Preparation and Extraction of Insoluble (Inclusion‐Body) Proteins from Escherichia coli

High‐level expression of many recombinant proteins in Escherichia coli leads to the formation of highly aggregated protein commonly referred to as inclusion bodies. Inclusion bodies are normally formed in the cytoplasm; alternatively, if a secretion vector is used, they can form in the periplasmic space. Inclusion bodies can be recovered from cell lysates and this unit describes preparation of washed pellets and solubilization of the protein using guanidine⋅HCl. The extracted protein, which is unfolded, is either directly folded as described in UNIT or further purified by gel filtration in the presence of guanidine⋅HCl as idescribed here. A support protocol describes the removal of guanidine⋅HCl from column fractions so they can be monitored by SDS‐PAGE.

[1]  Daniel I. C. Wang,et al.  Specific aggregation of partially folded polypeptide chains: The molecular basis of inclusion body composition , 1996, Nature Biotechnology.

[2]  J. Kane,et al.  Properties of recombinant protein-containing inclusion bodies in Escherichia coli. , 1991, Bioprocess technology.

[3]  J. Swartz,et al.  Single-Step Solubilization and Folding of IGF-1 Aggregates fromEscherichia coli , 1993 .

[4]  K. Mann,et al.  The estimation of polypeptide chain molecular weights by gel filtration in 6 M guanidine hydrochloride. , 1969, The Journal of biological chemistry.

[5]  K. Mann,et al.  Protein polypeptide chain molecular weights by gel chromatography in guanidinium chloride. , 1972, Methods in enzymology.

[6]  R. Seckler,et al.  Protein folding and protein refolding , 1992, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[7]  B. Kelley,et al.  Effect of Inclusion Body Contaminants on the Oxidative Renaturation of Hen Egg White Lysozyme , 1997, Biotechnology progress.

[8]  T. Creighton,et al.  Folding proteins , 1990, Nature.

[9]  A. Fink,et al.  Nativelike secondary structure in interleukin-1 beta inclusion bodies by attenuated total reflectance FTIR. , 1994, Biochemistry.

[10]  C. Tanford Protein denaturation. , 1968, Advances in protein chemistry.

[11]  K. S. Iyer,et al.  Direct spectrophotometric measurement of the rate of reduction of disulfide bonds. The reactivity of the disulfide bonds of bovine -lactalbumin. , 1973, The Journal of biological chemistry.

[12]  E Schwarz,et al.  Inhibition of aggregation side reactions during in vitro protein folding. , 1999, Methods in enzymology.

[13]  R. Pepinsky Selective precipitation of proteins from guanidine hydrochloride-containing solutions with ethanol. , 1991, Analytical biochemistry.

[14]  I. Otterness,et al.  Isolation and characterization of biologically active murine interleukin-1α derived from expression of a synthetic gene in Escherichia coli , 1989 .

[15]  A. Klibanov,et al.  Why does ribonuclease irreversibly inactivate at high temperatures? , 1986, Biochemistry.

[16]  C. Anfinsen Principles that govern the folding of protein chains. , 1973, Science.

[17]  A. Gronenborn,et al.  The extracellular domain of immunodeficiency virus gp41 protein: Expression in Escherichia coli, purification, and crystallization , 1997, Protein science : a publication of the Protein Society.

[18]  R. Burgess,et al.  Overproduction and Purification of σS, theEscherichia coliStationary Phase Specific Sigma Transcription Factor , 1996 .

[19]  K. Bren Mechanisms of Protein Folding, 2nd ed Edited by R. H. Pain (Jozef Stefan Institute, Liubljana, Slovenia). Part of the Frontiers in Molecular Biology Series. Oxford University Press: Oxford. 2001. xxvi + 434 pp. $120.00. ISBN: 0-19-963788-1. , 2001 .

[20]  T. Boone,et al.  Recombinant-DNA-derived bovine growth hormone from Escherichia coli. 1. Demonstration that the hormone is expressed in reduced form, and isolation of the hormone in oxidized, native form. , 1987, European journal of biochemistry.

[21]  D. Eisenberg Proteins. Structures and molecular properties, T.E. Creighton. W. H. Freeman and Company, New York (1984), 515, $36.95 , 1985 .

[22]  B. Moss,et al.  Hydroxylapatite chromatography of protein-sodium dodecyl sulfate complexes. A new method for the separation of polypeptide subunits. , 1972, The Journal of biological chemistry.

[23]  J. Fohlman,et al.  Gel filtration of proteins on Sephacryl S-200 superfine in 6 M guanidine-HCl. , 1978, FEBS letters.

[24]  C. Pace,et al.  A comparison of the effectiveness of protein denaturants for β-lactoglobulin and ribonuclease , 1980 .

[25]  R. Daniel,et al.  The denaturation and degradation of stable enzymes at high temperatures. , 1996, The Biochemical journal.

[26]  D. J. Cowley,et al.  Expression, purification and characterization of recombinant human proinsulin , 1997, FEBS letters.

[27]  P. V. Hippel,et al.  Ion effects on the solution structure of biological macromolecules , 1969 .

[28]  B. Neel,et al.  Solubilization and purification of enzymatically active glutathione S-transferase (pGEX) fusion proteins. , 1993, Analytical biochemistry.

[29]  R. Kastelein,et al.  Expression, renaturation and purification of recombinant human interleukin 4 from Escherichia coli. , 1988, European journal of biochemistry.

[30]  R. Hodges,et al.  Protein denaturation with guanidine hydrochloride or urea provides a different estimate of stability depending on the contributions of electrostatic interactions , 1994, Protein science : a publication of the Protein Society.

[31]  A. R. Fresht Structure and Mechanism in Protein Science: A Guide to Enzyme Catalysis and Protein Folding , 1999 .

[32]  A. Fink Protein aggregation: folding aggregates, inclusion bodies and amyloid. , 1998, Folding & design.