Structure and dynamics of the aliphatic cholesterol side chain in membranes as studied by (2)H NMR spectroscopy and molecular dynamics simulation.
暂无分享,去创建一个
Daniel Huster | Robert Bittman | Alexander Vogel | H. Scheidt | D. Huster | R. Bittman | Alexander Vogel | Holger A Scheidt | Dong Jae Baek | D. Baek
[1] S. Dodd,et al. Area per lipid and acyl length distributions in fluid phosphatidylcholines determined by (2)H NMR spectroscopy. , 2000, Biophysical journal.
[2] D. Huster. Solid-state NMR spectroscopy to study protein-lipid interactions. , 2014, Biochimica et biophysica acta.
[3] G. Lindblom,et al. Effect of sterol structure on the bending rigidity of lipid membranes: A (2)H NMR transverse relaxation study. , 2009, Biochimica et biophysica acta.
[4] M. Bloom,et al. Quadrupolar echo deuteron magnetic resonance spectroscopy in ordered hydrocarbon chains , 1976 .
[5] C. Nordman,et al. Structure and pseudosymmetry of cholesterol at 310 K. , 2002, Acta crystallographica. Section B, Structural science.
[6] Jeffery B. Klauda,et al. Update of the cholesterol force field parameters in CHARMM. , 2012, The journal of physical chemistry. B.
[7] W. Wu,et al. CONFORMATIONAL CHANGE OF CHOLESTEROL SIDE CHAIN IN LIPID BILAYERS , 1991 .
[8] E. Dufourc,et al. Structural and dynamical details of cholesterol-lipid interaction as revealed by deuterium NMR , 1984 .
[9] S. Milles,et al. Organization of fluorescent cholesterol analogs in lipid bilayers - lessons from cyclodextrin extraction. , 2013, Biochimica et biophysica acta.
[10] K. Gawrisch,et al. Critical fluctuations in domain-forming lipid mixtures , 2007, Proceedings of the National Academy of Sciences.
[11] T. Engels,et al. Molecular dynamics simulations of stratum corneum lipid models: fatty acids and cholesterol. , 2001, Biochimica et biophysica acta.
[12] J. Mongan,et al. Accelerated molecular dynamics: a promising and efficient simulation method for biomolecules. , 2004, The Journal of chemical physics.
[13] A. Herrmann,et al. Membrane properties of cholesterol analogs with an unbranched aliphatic side chain. , 2014, Chemistry and physics of lipids.
[14] Robin Taylor,et al. Intermolecular Nonbonded Contact Distances in Organic Crystal Structures: Comparison with Distances Expected from van der Waals Radii , 1996 .
[15] E. Oldfield,et al. Spectroscopic studies of specifically deuterium labeled membrane systems. Nuclear magnetic resonance investigation of the effects of cholesterol in model systems. , 1978, Biochemistry.
[16] James H. Davis,et al. The description of membrane lipid conformation, order and dynamics by 2H-NMR. , 1983, Biochimica et biophysica acta.
[17] R. Bittman,et al. Synthesis of cholesterol analogs having varying length alkyl side chains including cholesterol-23, 23, 24, 24, 25, 26, 26, 26, 27, 27, 27-d(11) as probes of cholesterol's functions and properties. , 2013, Chemistry and physics of lipids.
[18] H. Shieh,et al. The structure of cholesterol , 1981 .
[19] H. Scheidt,et al. The G-protein-coupled neuropeptide Y receptor type 2 is highly dynamic in lipid membranes as revealed by solid-state NMR spectroscopy. , 2014, Chemistry.
[20] W. Im,et al. Automated Builder and Database of Protein/Membrane Complexes for Molecular Dynamics Simulations , 2007, PloS one.
[21] Volker Dötsch,et al. Modified lipid and protein dynamics in nanodiscs. , 2013, Biochimica et biophysica acta.
[22] H. Berendsen,et al. ALGORITHMS FOR MACROMOLECULAR DYNAMICS AND CONSTRAINT DYNAMICS , 1977 .
[23] E. Ikonen,et al. How cells handle cholesterol. , 2000, Science.
[24] M. Zuckermann,et al. What's so special about cholesterol? , 2004, Lipids.
[25] H. Scheidt,et al. The dynamics of the G protein-coupled neuropeptide Y2 receptor in monounsaturated membranes investigated by solid-state NMR spectroscopy , 2015, Journal of biomolecular NMR.
[26] M. F. Brown,et al. Curvature forces in membrane lipid-protein interactions. , 2012, Biochemistry.
