An automated mapping method for Nissl-stained mouse brain histologic sections
暂无分享,去创建一个
Smadar Shiffman | Sayantani Basak | Cleopatra Kozlowski | Reina N. Fuji | Cleopatra Kozlowski | S. Shiffman | R. Fuji | Sayantani M. Basak
[1] Vincent Frouin,et al. Validation of MRI-based 3D digital atlas registration with histological and autoradiographic volumes: An anatomofunctional transgenic mouse brain imaging study , 2010, NeuroImage.
[2] K. Scearce-Levie,et al. Antibody-Mediated Targeting of Tau In Vivo Does Not Require Effector Function and Microglial Engagement. , 2016, Cell reports.
[3] R. Mark Henkelman,et al. Variability of brain anatomy for three common mouse strains , 2016, NeuroImage.
[4] Allan R. Jones,et al. The Allen Brain Atlas: 5 years and beyond , 2009, Nature Reviews Neuroscience.
[5] Cleopatra Kozlowski,et al. An Automated Method to Quantify Microglia Morphology and Application to Monitor Activation State Longitudinally In Vivo , 2012, PloS one.
[6] R. Switzer,et al. Recommended Neuroanatomical Sampling Practices for Comprehensive Brain Evaluation in Nonclinical Safety Studies , 2011, Toxicologic pathology.
[7] Allan R. Jones,et al. Genome-wide atlas of gene expression in the adult mouse brain , 2007, Nature.
[8] R. Mark Henkelman,et al. High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice , 2008, NeuroImage.
[9] Zaher Dawy,et al. Mutual information based distance measures for classification and content recognition with applications to genetics , 2005, IEEE International Conference on Communications, 2005. ICC 2005. 2005.
[10] Dinggang Shen,et al. Automated Segmentation of Mouse Brain Images Using Multi-Atlas Multi-ROI Deformation and Label Fusion , 2012, Neuroinformatics.
[11] Xin Wu,et al. Neurostereology protocol for unbiased quantification of neuronal injury and neurodegeneration , 2015, Front. Aging Neurosci..
[12] Cornelis H. Slump,et al. MRI modalitiy transformation in demon registration , 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
[13] Sébastien Ourselin,et al. Automatic Structural Parcellation of Mouse Brain MRI Using Multi-Atlas Label Fusion , 2014, PloS one.
[14] Liron Pantanowitz,et al. Relationship between magnification and resolution in digital pathology systems , 2013, Journal of pathology informatics.
[15] Nathalie Mandairon,et al. Non-imaged based method for matching brains in a common anatomical space for cellular imagery , 2018, Journal of Neuroscience Methods.
[16] Marc Dhenain,et al. High-throughput 3D whole-brain quantitative histopathology in rodents , 2016, Scientific Reports.
[17] Max A. Viergever,et al. A survey of medical image registration , 1998, Medical Image Anal..
[18] Shraddha Pai,et al. Semi-automated atlas-based analysis of brain histological sections , 2011, Journal of Neuroscience Methods.
[19] Anders M. Dale,et al. Automated segmentation of neuroanatomical structures in multispectral MR microscopy of the mouse brain , 2005, NeuroImage.
[20] Scott E Fraser,et al. Magnetic resonance microscopy: recent advances and applications. , 2005, Current opinion in biotechnology.
[21] R. Garman,et al. STP Position Paper , 2013, Toxicologic pathology.
[22] Anders M. Dale,et al. Automated segmentation of the actively stained mouse brain using multi-spectral MR microscopy , 2008, NeuroImage.
[23] Hongkui Zeng,et al. Neuroinformatics of the Allen Mouse Brain Connectivity Atlas. , 2015, Methods.
[24] Joni-Kristian Kämäräinen,et al. Invariance properties of Gabor filter-based features-overview and applications , 2006, IEEE Transactions on Image Processing.
[25] Max A. Viergever,et al. Mutual-information-based registration of medical images: a survey , 2003, IEEE Transactions on Medical Imaging.
[26] Saman A. Zonouz,et al. CloudID: Trustworthy cloud-based and cross-enterprise biometric identification , 2015, Expert Syst. Appl..
[27] Douglas M. Bowden,et al. NeuroNames: An Ontology for the BrainInfo Portal to Neuroscience on the Web , 2011, Neuroinformatics.
[28] Johan H C Reiber,et al. Automated Segmentation of in Vivo and Ex Vivo Mouse Brain Magnetic Resonance Images , 2009, Molecular imaging.
[29] George Paxinos,et al. The Mouse Brain in Stereotaxic Coordinates , 2001 .
[30] Martin Styner,et al. Parametric estimate of intensity inhomogeneities applied to MRI , 2000, IEEE Transactions on Medical Imaging.