Theoretical analysis of the unusual temperature dependence of the kinetic isotope effect in quinol oxidation.

In this paper we present theoretical calculations on model biomimetic systems for quinol oxidation. In these model systems, an excited-state [Ru(bpy)(2)(pbim)](+) complex (bpy = 2,2'-dipyridyl, pbim = 2-(2-pyridyl)benzimidazolate) oxidizes a ubiquinol or plastoquinol analogue in acetonitrile. The charge transfer reaction occurs via a proton-coupled electron transfer (PCET) mechanism, in which an electron is transferred from the quinol to the Ru and a proton is transferred from the quinol to the pbim(-) ligand. The experimentally measured average kinetic isotope effects (KIEs) at 296 K are 1.87 and 3.45 for the ubiquinol and plastoquinol analogues, respectively, and the KIE decreases with temperature for plastoquinol but increases with temperature for ubiquinol. The present calculations provide a possible explanation for the differences in magnitudes and temperature dependences of the KIEs for the two systems and, in particular, an explanation for the unusual inverse temperature dependence of the KIE for the ubiquinol analogue. These calculations are based on a general theoretical formulation for PCET reactions that includes quantum mechanical effects of the electrons and transferring proton, as well as the solvent reorganization and proton donor-acceptor motion. The physical properties of the system that enable the inverse temperature dependence of the KIE are a stiff hydrogen bond, which corresponds to a high-frequency proton donor-acceptor motion, and small inner-sphere and solvent reorganization energies. The inverse temperature dependence of the KIE may be observed if the 0/0 pair of reactant/product vibronic states is in the inverted Marcus region, while the 0/1 pair of reactant/product vibronic states is in the normal Marcus region and is the dominant contributor to the overall rate. In this case, the free energy barrier for the dominant transition is lower for deuterium than for hydrogen because of the smaller splittings between the vibronic energy levels for deuterium, and the KIE increases with increasing temperature. The temperature dependence of the KIE is found to be very sensitive to the interplay among the driving force, the reorganization energy, and the vibronic coupling in this regime.

[1]  J. Hynes,et al.  Kinetic Isotope Effects for Nonadiabatic Proton Transfer Reactions in a Polar Environment. 2. Comparison with an Electronically Diabatic Description , 2004 .

[2]  David M Kramer,et al.  Understanding the cytochrome bc complexes by what they don't do. The Q-cycle at 30. , 2006, Trends in plant science.

[3]  R. Marcus Relation between charge transfer absorption and fluorescence spectra and the inverted region , 1989 .

[4]  H. Buergi,et al.  CRYSTAL AND MOLECULAR STRUCTURES OF RU(BPY)3(PF6)3 AND RU(BPY)3(PF6)2 AT 105 K , 1992 .

[5]  M. Sutcliffe,et al.  Atomistic insight into the origin of the temperature-dependence of kinetic isotope effects and H-tunnelling in enzyme systems is revealed through combined experimental studies and biomolecular simulation. , 2008, Biochemical Society transactions.

[6]  W. R. Wadt,et al.  Ab initio effective core potentials for molecular calculations , 1984 .

[7]  J. Tomasi,et al.  Electrostatic interaction of a solute with a continuum. A direct utilizaion of AB initio molecular potentials for the prevision of solvent effects , 1981 .

[8]  M. V. Basilevsky,et al.  A frequency-resolved cavity model (FRCM) for treating equilibrium and non-equilibrium solvation energies. 2: Evaluation of solvent reorganization energies , 1998 .

[9]  Jacopo Tomasi,et al.  A new definition of cavities for the computation of solvation free energies by the polarizable continuum model , 1997 .

[10]  A. Stuchebrukhov,et al.  Concerted electron and proton transfer: Transition from nonadiabatic to adiabatic proton tunneling , 2000 .

[11]  James M Mayer,et al.  Proton-coupled electron transfer: a reaction chemist's view. , 2004, Annual review of physical chemistry.

[12]  T. Meyer,et al.  Proton-coupled electron transfer. , 2007, Chemical reviews.

[13]  S. Hammes-Schiffer,et al.  Proton-coupled electron transfer in soybean lipoxygenase: dynamical behavior and temperature dependence of kinetic isotope effects. , 2007, Journal of the American Chemical Society.

[14]  Sharon Hammes-Schiffer,et al.  Proton-coupled electron transfer in solution, proteins, and electrochemistry. , 2008, The journal of physical chemistry. B.