[27] Laxmikant V. Kalé,et al. Scalable molecular dynamics with NAMD , 2005, J. Comput. Chem..
[28] A. Herrmann,et al. Desmosterol may replace cholesterol in lipid membranes. , 2005, Biophysical journal.
[29] Alexander D. MacKerell,et al. CHARMM all-atom additive force field for sphingomyelin: elucidation of hydrogen bonding and of positive curvature. , 2014, Biophysical journal.
[30] T. Darden,et al. A smooth particle mesh Ewald method , 1995 .
[31] A. Herrmann,et al. Cholesterol's aliphatic side chain modulates membrane properties. , 2013, Angewandte Chemie.
[32] H. Waldmann,et al. Backbone conformational flexibility of the lipid modified membrane anchor of the human N-Ras protein investigated by solid-state NMR and molecular dynamics simulation. , 2010, Biochimica et biophysica acta.
[33] Richard G. W. Anderson,et al. Lipid rafts: at a crossroad between cell biology and physics , 2007, Nature Cell Biology.
[34] I. Smith,et al. Direct observation of the properties of cholesterol in membranes by deuterium NMR. , 1982, Chemistry and physics of lipids.
[35] R. Mendelsohn,et al. Effects of cholesterol on conformational disorder in dipalmitoylphosphatidylcholine bilayers. A quantitative IR study of the depth dependence. , 1990, Biochemistry.
[36] A. Pokorny,et al. Thermodynamics of membrane domains. , 2005, Biochimica et biophysica acta.
[37] A. Pokorny,et al. Investigation of Domain Formation in Sphingomyelin/Cholesterol/POPC Mixtures by Fluorescence Resonance Energy Transfer and Monte Carlo Simulations , 2007, Biophysical journal.
[38] A. Leftin,et al. An NMR database for simulations of membrane dynamics. , 2011, Biochimica et biophysica acta.
[39] I. Vattulainen,et al. What happens if cholesterol is made smoother: importance of methyl substituents in cholesterol ring structure on phosphatidylcholine-sterol interaction. , 2007, Biophysical journal.
[40] A. Herrmann,et al. Characterization of the ternary mixture of sphingomyelin, POPC, and cholesterol: support for an inhomogeneous lipid distribution at high temperatures. , 2008, Biophysical journal.
[41] I. V. Polozov,et al. Novel NMR tools to study structure and dynamics of biomembranes. , 2002, Chemistry and physics of lipids.
[42] Influence of the sterol aliphatic side chain on membrane properties: a molecular dynamics study. , 2015, Physical chemistry chemical physics : PCCP.
[43] S. Feller,et al. The orientation and dynamics of estradiol and estradiol oleate in lipid membranes and HDL disc models. , 2014, Biophysical journal.
[44] R. Young,et al. Tracking the structural changes in a series of cholesterol solvates , 2012 .
[45] Alexander D. MacKerell,et al. Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types. , 2010, The journal of physical chemistry. B.
[46] M. Takagi,et al. Physical properties of the hybrid lipid POPC on micrometer-sized domains in mixed lipid membranes. , 2015, Physical chemistry chemical physics : PCCP.
[47] Trivikram R. Molugu,et al. Area per lipid and cholesterol interactions in membranes from separated local-field (13)C NMR spectroscopy. , 2014, Biophysical journal.
[48] V. Pande,et al. Multiplexed-replica exchange molecular dynamics method for protein folding simulation. , 2003, Biophysical journal.
[49] D. Brown,et al. Functions of lipid rafts in biological membranes. , 1998, Annual review of cell and developmental biology.
[50] G. Meer,et al. Membrane lipids: where they are and how they behave , 2008, Nature Reviews Molecular Cell Biology.
[51] J. Seelig. Deuterium magnetic resonance: theory and application to lipid membranes , 1977, Quarterly Reviews of Biophysics.
[52] A. Herrmann,et al. The Potential of Fluorescent and Spin-labeled Steroid Analogs to Mimic Natural Cholesterol* , 2003, Journal of Biological Chemistry.
[53] Tiago M. Ferreira,et al. Cholesterol and POPC segmental order parameters in lipid membranes: solid state 1H-13C NMR and MD simulation studies. , 2013, Physical chemistry chemical physics : PCCP.
[54] D. Huster,et al. Influence of docosahexaenoic acid and cholesterol on lateral lipid organization in phospholipid mixtures. , 1998, Biochemistry.
[55] Michael F. Brown,et al. Raftlike mixtures of sphingomyelin and cholesterol investigated by solid-state 2H NMR spectroscopy. , 2008, Journal of the American Chemical Society.