Spatial multinomial regression models for nominal categorical data: a study of land cover in Northern Wisconsin, USA

We develop statistical tools for regression analysis of nominal categorical data on a spatial lattice that are becoming increasingly abundant because of the advances of geographic information systems in environmental science. In a generalized linear mixed model framework, we model the response variable by a multinomial distribution. There are two additive components in the linear predictor: a linear regression on covariates and a spatial random effect such that the spatial dependence in the random effect is induced by a multivariate conditional autoregressive model. Bayesian hierarchical modeling is used for statistical inference, and Markov chain Monte Carlo algorithms are devised to obtain posterior samples. The methodology is applied to analyze a northern Wisconsin land cover data set in a study that assesses the relationship between forest landscape structure and past social conditions, expanding the analytical tools available in landscape ecology and environmental history. Copyright © 2013 John Wiley & Sons, Ltd.

[1]  Jun Zhu,et al.  Influence of biophysical factors and differences in Ojibwe reservation versus Euro-American social histories on forest landscape change in northern Wisconsin, USA , 2011, Landscape Ecology.

[2]  Jennifer A. Hoeting,et al.  A clipped latent variable model for spatially correlated ordered categorical data , 2010, Comput. Stat. Data Anal..

[3]  C. Paciorek,et al.  Mapping Ancient Forests: Bayesian Inference for Spatio-Temporal Trends in Forest Composition Using the Fossil Pollen Proxy Record , 2009, Journal of the American Statistical Association.

[4]  B. Hubbard American Boundaries: The Nation, the States, the Rectangular Survey , 2009 .

[5]  Jun Zhu,et al.  Markov chain Monte Carlo for a Spatial-Temporal Autologistic Regression Model , 2008 .

[6]  L Sun,et al.  Bayesian analysis of crossclassified spatial data with autocorrelation. , 2008, Biometrics.

[7]  B. Turner,et al.  New England's Forest Landscape: Ecological Legacies and Conservation Patterns Shaped by Agrarian History , 2008 .

[8]  Noel A Cressie,et al.  A spatial model for multivariate lattice data , 2007 .

[9]  M. Clayton,et al.  Regional land-cover conversion in the U.S. upper Midwest: magnitude of change and limited recovery (1850–1935–1993) , 2007, Landscape Ecology.

[10]  M. Steen-Adams,et al.  White Pine in the Northern Forests: An Ecological and Management History of White Pine on the Bad River Reservation of Wisconsin , 2007, Environmental History.

[11]  Rbsumb Utilisatiolt LAND USE AND LANDSCAPE CHANGE IN THE COLORADO MOUNTAINS II : A CASE STUDY OF THE EAST RIVER VALLEY , 2007 .

[12]  T. Spies,et al.  Cumulative ecological and socioeconomic effects of forest policies in coastal Oregon. , 2007, Ecological applications : a publication of the Ecological Society of America.

[13]  D. Nychka,et al.  A multivariate spatial model for soil water profiles , 2006 .

[14]  H. Delcourt,et al.  Presettlement landscape heterogeneity: Evaluating grain of resolution using General Land Office Survey data , 1996, Landscape Ecology.

[15]  J. E. Byers,et al.  LANDSCAPE ECOLOGY : What Is the State of the Science ? , 2006 .

[16]  Bradley P Carlin,et al.  Generalized Hierarchical Multivariate CAR Models for Areal Data , 2005, Biometrics.

[17]  M. Turner Landscape ecology: what is the state of the science? , 2005 .

[18]  J. Zhu,et al.  Generalized Linear Latent Variable Models for Repeated Measures of Spatially Correlated Multivariate Data , 2005, Biometrics.

[19]  Jun Zhu,et al.  Modeling spatial-temporal binary data using Markov random fields , 2005 .

[20]  Monica G. Turner,et al.  EFFECTS OF PAST LAND USE ON SPATIAL HETEROGENEITY OF SOIL NUTRIENTS IN SOUTHERN APPALACHIAN FORESTS , 2005 .

[21]  David J. Mladenoff,et al.  SEVERE WIND AND FIRE REGIMES IN NORTHERN FORESTS: HISTORICAL VARIABILITY AT THE REGIONAL SCALE , 2005 .

[22]  Daniel G. Brown,et al.  Land use and forest cover on private parcels in the Upper Midwest USA, 1970 to 1990 , 2003, Landscape Ecology.

[23]  Thomas A. Spies,et al.  Land ownership and landscape structure: a spatial analysis of sixty-six Oregon (USA) Coast Range watersheds , 2002, Landscape Ecology.

[24]  Mark A. White,et al.  Old-growth forest landscape transitions from pre-European settlement to present , 1994, Landscape Ecology.

[25]  T. Crow,et al.  Ownership and ecosystem as sources of spatial heterogeneity in a forested landscape, Wisconsin, USA , 2004, Landscape Ecology.

[26]  Melanie M Wall,et al.  Generalized common spatial factor model. , 2003, Biostatistics.

[27]  L. Heasley,et al.  Shifting Boundaries on a Wisconsin Landscape: Can GIS Help Historians Tell a Complicated Story? , 2003 .

[28]  K. Medley,et al.  Historical Changes in Forest Cover and Land Ownership in a Midwestern U.S. Landscape , 2003 .

[29]  Jun Zhu,et al.  Modeling Spatial Temporal Binary Data Using Markov Random Fields , 2003 .

[30]  E. Dambrine,et al.  Irreversible impact of past land use on forest soils and biodiversity , 2002 .

[31]  Bradley P. Carlin,et al.  Bayesian measures of model complexity and fit , 2002 .

[32]  Eric R. Ziegel,et al.  Generalized Linear Models , 2002, Technometrics.

[33]  L. Schulte,et al.  The Original US Public Land Survey Records: Their Use and Limitations in Reconstructing Presettlement Vegetation , 2001 .

[34]  V. D. Oliveira,et al.  Bayesian prediction of clipped Gaussian random fields , 2000 .

[35]  Julio L. Betancourt,et al.  APPLIED HISTORICAL ECOLOGY: USING THE PAST TO MANAGE FOR THE FUTURE , 1999 .

[36]  Robert G. Bailey,et al.  The following is an electronic version of National Hierarchical Framework of Ecological Units , 1999 .

[37]  P. Diggle,et al.  Model-based geostatistics (with discussion). , 1998 .

[38]  T. C. Haas,et al.  Model-based geostatistics. Discussion. Authors' reply , 1998 .

[39]  T. C. Haas,et al.  Model-based geostatistics - Discussion , 1998 .

[40]  Noel A. C. Cressie,et al.  Statistics for Spatial Data: Cressie/Statistics , 1993 .

[41]  D. Foster,et al.  Post-settlement history of human land-use and vegetation dynamics of a Tsuga canadensis (hemlock) woodlot in central New England. , 1992 .

[42]  K. Mardia Multi-dimensional multivariate Gaussian Markov random fields with application to image processing , 1988 .

[43]  John Aitchison,et al.  The Statistical Analysis of Compositional Data , 1986 .

[44]  J. Besag Spatial Interaction and the Statistical Analysis of Lattice Systems , 1974 .