An algorithm for automated closure during assembly
暂无分享,去创建一个
[1] C. Desmarais,et al. Automated finishing with autofinish. , 2001, Genome research.
[2] A Danchin,et al. Cloning and assembly strategies in microbial genome projects. , 1999, Microbiology.
[3] Eugene W. Myers,et al. Toward Simplifying and Accurately Formulating Fragment Assembly , 1995, J. Comput. Biol..
[4] P. Green,et al. Consed: a graphical tool for sequence finishing. , 1998, Genome research.
[5] Eugene W. Myers,et al. A whole-genome assembly of Drosophila. , 2000, Science.
[6] S. Salzberg,et al. Versatile and open software for comparing large genomes , 2004, Genome Biology.
[7] Matthew Berriman,et al. Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology , 2010, Bioinform..
[8] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[9] Patrick Chain,et al. Finishing Repetitive Regions Automatically with Dupfinisher , 2006, BIOCOMP.
[10] Victor Markowitz,et al. Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3T) , 2009, Standards in genomic sciences.
[11] BMC Bioinformatics , 2005 .
[12] E. Birney,et al. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. , 2008, Genome research.
[13] Sergey Koren,et al. Aggressive assembly of pyrosequencing reads with mates , 2008, Bioinform..
[14] C. Condon,et al. Comparison of the expression of the seven ribosomal RNA operons in Escherichia coli. , 1992, The EMBO journal.