Selection of novel reference genes for use in the human central nervous system: a BrainNet Europe Study

[1]  Cathy Vaillancourt,et al.  Quantitative PCR Pitfalls: The Case of the Human Placenta , 2012, Molecular Biotechnology.

[2]  P. Riederer,et al.  Inflammatory Pathways in Parkinson's Disease; A BNE Microarray Study , 2012, Parkinson's disease.

[3]  Richard Reynolds,et al.  Innate Immunity in multiple sclerosis white matter lesions: expression of natural cytotoxicity triggering receptor 1 (NCR1) , 2012, Journal of Neuroinflammation.

[4]  R. Cancedda,et al.  Selection of Candidate Housekeeping Genes for Normalization in Human Postmortem Brain Samples , 2011, International journal of molecular sciences.

[5]  Takeya Kasukawa,et al.  Quantitative Expression Profile of Distinct Functional Regions in the Adult Mouse Brain , 2011, PloS one.

[6]  Daniel Bottomly,et al.  Evaluating Gene Expression in C57BL/6J and DBA/2J Mouse Striatum Using RNA-Seq and Microarrays , 2011, PloS one.

[7]  M. Lotze,et al.  The Beclin 1 network regulates autophagy and apoptosis , 2011, Cell Death and Differentiation.

[8]  R. Burgess,et al.  An assessment of mechanisms underlying peripheral axonal degeneration caused by aminoacyl-tRNA synthetase mutations , 2011, Molecular and Cellular Neuroscience.

[9]  Samira N. Kashefi,et al.  Effects of Antemortem and Postmortem Variables on Human Brain mRNA Quality: A BrainNet Europe Study , 2010, Journal of neuropathology and experimental neurology.

[10]  D. Green,et al.  Novel roles for GAPDH in cell death and carcinogenesis , 2009, Cell Death and Differentiation.

[11]  V. Beneš,et al.  The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. , 2009, Clinical chemistry.

[12]  A. Kenworthy,et al.  Lipid rafts, cholesterol, and the brain , 2008, Neuropharmacology.

[13]  P. Schimmel.  Development of tRNA synthetases and connection to genetic code and disease , 2008, Protein science : a publication of the Protein Society.

[14]  Z. Rao,et al.  Structure of Human Cytosolic X-prolyl Aminopeptidase , 2008, Journal of Biological Chemistry.

[15]  J. Trojanowski,et al.  Variations in the progranulin gene affect global gene expression in frontotemporal lobar degeneration. , 2008, Human molecular genetics.

[16]  R. Ravid,et al.  Bmc Molecular Biology Identification of Valid Reference Genes for the Normalization of Rt Qpcr Gene Expression Data in Human Brain Tissue , 2022 .

[17]  Jun Yu,et al.  How many human genes can be defined as housekeeping with current expression data? , 2008, BMC Genomics.

[18]  Y. Xing,et al.  A Transcriptome Database for Astrocytes, Neurons, and Oligodendrocytes: A New Resource for Understanding Brain Development and Function , 2008, The Journal of Neuroscience.

[19]  W. Ruan,et al.  Actin, a reliable marker of internal control? , 2007, Clinica chimica acta; international journal of clinical chemistry.

[20]  D. Klionsky,et al.  Physiological functions of Atg6/Beclin 1: a unique autophagy-related protein , 2007, Cell Research.

[21]  W. Kamps,et al.  Evidence Based Selection of Housekeeping Genes , 2007, PloS one.

[22]  Bernd Bukau,et al.  The N-end rule pathway for regulated proteolysis: prokaryotic and eukaryotic strategies. , 2007, Trends in cell biology.

[23]  S. S. Koh,et al.  Identification of novel universal housekeeping genes by statistical analysis of microarray data. , 2007, Journal of biochemistry and molecular biology.

[24]  Y. Hurd,et al.  Validation of endogenous controls for quantitative gene expression analysis: Application on brain cortices of human chronic alcoholics , 2007, Brain Research.

[25]  S. Ackerman,et al.  Editing-defective tRNA synthetase causes protein misfolding and neurodegeneration , 2006, Nature.

