17β‐estradiol treatment on the serotonin 5‐HT1A receptor mRNA and binding levels in the rat brain , 2000 .

[15]  J. Ehrhardt,et al.  Measurement of brain structures with artificial neural networks: two- and three-dimensional applications. , 1999, Radiology.

[16]  Ewert Bengtsson,et al.  Automatic Quantification of Immunohistochemically Stained Cell Nuclei Using Unsupervised Image Analysis , 1998, Analytical cellular pathology : the journal of the European Society for Analytical Cellular Pathology.

[17]  D. Berdichevsky,et al.  Improved Methods for Image Registration , 1996, NeuroImage.

[18]  M. Rosenblatt Remarks on Some Nonparametric Estimates of a Density Function , 1956 .

[19]  T Greitz,et al.  Specification and Selection of Regions of Interest (ROIs) in a Computerized Brain Atlas , 1991, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[20]  Jean Serra,et al.  Image Analysis and Mathematical Morphology , 1983 .

[21]  J Malmivuo,et al.  Segmentation of T1 MR scans for reconstruction of resistive head models. , 1997, Computer methods and programs in biomedicine.

[22]  Christer Halldin,et al.  Distribution of D1- and D2-Dopamine Receptors, and Dopamine and Its Metabolites in the Human Brain , 1994, Neuropsychopharmacology.

[23]  K J Zuiderveld,et al.  Normal fusion for three-dimensional integrated visualization of SPECT and magnetic resonance brain images. , 1997, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[24]  S Minoshima,et al.  Quantitative assessment of cerebral blood flow in patients with Alzheimer's disease by SPECT. , 1997, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[25]  Colin Studholme,et al.  An overlap invariant entropy measure of 3D medical image alignment , 1999, Pattern Recognit..

[26]  Paul A. Viola,et al.  Multi-modal volume registration by maximization of mutual information , 1996, Medical Image Anal..

[27]  Lennart Thurfjell,et al.  Segmentation of the Brain in MRI Using Grey Level Morphology and Propagation of Information , 1999 .

[29]  Tom Davis,et al.  Opengl programming guide: the official guide to learning opengl , 1993 .

[30]  Guy Marchal,et al.  Multimodality image registration by maximization of mutual information , 1997, IEEE Transactions on Medical Imaging.

[31]  T. Greitz,et al.  A computerized brain atlas: construction, anatomical content, and some applications. , 1991, Journal of computer assisted tomography.

[32]  Rangasami L. Kashyap,et al.  Building Skeleton Models via 3-D Medial Surface/Axis Thinning Algorithms , 1994, CVGIP Graph. Model. Image Process..

[33]  Lennart Thurfjell,et al.  A 3D Deformable Surface Model to Segment the Brain in MR Images , 1999 .

[34]  Guy Marchal,et al.  Multi-modality image registration by maximization of mutual information , 1996, Proceedings of the Workshop on Mathematical Methods in Biomedical Image Analysis.

[35]  Alan C. Evans,et al.  Anatomical-Functional Correlation Using an Adjustable MRI-Based Region of Interest Atlas with Positron Emission Tomography , 1988, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[36]  M. Mintun,et al.  Automated detection of the intercommissural line for stereotactic localization of functional brain images. , 1993, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[37]  William Schroeder,et al.  The Visualization Toolkit: An Object-Oriented Approach to 3-D Graphics , 1997 .

[38]  Paul A. Viola,et al.  Alignment by Maximization of Mutual Information , 1997, International Journal of Computer Vision.

[39]  M W Vannier,et al.  Three-dimensional hippocampal MR morphometry with high-dimensional transformation of a neuroanatomic atlas. , 1997, Radiology.

[40]  D. Guilloteau,et al.  Visualization of the Dopamine Transporter in the Human Brain Postmortem with the New Selective Ligand [125I]PE2I , 1999, NeuroImage.

[41]  Greg Harris,et al.  Structural MR image processing using the BRAINS2 toolbox. , 2002, Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society.

[42]  A. Dale,et al.  Whole Brain Segmentation Automated Labeling of Neuroanatomical Structures in the Human Brain , 2002, Neuron.

