Misfolded human tRNA isodecoder binds and neutralizes a 3′ UTR-embedded Alu element
暂无分享,去创建一个
Caroline Paulus | A. Lescure | J. Rudinger-Thirion | M. Frugier | Alain Lescure | Joëlle Rudinger-Thirion | Magali Frugier | C. Paulus
[1] R. Britten. Almost all human genes resulted from ancient duplication , 2006, Proceedings of the National Academy of Sciences.
[2] T. Marr,et al. Computational analysis of 3'-ends of ESTs shows four classes of alternative polyadenylation in human, mouse, and rat. , 2005, Genome research.
[3] W. Richards,et al. Assaying the polyadenylation state of mRNAs. , 1999, Methods.
[4] Dimitri A Kramerov,et al. Short retroposons in eukaryotic genomes. , 2005, International review of cytology.
[5] B. Lorber,et al. Plasmodial Aspartyl-tRNA Synthetases and Peculiarities in Plasmodium falciparum* , 2009, The Journal of Biological Chemistry.
[6] M. Grunberg‐Manago,et al. Bacterial Aminoacyl-tRNA Synthetases: Genes and Regulation of Expression† , 1995 .
[7] S. Vagner,et al. Molecular mechanisms of eukaryotic pre-mRNA 3′ end processing regulation , 2009, Nucleic acids research.
[8] R. Giegé,et al. Ribozyme processed tRNA transcripts with unfriendly internal promoter for T7 RNA polymerase: production and activity , 1998, FEBS letters.
[9] R. Giegé,et al. Yeast aspartyl-tRNA synthetase binds specifically its own mRNA. , 2003, Journal of molecular biology.
[10] J. Manley,et al. Mechanism and regulation of mRNA polyadenylation. , 1997, Genes & development.
[11] J. Landry,et al. Repetitive elements in the 5' untranslated region of a human zinc-finger gene modulate transcription and translation efficiency. , 2001, Genomics.
[12] Y. Chung,et al. Implication of leucyl-tRNA synthetase 1 (LARS1) over-expression in growth and migration of lung cancer cells detected by siRNA targeted knock-down analysis , 2008, Experimental & Molecular Medicine.
[13] G. Wong,et al. The 3' UTR of human MnSOD mRNA hybridizes to a small cytoplasmic RNA and inhibits gene expression. , 2000, Biochemical and biophysical research communications.
[14] Dan Graur,et al. Alu-containing exons are alternatively spliced. , 2002, Genome research.
[15] P. Schimmel,et al. A fragment of human TrpRS as a potent antagonist of ocular angiogenesis , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[16] Michael McClelland,et al. Messenger RNAs under Differential Translational Control in Ki-ras–Transformed Cells , 2006, Molecular Cancer Research.
[17] T. Samuelsson,et al. Useful ‘junk’: Alu RNAs in the human transcriptome , 2007, Cellular and Molecular Life Sciences.
[18] Sunghoon Kim,et al. LysRS serves as a key signaling molecule in the immune response by regulating gene expression. , 2009, Molecular cell.
[19] N. Glaichenhaus,et al. Coordinated posttranscriptional control of gene expression by modular elements including Alu-like repetitive sequences. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[20] N. Tomilin. Control of genes by mammalian retroposons. , 1999, International review of cytology.
[21] Sunghoon Kim,et al. MSC p43 required for axonal development in motor neurons , 2009, Proceedings of the National Academy of Sciences of the United States of America.
[22] G. Carmichael,et al. Alu element‐mediated gene silencing , 2008, The EMBO journal.
[23] L. Maquat,et al. lncRNAs transactivate Staufen1-mediated mRNA decay by duplexing with 3'UTRs via Alu elements , 2010, Nature.
[24] Sunghoon Kim,et al. Multidirectional tumor-suppressive activity of AIMP2/p38 and the enhanced susceptibility of AIMP2 heterozygous mice to carcinogenesis. , 2009, Carcinogenesis.
[25] R. Giegé,et al. tRNAs and tRNA mimics as cornerstones of aminoacyl-tRNA synthetase regulations. , 2005, Biochimie.
[26] J. Häsler,et al. Alu elements as regulators of gene expression , 2006, Nucleic acids research.
[27] Jürgen Brosius,et al. Genomes were forged by massive bombardments with retroelements and retrosequences , 2004, Genetica.
[28] M. Batzer,et al. Alu repeats and human genomic diversity , 2002, Nature Reviews Genetics.
[29] A. Willis,et al. The implications of structured 5' untranslated regions on translation and disease. , 2005, Seminars in cell & developmental biology.
[30] K. Sobczak,et al. Structural Determinants of BRCA1 Translational Regulation* , 2002, The Journal of Biological Chemistry.
[31] E Westhof,et al. The 5S rRNA loop E: chemical probing and phylogenetic data versus crystal structure. , 1998, RNA.
[32] J. Goodrich,et al. B2 RNA and Alu RNA repress transcription by disrupting contacts between RNA polymerase II and promoter DNA within assembled complexes , 2009, Proceedings of the National Academy of Sciences.
