Daylight exposure modulates bacterial communities associated with household dust

[1]  Rob Knight,et al.  American Gut: an Open Platform for Citizen Science Microbiome Research , 2018, mSystems.

[2]  Rick L. Stevens,et al.  A communal catalogue reveals Earth’s multiscale microbial diversity , 2017, Nature.

[3]  Charis M. Thompson.  Collect reliable data on embryo selection , 2017, Nature.

[4]  A. Pruden,et al.  Interactive effects of temperature, organic carbon, and pipe material on microbiota composition and Legionella pneumophila in hot water plumbing systems , 2017, Microbiome.

[5]  William W. Nazaroff,et al.  Microbes and associated soluble and volatile chemicals on periodically wet household surfaces , 2017, Microbiome.

[6]  Susan P. Holmes,et al.  Multidomain analyses of a longitudinal human microbiome intestinal cleanout perturbation experiment , 2017, PLoS Comput. Biol..

[7]  David K. Karig,et al.  Sampling, sequencing and the SAD , 2017 .

[8]  Karen C. Dannemiller,et al.  Fungal and bacterial growth in floor dust at elevated relative humidity levels , 2017, Indoor air.

[9]  Rob Knight,et al.  Uncovering the Horseshoe Effect in Microbial Analyses , 2017, mSystems.

[10]  S. Holmes,et al.  Bioconductor Workflow for Microbiome Data Analysis: from raw reads to community analyses , 2016, F1000Research.

[11]  Paul J. McMurdie,et al.  DADA2: High resolution sample inference from Illumina amplicon data , 2016, Nature Methods.

[12]  John H. Chase,et al.  Geography and Location Are the Primary Drivers of Office Microbiome Composition , 2016, mSystems.

[13]  Sean M. Gibbons,et al.  The Built Environment Is a Microbial Wasteland , 2016, mSystems.

[14]  N. Fierer,et al.  Relic DNA is abundant in soil and obscures estimates of soil microbial diversity , 2016, Nature Microbiology.

[15]  J. Kline,et al.  Making microbiology of the built environment relevant to design , 2016, Microbiome.

[16]  Atila Novoselac,et al.  Walls talk: Microbial biogeography of homes spanning urbanization , 2016, Science Advances.

[17]  Yunqiu Jiang,et al.  Does IL-17 Respond to the Disordered Lung Microbiome and Contribute to the Neutrophilic Phenotype in Asthma? , 2016, Mediators of inflammation.

[18]  William A. Walters,et al.  Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys , 2015, mSystems.

[19]  Alexander J. Probst,et al.  Microbiomes of the dust particles collected from the International Space Station and Spacecraft Assembly Facilities , 2015, Microbiome.

[20]  H. Bik,et al.  Microbiota of the indoor environment: a meta-analysis , 2015, Microbiome.

[21]  Jason Stenson,et al.  Humans differ in their personal microbial cloud , 2015, PeerJ.

[22]  Ethan P. White,et al.  An extensive comparison of species-abundance distribution models , 2015, bioRxiv.

[23]  Tiina Reponen,et al.  Key determinants of the fungal and bacterial microbiomes in homes. , 2015, Environmental research.

[24]  M. Lynch,et al.  Ecology and exploration of the rare biosphere , 2015, Nature Reviews Microbiology.

[25]  K. Peay,et al.  Parsing ecological signal from noise in next generation amplicon sequencing. , 2015, The New phytologist.

[26]  Y. Rudich,et al.  Combining real-time PCR and next-generation DNA sequencing to provide quantitative comparisons of fungal aerosol populations , 2014 .

[27]  Jeff Kline,et al.  Architectural Design Drives the Biogeography of Indoor Bacterial Communities , 2014, PloS one.

[28]  G. Rook.  Regulation of the immune system by biodiversity from the natural environment: An ecosystem service essential to health , 2013, Proceedings of the National Academy of Sciences.

[29]  R. Hobday,et al.  Roles of sunlight and natural ventilation for controlling infection: historical and current perspectives , 2013, Journal of Hospital Infection.

[30]  Bong-Soo Kim,et al.  Identification of Household Bacterial Community and Analysis of Species Shared with Human Microbiome , 2013, Current Microbiology.

[31]  James F. Meadow,et al.  Indoor airborne bacterial communities are influenced by ventilation, occupancy, and outdoor air source , 2013, Indoor air.

[32]  Rob Knight,et al.  Diversity, distribution and sources of bacteria in residential kitchens. , 2013, Environmental microbiology.

[33]  James P. O'Dwyer,et al.  Phylogenetic Diversity Theory Sheds Light on the Structure of Microbial Communities , 2012, PLoS Comput. Biol..

[34]  Pelin Yilmaz,et al.  The SILVA ribosomal RNA gene database project: improved data processing and web-based tools , 2012, Nucleic Acids Res..

[35]  Manuel J. Gómez,et al.  Exploring Bacterial Diversity in Hospital Environments by GS-FLX Titanium Pyrosequencing , 2012, PloS one.

[36]  William W. Nazaroff,et al.  Human Occupancy as a Source of Indoor Airborne Bacteria , 2012, PloS one.

[37]  Jeff Kline,et al.  Architectural design influences the diversity and structure of the built environment microbiome , 2012, The ISME Journal.

[38]  Rob Knight,et al.  Bayesian community-wide culture-independent microbial source tracking , 2011, Nature Methods.