[43]  Guido Gerig,et al.  Elastic model-based segmentation of 3-D neuroradiological data sets , 1999, IEEE Transactions on Medical Imaging.

[44]  Bui Tuong Phong Illumination for computer generated pictures , 1975, Commun. ACM.

[45]  L. Farde,et al.  Positron emission tomography--examination of chemical transmission in the living human brain. Development of radioligands. , 1992, Arzneimittel-Forschung.

[46]  G. Sedvall,et al.  Whole hemisphere autoradiography of the postmortem human brain. , 1998, Nuclear medicine and biology.

[47]  Benoit M. Dawant,et al.  Neural-network-based segmentation of multi-modal medical images: a comparative and prospective study , 1993, IEEE Trans. Medical Imaging.

[48]  Roger Hult Grey-level morphology based segmentation of MRI of the human cortex , 2001, Proceedings 11th International Conference on Image Analysis and Processing.

[49]  N C Andreasen,et al.  Improving tissue classification in MRI: a three-dimensional multispectral discriminant analysis method with automated training class selection. , 1999, Journal of computer assisted tomography.

[50]  R. Bajcsy,et al.  Elastically Deforming 3D Atlas to Match Anatomical Brain Images , 1993, Journal of computer assisted tomography.

[51]  M. Mintun,et al.  Enhanced Detection of Focal Brain Responses Using Intersubject Averaging and Change-Distribution Analysis of Subtracted PET Images , 1988, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[52]  Guy Marchal,et al.  Automated multi-moda lity image registration based on information theory , 1995 .

[53]  Jesper L. R. Andersson,et al.  A RAPID AND ACCURATE METHOD TO REALIGN PET SCANS UTILIZING IMAGE EDGE INFORMATION , 1995 .

[54]  L. Thurfjell,et al.  Implementation and validation of a fully automatic system for intra- and interindividual registration of PET brain scans. , 1997, Journal of computer assisted tomography.

[55]  Peter Meer,et al.  Robust retrieval of 3D structures from magnetic resonance images , 1996, Proceedings of 13th International Conference on Pattern Recognition.

[56]  M. Raichle,et al.  A Stereotactic Method of Anatomical Localization for Positron Emission Tomography , 1985, Journal of computer assisted tomography.

[57]  Karl J. Friston,et al.  Assessing the significance of focal activations using their spatial extent , 1994, Human brain mapping.

[58]  Joakim Lindblad Histogram thresholding using kernel density estimates , 2000 .

[59]  J R Moeller,et al.  A Regional Covariance Approach to the Analysis of Functional Patterns in Positron Emission Tomographic Data , 1991, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[60]  William E. Lorensen,et al.  Marching cubes: A high resolution 3D surface construction algorithm , 1987, SIGGRAPH.

[61]  Ewert Bengtsson,et al.  Surface Construction Especially Suited for Visualization of Thin Structures , 1997 .

[62]  Russell M. Mersereau,et al.  Automatic detection of brain contours in MRI data sets. , 1993, IEEE transactions on medical imaging.

[63]  Y. Hurd,et al.  Human brain imaging post-mortem - whole hemisphere technologies , 2001 .

[64]  R Momenan,et al.  Intensity‐adaptive segmentation of single‐echo T1‐weighted magnetic resonance images , 1997, Human brain mapping.

[65]  Katarina Varnäs,et al.  Autoradiographic mapping of 5-HT1B and 5-HT1D receptors in the post mortem human brain using [3H]GR 125743 , 2001, Brain Research.

[66]  Christer Halldin,et al.  Autoradiographic localization of extrastriatal D2‐dopamine receptors in the human brain using [125I]epidepride , 1996, Synapse.

[67]  Timothy F. Cootes,et al.  Active shape models , 1998 .

[68]  Lawrence O. Hall,et al.  Knowledge-based classification and tissue labeling of MR images of human brain , 1993, IEEE Trans. Medical Imaging.

[69]  R A Robb,et al.  Interactive display and analysis of 3-D medical images. , 1989, IEEE transactions on medical imaging.

