Pandoraviruses are highly derived phycodnaviruses

[1]  Eugene V. Koonin,et al.  Virus World as an Evolutionary Network of Viruses and Capsidless Selfish Elements , 2014, Microbiology and Molecular Reviews.

[2]  J. Filée,et al.  Route of NCLDV evolution: the genomic accordion. , 2013, Current opinion in virology.

[3]  M. Krupovic Networks of evolutionary interactions underlying the polyphyletic origin of ssDNA viruses. , 2013, Current opinion in virology.

[4]  Jean-Michel Claverie,et al.  Pandoraviruses: Amoeba Viruses with Genomes Up to 2.5 Mb Reaching That of Parasitic Eukaryotes , 2013, Science.

[5]  E. Koonin,et al.  A virocentric perspective on the evolution of life , 2013, Current Opinion in Virology.

[6]  E. Koonin,et al.  “Megavirales”, a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses , 2013, Archives of Virology.

[7]  E. Koonin,et al.  Mimiviridae: clusters of orthologous genes, reconstruction of gene repertoire evolution and proposed expansion of the giant virus family , 2013, Virology Journal.

[8]  E. Koonin,et al.  Hidden evolutionary complexity of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes , 2012, Virology Journal.

[9]  D. Raoult,et al.  Reclassification of Giant Viruses Composing a Fourth Domain of Life in the New Order Megavirales , 2012, Intervirology.

[10]  M. Krupovic,et al.  Double-stranded DNA viruses: 20 families and only five different architectural principles for virion assembly. , 2011, Current opinion in virology.

[11]  Ramón Doallo,et al.  ProtTest 3: fast selection of best-fit models of protein evolution , 2011, Bioinform..

[12]  Ramón Doallo,et al.  ProtTest-HPC: Fast Selection of Best-Fit Models of Protein Evolution , 2010, Euro-Par Workshops.

[13]  Patrick Forterre,et al.  Giant Viruses: Conflicts in Revisiting the Virus Concept , 2010, Intervirology.

[14]  E. Koonin,et al.  Origin and Evolution of Eukaryotic Large Nucleo-Cytoplasmic DNA Viruses , 2010, Intervirology.

[15]  Paramvir S. Dehal,et al.  FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments , 2010, PloS one.

[16]  Natalya Yutin,et al.  Eukaryotic large nucleo-cytoplasmic DNA viruses: Clusters of orthologous genes and reconstruction of viral genome evolution , 2009, Virology Journal.

[17]  E. Koonin,et al.  The complexity of the virus world , 2009, Nature Reviews Microbiology.

[18]  M. Krupovic,et al.  Does the evolution of viral polymerases reflect the origin and evolution of viruses? , 2009, Nature Reviews Microbiology.

[19]  M. Krupovic,et al.  Virus evolution: how far does the double β-barrel viral lineage extend? , 2008, Nature Reviews Microbiology.

[20]  E. Koonin,et al.  The Deep Archaeal Roots of Eukaryotes , 2008, Molecular biology and evolution.

[21]  P. Forterre,et al.  Redefining viruses: lessons from Mimivirus , 2008, Nature Reviews Microbiology.

[22]  W. Martin,et al.  The tree of one percent , 2006, Genome Biology.

[23]  E. Koonin,et al.  The ancient Virus World and evolution of cells , 2006, Biology Direct.

[24]  Julian Parkhill,et al.  Complete Genome Sequence and Lytic Phase Transcription Profile of a Coccolithovirus , 2005, Science.

[25]  Jean-Michel Claverie,et al.  Mimivirus and the emerging concept of "giant" virus. , 2005, Virus research.

[26]  J. Claverie,et al.  The 1.2-Megabase Genome Sequence of Mimivirus , 2004, Science.

[27]  K. Strimmer,et al.  TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics , 2004, BMC Evolutionary Biology.

[28]  Robert C. Edgar,et al.  MUSCLE: multiple sequence alignment with high accuracy and high throughput. , 2004, Nucleic acids research.

[29]  Hidetoshi Shimodaira An approximately unbiased test of phylogenetic tree selection. , 2002, Systematic biology.

[30]  E. Koonin,et al.  Common Origin of Four Diverse Families of Large Eukaryotic DNA Viruses , 2001, Journal of Virology.

[31]  Thomas L. Madden,et al.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.

[32]  M J Allen,et al.  The Phycodnaviridae: the story of how tiny giants rule the world. , 2009, Current topics in microbiology and immunology.