[39]  R. Knight,et al.  Microbial community resemblance methods differ in their ability to detect biologically relevant patterns , 2010, Nature Methods.

[40]  Paramvir S. Dehal,et al.  FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments , 2010, PloS one.

[41]  Lin Jiang,et al.  Community assembly in the presence of disturbance: a microcosm experiment. , 2008, Ecology.

[42]  Andrea R. Ferro,et al.  Estimating the Resuspension Rate and Residence Time of Indoor Particles , 2008, Journal of the Air & Waste Management Association.

[43]  T. Benton,et al.  Microcosm experiments can inform global ecological problems. , 2007, Trends in ecology & evolution.

[44]  J. Blanco,et al.  Solar photocatalytic disinfection of agricultural pathogenic fungi: Fusarium species , 2007 .

[45]  Anne K Camper,et al.  Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells. , 2006, Journal of microbiological methods.

[46]  S. Srivannaboon,et al.  Photoprotection by window glass, automobile glass, and sunglasses. , 2006, Journal of the American Academy of Dermatology.

[47]  Marti J. Anderson,et al.  Distance‐Based Tests for Homogeneity of Multivariate Dispersions , 2006, Biometrics.

[48]  S. Takashiba,et al.  Quantitative real-time PCR using TaqMan and SYBR Green for Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis, Prevotella intermedia, tetQ gene and total bacteria. , 2003, FEMS immunology and medical microbiology.

[49]  Jonathan M. Chase.  Community assembly: when should history matter? , 2003, Oecologia.

[50]  János Podani,et al.  RESEMBLANCE COEFFICIENTS AND THE HORSESHOE EFFECT IN PRINCIPAL COORDINATES ANALYSIS , 2002 .

[51]  W. H. Engelmann,et al.  The National Human Activity Pattern Survey (NHAPS): a resource for assessing exposure to environmental pollutants , 2001, Journal of Exposure Analysis and Environmental Epidemiology.

[52]  P. Hockberger.  The discovery of the damaging effect of sunlight on bacteria. , 2000, Journal of photochemistry and photobiology. B, Biology.

[53]  W. Beckett.  Occupational respiratory diseases. , 2000, The New England journal of medicine.

[54]  R. Hobday.  Sunlight therapy and solar architecture. , 1997, Medical History.

[55]  G. Huxel,et al.  Microcosms as models for generating and testing community theory , 1996 .

[56]  N. Gotelli,et al.  NULL MODELS IN ECOLOGY , 1996 .

[57]  T. Husman,et al.  Health effects of indoor-air microorganisms. , 1996, Scandinavian journal of work, environment & health.

[58]  M. Pommepuy,et al.  Visible light damage to Escherichia coli in seawater: oxidative stress hypothesis. , 1994, The Journal of applied bacteriology.

[59]  R. Burnett,et al.  Adverse health effects among adults exposed to home dampness and molds. , 1991, The American review of respiratory disease.

[60]  Paul H. Harvey,et al.  NULL MODELS IN ECOLOGY , 1983 .

[61]  P. Hanawalt,et al.  EVIDENCE FOR REPAIR-REPLICATION OF ULTRAVIOLET DAMAGED DNA IN BACTERIA. , 1964, Journal of molecular biology.

[62]  O. Lidwell,et al.  The survival of bacteria in dust. III. The effect of light on the survival of bacteria in dust , 1950, Journal of Hygiene.

[63]  O M Lidwell,et al.  The survival of bacterial in dust. IV. Atmospheric humidity and the bactericidal action of ultra-violet irradiation , 1950, Journal of Hygiene.

[64]  J. Broadhurst,et al.  Bacterial Destruction through Glass , 1930 .

[65]  Division on Earth,et al.  Microbiomes of the Built Environment: A Research Agenda for Indoor Microbiology, Human Health, and Buildings , 2017 .

[66]  T. Reponen,et al.  An emerging paradox: Toward a better understanding of the potential benefits and adversity of microbe exposures in the indoor environment. , 2017, Indoor air.

[67]  Laurens van der Maaten,et al.  Accelerating t-SNE using tree-based algorithms , 2014, J. Mach. Learn. Res..

[68]  R Core Team,et al.  R: A language and environment for statistical computing. , 2014 .

[69]  B. S. Sandhu,et al.  Relationship of sunlight and humidity on the virulence of street rabies virus in saliva. , 2009 .

[70]  Geoffrey E. Hinton,et al.  Visualizing Data using t-SNE , 2008 .

[71]  W. Hijnen,et al.  Inactivation credit of UV radiation for viruses, bacteria and protozoan (oo)cysts in water: a review. , 2006, Water research.

[72]  Y. Benjamini,et al.  Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .

[73]  L. Tranvik,et al.  Enhanced bacterial growth in response to photochemical transformation of dissolved organic matter , 1995 .

[74]  O. Larkö,et al.  The effect of UV-light on human skin microorganisms. , 1987, Acta dermato-venereologica.

[75]  H. M. Ward.  The Action of Light on Bacteria. III , 1894 .

[76]  H. M. Ward.  The Action of Light on Bacteria. III. [Abstract] , 1893 .

[77]  A. W. Downing,et al.  III. Researches on the effect of light upon Bacteria and other organisms , 1878, Proceedings of the Royal Society of London.