Controlpproaches for Probabilistic Gene Regulatory Networks

[1]  E. Dougherty,et al.  Gene perturbation and intervention in probabilistic Boolean networks. , 2002, Bioinformatics.

[2]  Xiaobo Zhou,et al.  A Bayesian connectivity-based approach to constructing probabilistic gene regulatory networks , 2004, Bioinform..

[3]  S. Kauffman,et al.  Towards a general theory of adaptive walks on rugged landscapes. , 1987, Journal of theoretical biology.

[4]  Aniruddha Datta,et al.  External Control in Markovian Genetic Regulatory Networks , 2004, Machine Learning.

[5]  C. J. Stone,et al.  Introduction to Stochastic Processes , 1972 .

[6]  A. Datta,et al.  Assignment of terminal penalties in controlling genetic regulatory networks , 2005, Proceedings of the 2005, American Control Conference, 2005..

[7]  E. Dougherty,et al.  Multivariate measurement of gene expression relationships. , 2000, Genomics.

[8]  R E Kalman,et al.  CANONICAL STRUCTURE OF LINEAR DYNAMICAL SYSTEMS. , 1962, Proceedings of the National Academy of Sciences of the United States of America.

[9]  Bruce Alberts,et al.  Essential Cell Biology , 1983 .

[10]  Edward R. Dougherty,et al.  Probabilistic Boolean networks: a rule-based uncertainty model for gene regulatory networks , 2002, Bioinform..

[11]  Aniruddha Datta,et al.  Generating Boolean networks with a prescribed attractor structure , 2005, Bioinform..

[12]  N. Sampas,et al.  Molecular classification of cutaneous malignant melanoma by gene expression profiling , 2000, Nature.

[13]  S. Kauffman.  Metabolic stability and epigenesis in randomly constructed genetic nets. , 1969, Journal of theoretical biology.

[14]  Aniruddha Datta,et al.  External control in Markovian genetic regulatory networks: the imperfect information case , 2004, Bioinform..

[15]  Aniruddha Datta,et al.  Intervention in Probabilistic Gene Regulatory Networks , 2006 .

[16]  Aniruddha Datta,et al.  Optimal infinite horizon control for probabilistic Boolean networks , 2006, 2006 American Control Conference.

[17]  Stuart A. Kauffman,et al.  The origins of order , 1993 .

[18]  Edward R. Dougherty,et al.  From Boolean to probabilistic Boolean networks as models of genetic regulatory networks , 2002, Proc. IEEE.

[19]  R. Bellman.  Dynamic programming. , 1957, Science.

[20]  M. Bittner,et al.  Wnt5a signaling directly affects cell motility and invasion of metastatic melanoma. , 2002, Cancer cell.

[21]  E. Dougherty,et al.  CONTROL OF STATIONARY BEHAVIOR IN PROBABILISTIC BOOLEAN NETWORKS BY MEANS OF STRUCTURAL INTERVENTION , 2002 .

[22]  Aniruddha Datta,et al.  BIOINFORMATICS ORIGINAL PAPER Systems biology Intervention in a family of Boolean networks , 2022 .

[23]  Edward J. Sondik,et al.  The Optimal Control of Partially Observable Markov Processes over a Finite Horizon , 1973, Oper. Res..

[24]  Edward R. Dougherty,et al.  Coefficient of determination in nonlinear signal processing , 2000, Signal Process..