Functional characterization of two SOS-regulated genes involved in mitomycin C resistance in Caulobacter crescentus.
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R. Galhardo | Carina O Lopes-Kulishev | Ingrid R Alves | Estela Y Valencia | María I Pidhirnyj | Frank S Fernández-Silva | Ticiane R Rodrigues | Cristiane R Guzzo | Rodrigo S Galhardo | E. Valencia | C. Guzzo | I. R. Alves | T. Rodrigues
[1] C. F. Menck,et al. Genome analysis of DNA repair genes in the alpha proteobacterium Caulobacter crescentus , 2007, BMC Microbiology.
[2] Č. Venclovas,et al. Essential roles for imuA′- and imuB-encoded accessory factors in DnaE2-dependent mutagenesis in Mycobacterium tuberculosis , 2010, Proceedings of the National Academy of Sciences.
[3] C. Trotta,et al. Crystal structure and evolution of a transfer RNA splicing enzyme. , 1998, Science.
[4] I. Minko,et al. Replication Bypass of Interstrand Cross-link Intermediates by Escherichia coli DNA Polymerase IV* , 2008, Journal of Biological Chemistry.
[5] Steven R. Head,et al. Defining the Pseudomonas aeruginosa SOS Response and Its Role in the Global Response to the Antibiotic Ciprofloxacin , 2006, Journal of bacteriology.
[6] D. Sherman,et al. Mitomycin Resistance in Streptomyces lavendulae Includes a Novel Drug-Binding-Protein-Dependent Export System , 1999, Journal of bacteriology.
[7] Dale B. Wigley,et al. Crystal structure of RecBCD enzyme reveals a machine for processing DNA breaks , 2004, Nature.
[8] Zemer Gitai,et al. BapE DNA endonuclease induces an apoptotic-like response to DNA damage in Caulobacter , 2012, Proceedings of the National Academy of Sciences.
[9] C. Kenyon,et al. Inducibility of a gene product required for UV and chemical mutagenesis in Escherichia coli. , 1981, Proceedings of the National Academy of Sciences of the United States of America.
[10] A. Pühler,et al. A Broad Host Range Mobilization System for In Vivo Genetic Engineering: Transposon Mutagenesis in Gram Negative Bacteria , 1983, Bio/Technology.
[11] M. Berardini,et al. Evidence for a recombination-independent pathway for the repair of DNA interstrand cross-links based on a site-specific study with nitrogen mustard. , 1997, Biochemistry.
[12] C. Menck,et al. An SOS-regulated operon involved in damage-inducible mutagenesis in Caulobacter crescentus , 2005, Nucleic acids research.
[13] Jeffrey W. Roberts,et al. Nature of the SOS-inducing signal in Escherichia coli. The involvement of DNA replication. , 1990, Journal of molecular biology.
[14] N. Danshiitsoodol,et al. The mitomycin C (MMC)-binding protein from MMC-producing microorganisms protects from the lethal effect of bleomycin: crystallographic analysis to elucidate the binding mode of the antibiotic to the protein. , 2006, Journal of molecular biology.
[15] D. Lilley,et al. The active site of the junction-resolving enzyme T7 endonuclease I. , 2001, Journal of molecular biology.
[16] Ivan Erill,et al. Aeons of distress: an evolutionary perspective on the bacterial SOS response. , 2007, FEMS microbiology reviews.
[17] A. Pingoud,et al. Type II restriction endonucleases: structure and mechanism , 2005, Cellular and Molecular Life Sciences.
[18] Č. Venclovas,et al. Identification of new homologs of PD-(D/E)XK nucleases by support vector machines trained on data derived from profile–profile alignments , 2010, Nucleic acids research.
[19] E V Koonin,et al. SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories. , 2000, Nucleic acids research.
[20] M. Tomasz,et al. Mitomycin C: small, fast and deadly (but very selective). , 1995, Chemistry & biology.
[21] R. Huber,et al. The crystal structure of the rare-cutting restriction enzyme SdaI reveals unexpected domain architecture. , 2006, Structure.
[22] R. Ghirlando,et al. MutH complexed with hemi- and unmethylated DNAs: coupling base recognition and DNA cleavage. , 2005, Molecular cell.
[23] Clifton E. Barry,et al. DnaE2 Polymerase Contributes to In Vivo Survival and the Emergence of Drug Resistance in Mycobacterium tuberculosis , 2003, Cell.
[24] N. Agabian,et al. Envelope-associated nucleoid from Caulobacter crescentus stalked and swarmer cells , 1977, Journal of bacteriology.
[25] Robert D. Finn,et al. The Pfam protein families database , 2004, Nucleic Acids Res..
[26] Marcin Feder,et al. Identification of a new family of putative PD-(D/E)XK nucleases with unusual phylogenomic distribution and a new type of the active site , 2005, BMC Genomics.
[27] D. Sherman,et al. Characterization of a mitomycin-binding drug resistance mechanism from the producing organism, Streptomyces lavendulae , 1997, Journal of Bacteriology.