[15]  K. Peters A theory-experiment conundrum for proton transfer. , 2009, Accounts of chemical research.

[16]  Judith P Klinman,et al.  Temperature-dependent isotope effects in soybean lipoxygenase-1: correlating hydrogen tunneling with protein dynamics. , 2002, Journal of the American Chemical Society.

[17]  Sharon Hammes-Schiffer,et al.  Calculation of vibronic couplings for phenoxyl/phenol and benzyl/toluene self-exchange reactions: implications for proton-coupled electron transfer mechanisms. , 2006, Journal of the American Chemical Society.

[18]  H. Decornez,et al.  Theoretical study of electron, proton, and proton-coupled electron transfer in iron bi-imidazoline complexes. , 2001, Journal of the American Chemical Society.

[19]  S. Schwartz,et al.  Internal Enzyme Motions as a Source of Catalytic Activity: Rate-Promoting Vibrations and Hydrogen Tunneling , 2001 .

[20]  J. Hynes,et al.  Kinetic isotope effects for nonadiabatic proton transfer reactions in a polar environment. 1. Interpretation of tunneling kinetic isotopic effects , 2004 .

[21]  W. Siebrand,et al.  Temperature dependence of kinetic isotope effects for enzymatic carbon-hydrogen bond cleavage , 2004 .

[22]  Parr,et al.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. , 1988, Physical review. B, Condensed matter.

[23]  S. Nagaoka,et al.  Tunneling effect in the regeneration reaction of vitamin E by ubiquinol , 1998 .

[24]  C. Breneman,et al.  Determining atom‐centered monopoles from molecular electrostatic potentials. The need for high sampling density in formamide conformational analysis , 1990 .

[25]  M. Bowman,et al.  Reaction intermediates of quinol oxidation in a photoactivatable system that mimics electron transfer in the cytochrome bc1 complex. , 2005, Journal of the American Chemical Society.

[26]  Sharon Hammes-Schiffer,et al.  Quantum and dynamical effects of proton donor-acceptor vibrational motion in nonadiabatic proton-coupled electron transfer reactions. , 2005, The Journal of chemical physics.

[27]  M. P. Meyer,et al.  Modeling temperature dependent kinetic isotope effects for hydrogen transfer in a series of soybean lipoxygenase mutants: The effect of anharmonicity upon transfer distance. , 2005, Chemical physics.

[28]  M. V. Basilevsky,et al.  A frequency-resolved cavity model (FRCM) for treating equilibrium and non-equilibrium solvation energies , 1998 .

[29]  R. Marcus,et al.  Electron transfers in chemistry and biology , 1985 .

[30]  A. Soudackov,et al.  Multistate continuum theory for multiple charge transfer reactions in solution , 1999 .

[31]  R I Cukier,et al.  Proton-coupled electron transfer. , 1998, Annual review of physical chemistry.

[32]  A. Soudackov,et al.  Buffer-assisted proton-coupled electron transfer in a model rhenium-tyrosine complex. , 2007, Journal of the American Chemical Society.

[33]  A. Soudackov,et al.  Derivation of rate expressions for nonadiabatic proton-coupled electron transfer reactions in solution , 2000 .

[34]  D. Truhlar,et al.  Small temperature dependence of the kinetic isotope effect for the hydride transfer reaction catalyzed by Escherichia coli dihydrofolate reductase. , 2005, The journal of physical chemistry. B.

[35]  U. Nagashima,et al.  Tunneling Effect in Antioxidant, Prooxidant, and Regeneration Reactions of Vitamin E† , 2000 .

[36]  W. Cramer,et al.  Energy transduction in biological membranes : a textbook of bioenergetics , 1991 .

[37]  Takeshi Yamamoto,et al.  Ab initio calculation of proton-coupled electron transfer rates using the external-potential representation: a ubiquinol complex in solution. , 2007, The Journal of chemical physics.

[38]  Donald G Truhlar,et al.  Multidimensional tunneling, recrossing, and the transmission coefficient for enzymatic reactions. , 2006, Chemical reviews.

[39]  R. P. Bell,et al.  The tunnel effect in chemistry , 1959 .

[40]  A. Becke Density-functional thermochemistry. III. The role of exact exchange , 1993 .

[41]  M. Frisch,et al.  Ab Initio Calculation of Vibrational Absorption and Circular Dichroism Spectra Using Density Functional Force Fields , 1994 .