Accounting for Decay of Linkage Disequilibrium in Haplotype Inference and Missing-data Imputation
暂无分享,去创建一个
[1] L. Partridge,et al. Oxford Surveys in Evolutionary Biology , 1991 .
[2] Lawrence R. Rabiner,et al. A tutorial on hidden Markov models and selected applications in speech recognition , 1989, Proc. IEEE.
[3] R. Hudson. Gene genealogies and the coalescent process. , 1990 .
[4] A. Clark,et al. Inference of haplotypes from PCR-amplified samples of diploid populations. , 1990, Molecular biology and evolution.
[5] G. Evans. Practical Numerical Integration , 1993 .
[6] L. Excoffier,et al. Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population. , 1995, Molecular biology and evolution.
[7] K. Kidd,et al. HAPLO: a program using the EM algorithm to estimate the frequencies of multi-site haplotypes. , 1995, The Journal of heredity.
[8] J. Long,et al. An E-M algorithm and testing strategy for multiple-locus haplotypes. , 1995, American journal of human genetics.
[9] David Maxwell Chickering,et al. Dependency Networks for Inference, Collaborative Filtering, and Data Visualization , 2000, J. Mach. Learn. Res..
[10] P. Donnelly,et al. Inference in molecular population genetics , 2000 .
[11] N. Schork,et al. Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data. , 2000, American journal of human genetics.
[12] P. Donnelly,et al. A new statistical method for haplotype reconstruction from population data. , 2001, American journal of human genetics.
[13] M. Daly,et al. High-resolution haplotype structure in the human genome , 2001, Nature Genetics.
[14] Frank Dudbridge,et al. Haplotype tagging for the identification of common disease genes , 2001, Nature Genetics.
[15] Zhaohui S. Qin,et al. Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms. , 2002, American journal of human genetics.
[16] A. Chakravarti,et al. Haplotype inference in random population samples. , 2002, American journal of human genetics.
[17] Zhaohui S. Qin,et al. Partition-ligation-expectation-maximization algorithm for haplotype inference with single-nucleotide polymorphisms. , 2002, American journal of human genetics.
[18] R. Karp,et al. Efficient reconstruction of haplotype structure via perfect phylogeny. , 2002, Journal of bioinformatics and computational biology.
[19] Richard M. Karp,et al. Large scale reconstruction of haplotypes from genotype data , 2003, RECOMB '03.
[20] G. McVean,et al. Estimating recombination rates from population-genetic data , 2003, Nature Reviews Genetics.
[21] Dan Geiger,et al. Model-based inference of haplotype block variation , 2003, RECOMB '03.
[22] M. Stephens,et al. Modelling Linkage Disequilibrium , And Identifying Recombination Hotspots Using SNP Data , 2003 .
[23] Juliet M Chapman,et al. Detecting Disease Associations due to Linkage Disequilibrium Using Haplotype Tags: A Class of Tests and the Determinants of Statistical Power , 2003, Human Heredity.
[24] Peter Donnelly,et al. A comparison of bayesian methods for haplotype reconstruction from population genotype data. , 2003, American journal of human genetics.
[25] M. Stephens,et al. Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data. , 2003, Genetics.
[26] L. Excoffier,et al. Gametic phase estimation over large genomic regions using an adaptive window approach , 2003, Human Genomics.
[27] Deborah A. Nickerson,et al. Additional SNPs and linkage-disequilibrium analyses are necessary for whole-genome association studies in humans , 2003, Nature Genetics.
[28] Ron Shamir,et al. Maximum likelihood resolution of multi-block genotypes , 2004, RECOMB.
[29] Dana C Crawford,et al. Evidence for substantial fine-scale variation in recombination rates across the human genome , 2004, Nature Genetics.
[30] P. Donnelly,et al. The Fine-Scale Structure of Recombination Rate Variation in the Human Genome , 2004, Science.
[31] A. Chakravarti,et al. Haplotype and missing data inference in nuclear families. , 2004, Genome research.
[32] Matthew Stephens,et al. Absence of the TAP2 Human Recombination Hotspot in Chimpanzees , 2004, PLoS biology.
[33] Stephen F. Schaffner,et al. The X chromosome in population genetics , 2004, Nature Reviews Genetics.
[34] Eran Halperin,et al. Haplotype reconstruction from genotype data using Imperfect Phylogeny , 2004, Bioinform..