[28] Kevin Cowtan,et al. research papers Acta Crystallographica Section D Biological , 2005 .
[29] M. Alley,et al. Proteolysis of the Caulobacter McpA Chemoreceptor Is Cell Cycle Regulated by a ClpX-Dependent Pathway , 2001, Journal of bacteriology.
[30] Liisa Holm,et al. Dali server: conservation mapping in 3D , 2010, Nucleic Acids Res..
[31] K. Yamaya,et al. Characterization of the mutational specificity of DNA cross-linking mutagens by the Lac+ reversion assay with Escherichia coli. , 2001, Teratogenesis, carcinogenesis, and mutagenesis.
[32] T. Kunkel,et al. The Y-family of DNA polymerases. , 2001, Molecular cell.
[33] M. F. White,et al. Structure of an XPF endonuclease with and without DNA suggests a model for substrate recognition , 2005, The EMBO journal.
[34] S. Holbrook,et al. Action mechanism of ABC excision nuclease on a DNA substrate containing a psoralen crosslink at a defined position. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[35] C. B. Monteiro-Vitorello,et al. Leptospira interrogans serovar Copenhageni Harbors Two lexA Genes Involved in SOS Response , 2013, PloS one.
[36] Leszek Rychlewski,et al. Sequence, structure and functional diversity of PD-(D/E)XK phosphodiesterase superfamily , 2012, Nucleic acids research.
[37] R. Armstrong,et al. Fosfomycin resistance protein (FosA) is a manganese metalloglutathione transferase related to glyoxalase I and the extradiol dioxygenases. , 1997, Biochemistry.
[38] Joshua W. Modell,et al. A DNA damage checkpoint in Caulobacter crescentus inhibits cell division through a direct interaction with FtsW. , 2011, Genes & development.
[39] A. Pardee,et al. Model for regulation of Escherichia coli DNA repair functions. , 1975, Proceedings of the National Academy of Sciences of the United States of America.
[40] C. McHenry. Breaking the rules: bacteria that use several DNA polymerase IIIs , 2011, EMBO reports.
[41] M. Tomasz,et al. The major mitomycin C-DNA monoadduct is cytotoxic but not mutagenic in Escherichia coli. , 1998, Chemical research in toxicology.
[42] M. Tang,et al. Repair of mitomycin C mono- and interstrand cross-linked DNA adducts by UvrABC: a new model , 2010, Nucleic acids research.
[43] J. Courcelle,et al. Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli. , 2001, Genetics.
[44] Ivan Erill,et al. Differences in LexA regulon structure among Proteobacteria through in vivo assisted comparative genomics. , 2004, Nucleic acids research.
[45] M. Berardini,et al. DNA Polymerase II (polB) Is Involved in a New DNA Repair Pathway for DNA Interstrand Cross-Links inEscherichia coli , 1999, Journal of bacteriology.
[46] L. Shapiro,et al. Identification of a Caulobacter crescentus operon encoding hrcA, involved in negatively regulating heat-inducible transcription, and the chaperone gene grpE , 1996, Journal of bacteriology.
[47] C. Menck,et al. Characterization of the SOS Regulon of Caulobacter crescentus , 2007, Journal of bacteriology.
[48] Jeffrey H. Miller. A Short Course in Bacterial Genetics: A Laboratory Manual and Handbook for Escherichia coli and Rela , 1992 .
[49] T. Nohmi,et al. Effects of the umuDC, mucAB, and samAB operons on the mutational specificity of chemical mutagenesis in Escherichia coli: II. Base substitution mutagenesis. , 1994, Mutation research.
[50] J. Bitinaite,et al. Structure of FokI has implications for DNA cleavage. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[51] Yunje Cho,et al. Crystal structure of the Mus81-Eme1 complex. , 2008, Genes & development.
[52] A. Aggarwal,et al. Structure of restriction endonuclease BamHI and its relationship to EcoRI , 1994, Nature.
[53] Ivan Erill,et al. Dispersal and regulation of an adaptive mutagenesis cassette in the bacteria domain , 2006, Nucleic acids research.
[54] D. Mount,et al. The SOS regulatory system of Escherichia coli , 1982, Cell.
[55] J. M. Hinz. Role of homologous recombination in DNA interstrand crosslink repair , 2010, Environmental and molecular mutagenesis.
[56] L. Holm,et al. The Pfam protein families database , 2005, Nucleic Acids Res..
[57] M. Sternberg,et al. Protein structure prediction on the Web: a case study using the Phyre server , 2009, Nature Protocols.
[58] F. Dyda,et al. Unexpected structural diversity in DNA recombination: the restriction endonuclease connection. , 2000, Molecular cell.
[59] Takesi Kato,et al. Isolation and characterization of mutants of Escherichia coli deficient in induction of mutations by ultraviolet light , 1977, Molecular and General Genetics MGG.