[70]  C. Halldin,et al.  Autoradiographic distribution of serotonin transporters and receptor subtypes in human brain , 2004, Human brain mapping.

[71]  Lennart Thurfjell An Adjustable 3D Brain Atlas for Quantitative Analysis of Neuroimaging Data : Algorithmical and Methodological Aspects , 1994 .

[72]  C. Bohm,et al.  A data base library as a diagnostic aid in neuroimaging , 1991 .

[73]  Nick C Fox,et al.  Automated Hippocampal Segmentation by Regional Fluid Registration of Serial MRI: Validation and Application in Alzheimer's Disease , 2001, NeuroImage.

[74]  E. Parzen On Estimation of a Probability Density Function and Mode , 1962 .

[75]  Roger Lundqvist Atlas-Based Fusion of Medical Brain Images : Methods and Applications , 2001 .

[76]  Max A. Viergever,et al.  Image registration by maximization of combined mutual information and gradient information , 2000, IEEE Transactions on Medical Imaging.

[77]  G. Sedvall,et al.  Monoamines and schizophrenia , 1990, Acta psychiatrica Scandinavica. Supplementum.

[78]  R. Koeppe,et al.  Anatomic standardization: linear scaling and nonlinear warping of functional brain images. , 1994, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[79]  Steven W. Zucker,et al.  Region growing: Childhood and adolescence* , 1976 .

[80]  Jayaram K. Udupa,et al.  Fast surface tracking in three-dimensional binary images , 1989, Comput. Vis. Graph. Image Process..

[81]  L Thurfjell,et al.  CBA--an atlas-based software tool used to facilitate the interpretation of neuroimaging data. , 1995, Computer methods and programs in biomedicine.

[82]  Richard Szeliski,et al.  Matching 3-D anatomical surfaces with non-rigid deformations using octree-splines , 1993, Proceedings of IEEE Workshop on Biomedical Image Analysis.

[83]  Max A. Viergever,et al.  A survey of medical image registration , 1998, Medical Image Anal..

[84]  G. Sedvall,et al.  Autoradiographic localization of 5‐HT2A receptors in the human brain using [3H]M100907 and [11C]M100907 , 2000, Synapse.

[85]  Victor W. Pike,et al.  Distribution of 5-HT4 receptors in the postmortem human brain—an autoradiographic study using [125I]SB 207710 , 2003, European Neuropsychopharmacology.

[86]  Karl J. Friston,et al.  Comparing Functional (PET) Images: The Assessment of Significant Change , 1991, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[87]  D L Hill,et al.  Automated three-dimensional registration of magnetic resonance and positron emission tomography brain images by multiresolution optimization of voxel similarity measures. , 1997, Medical physics.

[88]  Benoit M. Dawant,et al.  Morphometric analysis of white matter lesions in MR images: method and validation , 1994, IEEE Trans. Medical Imaging.

[89]  Roger Hult Segmentation of T1-MRI of the Human Cortex Using a 3D Grey-level Morphology Approach , 2003, SCIA.

[90]  N C Andreasen,et al.  A new method for the in vivo volumetric measurement of the human hippocampus with high neuroanatomical accuracy , 2000, Hippocampus.

[91]  W. A. Hanson,et al.  Interactive 3D segmentation of MRI and CT volumes using morphological operations. , 1992, Journal of computer assisted tomography.

[92]  David H. Laidlaw,et al.  Partial-volume Bayesian classification of material mixtures in MR volume data using voxel histograms , 1997, IEEE Transactions on Medical Imaging.

[93]  J. Tiihonen,et al.  Serotonin transporter distribution and density in the cerebral cortex of alcoholic and nonalcoholic comparison subjects: a whole-hemisphere autoradiography study. , 2002, The American journal of psychiatry.

[94]  Avinash C. Kak,et al.  Principles of computerized tomographic imaging , 2001, Classics in applied mathematics.

[95]  Max A. Viergever,et al.  Automatic Morphology-Based Brain Segmentation (MBRASE) from MRI-T1 Data , 2000, NeuroImage.

[96]  M. Stella Atkins,et al.  Fully automatic segmentation of the brain in MRI , 1998, IEEE Transactions on Medical Imaging.