[33] R. Mukhopadhyay,et al. The GAIT system: a gatekeeper of inflammatory gene expression. , 2009, Trends in biochemical sciences.
[34] C. Florentz,et al. Identity elements for specific aminoacylation of yeast tRNA(Asp) by cognate aspartyl-tRNA synthetase , 1991, Science.
[35] E. Choi,et al. Glutamine-dependent Antiapoptotic Interaction of Human Glutaminyl-tRNA Synthetase with Apoptosis Signal-regulating Kinase 1* , 2001, The Journal of Biological Chemistry.
[36] J. Foell,et al. Caveolin-3 associates with and affects the function of hyperpolarization-activated cyclic nucleotide-gated channel 4. , 2008, Biochemistry.
[37] S. Kimmel. Architecture , 2013, Arsham-isms.
[38] R. Giegé,et al. Yeast tRNAAsp Charging Accuracy Is Threatened by the N-terminal Extension of Aspartyl-tRNA Synthetase* , 2003, The Journal of Biological Chemistry.
[39] C. Florentz,et al. Decreased aminoacylation in pathology-related mutants of mitochondrial tRNATyr is associated with structural perturbations in tRNA architecture. , 2008, RNA.
[40] C. Ehresmann,et al. Cooperative and specific binding of Vif to the 5' region of HIV-1 genomic RNA. , 2005, Journal of molecular biology.
[41] Oliver Hofmann,et al. ASTD: The Alternative Splicing and Transcript Diversity database. , 2009, Genomics.
[42] P. Schimmel,et al. Highly Differentiated Motifs Responsible for Two Cytokine Activities of a Split Human tRNA Synthetase* , 1999, The Journal of Biological Chemistry.
[43] Anna M. Krichevsky,et al. Translational Control of Specific Genes during Differentiation of HL-60 Cells* , 1999, The Journal of Biological Chemistry.
[44] Eric T. Wang,et al. Alternative Isoform Regulation in Human Tissue Transcriptomes , 2008, Nature.
[45] R Giegé,et al. Universal rules and idiosyncratic features in tRNA identity. , 1998, Nucleic acids research.
[46] Richard Giegé,et al. tRNA‐balanced expression of a eukaryal aminoacyl‐tRNA synthetase by an mRNA‐mediated pathway , 2005, EMBO reports.
[47] Tao Pan,et al. Tissue-Specific Differences in Human Transfer RNA Expression , 2006, PLoS genetics.
[48] R. Giegé,et al. A domain in the N‐terminal extension of class IIb eukaryotic aminoacyl‐tRNA synthetases is important for tRNA binding , 2000, The EMBO journal.
[49] C. Lewis,et al. Hypoxia Regulates Macrophage Functions in Inflammation1 , 2005, The Journal of Immunology.
[50] Melissa J. Moore,et al. Pre-mRNA Processing Reaches Back toTranscription and Ahead to Translation , 2009, Cell.
[51] Hyeong Jun An,et al. The association of Alu repeats with the generation of potential AU-rich elements (ARE) at 3' untranslated regions. , 2004, BMC Genomics.
[52] C. Lutz,et al. Alternative polyadenylation: a twist on mRNA 3' end formation. , 2008, ACS chemical biology.
[53] K. Fischbeck,et al. Glycyl tRNA synthetase mutations in Charcot-Marie-Tooth disease type 2D and distal spinal muscular atrophy type V. , 2003, American journal of human genetics.
[54] D. Levanon,et al. Structure and regulated expression of mammalian RUNX genes , 2004, Oncogene.
[55] A. Krol,et al. Ex vivo correction of selenoprotein N deficiency in rigid spine muscular dystrophy caused by a mutation in the selenocysteine codon , 2007, Nucleic acids research.
[56] Sunghoon Kim,et al. Dose-dependent Biphasic Activity of tRNA Synthetase-associating Factor, p43, in Angiogenesis* , 2002, The Journal of Biological Chemistry.
[57] Bin Tian,et al. A large-scale analysis of mRNA polyadenylation of human and mouse genes , 2005, Nucleic acids research.
[58] E. Levine,et al. Small RNA biology is systems biology. , 2011, BMB reports.
[59] S. Schwartz,et al. Higher processing rates of Alu-containing sequences in kidney tumors and cell lines with overexpressed Alu-mRNAs. , 2003, Oncology reports.
[60] C. Lewis,et al. Macrophage responses to hypoxia: implications for tumor progression and anti-cancer therapies. , 2005, The American journal of pathology.
[61] P. Deininger,et al. Human retroelements may introduce intragenic polyadenylation signals , 2005, Cytogenetic and Genome Research.
[62] Miguel A Andrade-Navarro,et al. Identification of gene 3′ ends by automated EST cluster analysis , 2008, Proceedings of the National Academy of Sciences.
[63] Celso A. Espinoza,et al. Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock. , 2008, Molecular cell.
[64] T. Pan,et al. Diversity of tRNA genes in eukaryotes , 2006, Nucleic acids research.