An orthogonal wavelet denoising algorithm for surface images of atomic force microscopy

This paper deals with the noise reduction of discrete AFM surface images using orthogonal wavelets. More in detail, it compares the usefulness of the Daubechies wavelets with different vanishing moments for noise reduction. The work is based upon the discrete wavelet transform (DWT) version of wavelet package transform (WPT). With the help of a seminorm the measurement of noise of a sequence is defined. An algorithm for noise reduction is proposed to detect unavoidable measured noise in topographic surface scans. The denoising wavelet algorithm is used to improve the quality of the scanned images. By taking real measurements in which the measurement and system noise is included, the effectiveness of the proposed denoising algorithm is validated.

[1]  Paolo Mercorelli,et al.  Using a seminorm for wavelet denoising of sEMG signals for monitoring during rehabilitation with embedded orthosis system , 2015, 2015 IEEE International Symposium on Medical Measurements and Applications (MeMeA) Proceedings.

[2]  Nikitas J. Dimopoulos,et al.  Wavelet denoising of coarsely quantized signals , 2006, IEEE Transactions on Instrumentation and Measurement.

[3]  I. Daubechies Ten Lectures on Wavelets , 1992 .

[4]  Shu‐wen W. Chen,et al.  DeStripe: frequency-based algorithm for removing stripe noises from AFM images , 2011, BMC Structural Biology.

[5]  David L. Donoho,et al.  De-noising by soft-thresholding , 1995, IEEE Trans. Inf. Theory.

[6]  S. El-Rabaie,et al.  Utilization of discrete transforms to conquer the problems of multi-tone systems , 2014, J. Frankl. Inst..

[7]  Paolo Mercorelli,et al.  Noise Level Estimation Using Haar Wavelet Packet Trees for Sensor Robust Outlier Detection , 2006, ICCSA.

[8]  Olof Svensson,et al.  The impact of Mexican hat and dual‐tree complex wavelet transforms on multivariate evaluation of image texture properties , 2010 .

[9]  Paolo Mercorelli,et al.  Implemented Wavelet Packet Tree based Denoising Algorithm in Bus Signals of a Wearable Sensorarray , 2015, Journal of Physics: Conference Series.

[10]  Ştefan Ţălu,et al.  Topographic characterization of unworn contact lenses assessed by atomic force microscopy and wavelet transform , 2015, Microscopy research and technique.