[26]  I. Ferrer,et al.  TaqMan PCR assay in the control of RNA normalization in human post-mortem brain tissue , 2006, Neurochemistry International.

[27]  Hongyue Dai,et al.  Rosetta error model for gene expression analysis , 2006, Bioinform..

[28]  Björn Sjögreen,et al.  The real-time polymerase chain reaction. , 2006, Molecular aspects of medicine.

[29]  E. Shohami,et al.  Neurodegeneration Induces Upregulation of Beclin 1 , 2006, Autophagy.

[30]  K Dheda,et al.  The implications of using an inappropriate reference gene for real-time reverse transcription PCR data normalization. , 2005, Analytical biochemistry.

[31]  Liat Mizrachy,et al.  Closed head injury induces upregulation of Beclin 1 at the cortical site of injury. , 2005, Journal of neurotrauma.

[32]  K Dheda,et al.  Real-time RT-PCR normalisation; strategies and considerations , 2005, Genes and Immunity.

[33]  S A Bustin,et al.  Quantitative real-time RT-PCR--a perspective. , 2005, Journal of molecular endocrinology.

[34]  Stephen A. Bustin,et al.  A-Z of Quantitative PCR , 2004 .

[35]  E. Levanon,et al.  Human housekeeping genes are compact. , 2003, Trends in genetics : TIG.

[36]  N. Heintz,et al.  A Novel Protein Complex Linking the δ2 Glutamate Receptor and Autophagy Implications for Neurodegeneration in Lurcher Mice , 2002, Neuron.

[37]  S A Bustin,et al.  Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems. , 2002, Journal of molecular endocrinology.

[38]  F. Speleman,et al.  Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes , 2002, Genome Biology.

[39]  A. Orth,et al.  Large-scale analysis of the human and mouse transcriptomes , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[40]  G. Stephanopoulos,et al.  A compendium of gene expression in normal human tissues. , 2001, Physiological genomics.

[41]  Thomas D. Schmittgen,et al.  Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR. , 2000, Journal of biochemical and biophysical methods.

[42]  S. Bustin.  Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays. , 2000, Journal of molecular endocrinology.

[43]  J. Warrington,et al.  Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes. , 2000, Physiological genomics.

[44]  B. Matthews,et al.  Structure and function of the methionine aminopeptidases. , 2000, Biochimica et biophysica acta.

[45]  T. Grisar,et al.  Housekeeping genes as internal standards: use and limits. , 1999, Journal of biotechnology.

[46]  M A Sirover,et al.  New insights into an old protein: the functional diversity of mammalian glyceraldehyde-3-phosphate dehydrogenase. , 1999, Biochimica et biophysica acta.

[47]  B. Matthews,et al.  Sequence and structure comparison suggest that methionine aminopeptidase, prolidase, aminopeptidase P, and creatinase share a common fold. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[48]  R. M. Adibhatla,et al.  Altered lipid metabolism in brain injury and disorders. , 2008, Sub-cellular biochemistry.

[49]  G. Fairn,et al.  Emerging roles of the oxysterol-binding protein family in metabolism, transport, and signaling , 2007, Cellular and Molecular Life Sciences.

[50]  M. Solanas,et al.  Unsuitability of using ribosomal RNA as loading control for Northern blot analyses related to the imbalance between messenger and ribosomal RNA content in rat mammary tumors. , 2001, Analytical biochemistry.

[51]  J. Barciszewski,et al.  The new aspects of aminoacyl-tRNA synthetases. , 2000, Acta biochimica Polonica.

[52]  N. Ridgway,et al.  Chinese hamster ovary cells overexpressing the oxysterol binding protein (OSBP) display enhanced synthesis of sphingomyelin in response to 25-hydroxycholesterol. , 1999, Journal of lipid research.

[53]  G. Vanhoof,et al.  Human lymphocyte X-prolyl aminopeptidase (aminopeptidase P)-like protein. A new member of the proline peptidase family? , 1997, Advances in experimental medicine and biology.

[54]  W. Thomson,et al.  Localisation of eight additional genes in the human major histocompatibility complex, including the gene encoding the casein kinase II beta subunit, and DNA sequence analysis of the class III region. , 1996, DNA sequence : the journal of DNA sequencing and mapping.