Genome-wide analysis of the HSP20 gene family and its response to heat and drought stress in Coix (Coix lacryma-jobi L.)

[1]  F. J. Corpas,et al.  Small Heat Shock Protein (sHSP) Gene Family from Sweet Pepper (Capsicum annuum L.) Fruits: Involvement in Ripening and Modulation by Nitric Oxide (NO) , 2023, Plants.

[2]  Yan Peng,et al.  Adlay, an ancient functional plant with nutritional quality, improves human health , 2022, Frontiers in Nutrition.

[3]  M. Kanehisa,et al.  KEGG for taxonomy-based analysis of pathways and genomes , 2022, Nucleic Acids Res..

[4]  W. Wang,et al.  Phylogenetic and Transcriptional Analyses of the HSP20 Gene Family in Peach Revealed That PpHSP20-32 Is Involved in Plant Height and Heat Tolerance , 2022, International journal of molecular sciences.

[5]  A. Guihur,et al.  Heat Shock Signaling in Land Plants: From Plasma Membrane Sensing to the Transcription of Small Heat Shock Proteins , 2021, Frontiers in Plant Science.

[6]  P. Bork,et al.  eggNOG-mapper v2: Functional Annotation, Orthology Assignments, and Domain Prediction at the Metagenomic Scale , 2021, bioRxiv.

[7]  Yanjun He,et al.  A heat-shock 20 protein isolated from watermelon (ClHSP22.8) negatively regulates the response of Arabidopsis to salt stress via multiple signaling pathways , 2021, PeerJ.

[8]  Margaret H. Frank,et al.  TBtools - an integrative toolkit developed for interactive analyses of big biological data. , 2020, Molecular plant.

[9]  Jing Jiang,et al.  Functional characterization of class I SlHSP17.7 gene responsible for tomato cold-stress tolerance. , 2020, Plant science : an international journal of experimental plant biology.

[10]  E. Vierling,et al.  Plant small heat shock proteins - evolutionary and functional diversity. , 2020, The New phytologist.

[11]  Jun He,et al.  The Coix genome provides insights into Panicoideae evolution and papery hull domestication. , 2019, Molecular plant.

[12]  Yi-He Yu,et al.  Genome-wide identification of small heat-shock protein (HSP20) gene family in grape and expression profile during berry development , 2019, BMC Plant Biology.

[13]  Jie Li,et al.  Genome-wide identification and expression profile analysis of the Hsp20 gene family in Barley (Hordeum vulgare L.) , 2019, PeerJ.

[14]  Sudhir Kumar,et al.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms. , 2018, Molecular biology and evolution.

[15]  Qin Chen,et al.  Genome-wide analysis of the potato Hsp20 gene family: identification, genomic organization and expression profiles in response to heat stress , 2018, BMC Genomics.

[16]  Q. Xie,et al.  The sHSP22 Heat Shock Protein Requires the ABI1 Protein Phosphatase to Modulate Polar Auxin Transport and Downstream Responses1[OPEN] , 2017, Plant Physiology.

[17]  Kevin L. Schneider,et al.  Improved maize reference genome with single-molecule technologies , 2017, Nature.

[18]  B. Bukau,et al.  Role of sHsps in organizing cytosolic protein aggregation and disaggregation , 2017, Cell Stress and Chaperones.

[19]  J. Li,et al.  Identification and characterization of the GhHsp20 gene family in Gossypium hirsutum , 2016, Scientific Reports.

[20]  Jiahong Yu,et al.  Genome-Wide Identification and Expression Profiling of Tomato Hsp20 Gene Family in Response to Biotic and Abiotic Stresses , 2016, Front. Plant Sci..

[21]  Li Liu,et al.  Revealing a 5,000-y-old beer recipe in China , 2016, Proceedings of the National Academy of Sciences.

[22]  E. Vierling,et al.  A first line of stress defense: small heat shock proteins and their function in protein homeostasis. , 2015, Journal of molecular biology.

[23]  A. Nepomuceno,et al.  Genome-wide analysis of the Hsp20 gene family in soybean: comprehensive sequence, genomic organization and expression profile analysis under abiotic and biotic stresses , 2013, BMC Genomics.

[24]  S. Heckathorn,et al.  Analysis of gene sequences indicates that quantity not quality of chloroplast small HSPs improves thermotolerance in C4 and CAM plants , 2012, Plant Cell Reports.

[25]  S. Heckathorn,et al.  Analysis of gene sequences indicates that quantity not quality of chloroplast small HSPs improves thermotolerance in C4 and CAM plants , 2012, Plant Cell Reports.

[26]  Xinbo Chen,et al.  Overexpression of OsHsp17.0 and OsHsp23.7 enhances drought and salt tolerance in rice. , 2012, Journal of plant physiology.

[27]  H. Kong,et al.  Divergence of duplicate genes in exon–intron structure , 2012, Proceedings of the National Academy of Sciences.

[28]  Yeon-Ki Kim,et al.  Rice sHsp genes: genomic organization and expression profiling under stress and development , 2009, BMC Genomics.

[29]  Y. Ouyang,et al.  Comprehensive sequence and expression profile analysis of Hsp20 gene family in rice , 2009, Plant Molecular Biology.

[30]  J. Bähler,et al.  Rapidly regulated genes are intron poor. , 2008, Trends in genetics : TIG.

[31]  Rodrigo Lopez,et al.  Clustal W and Clustal X version 2.0 , 2007, Bioinform..

[32]  Y. Charng,et al.  Arabidopsis Hsa32, a Novel Heat Shock Protein, Is Essential for Acquired Thermotolerance during Long Recovery after Acclimation1[W] , 2006, Plant Physiology.

[33]  Takuji Sasaki,et al.  The map-based sequence of the rice genome , 2005, Nature.

[34]  Steven B Cannon,et al.  The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana , 2004, BMC Plant Biology.

[35]  A. Altman,et al.  Role of plant heat-shock proteins and molecular chaperones in the abiotic stress response. , 2004, Trends in plant science.

[36]  M. Van Montagu,et al.  Small heat shock proteins and stress tolerance in plants. , 2002, Biochimica et biophysica acta.

[37]  E. Vierling,et al.  The expanding family of Arabidopsis thaliana small heat stress proteins and a new family of proteins containing α-crystallin domains (Acd proteins) , 2001, Cell stress & chaperones.

[38]  D. G. Brown,et al.  The origins of genomic duplications in Arabidopsis. , 2000, Science.

[39]  The Arabidopsis Genome Initiative.  Analysis of the genome sequence of the flowering plant Arabidopsis thaliana , 2000, Nature.

[40]  J. Miernyk.  Protein folding in the plant cell. , 1999, Plant physiology.

[41]  M T Clegg,et al.  Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[42]  E. Waters.  The evolution, function, structure, and expression of the plant sHSPs. , 2013, Journal of experimental botany.

[43]  E. Waters,et al.  Comparative analysis of the small heat shock proteins in three angiosperm genomes identifies new subfamilies and reveals diverse evolutionary patterns , 2008, Cell Stress and Chaperones.

[44]  Hilde van der Togt,et al.  Publisher's Note , 2003, J. Netw. Comput. Appl..

[45]  E. Vierling.  The Roles of Heat Shock Proteins in Plants , 1991 .

[46]  Xuehai Zhang,et al.  Genome-Wide Identification and Characterization of Heat Shock Protein 20 Genes in Maize , 2022 .

[47]  Ang Li,et al.  Genome-wide identification, characterization and expression of HSP 20 gene family in dove , 2022, Frontiers in Genetics.