Classify autism and control based on deep learning and community structure on resting-state fMRI

It is unsatisfied to diagnose brain disorders based on subjective judgment. In this paper, we proposed a novel method to classify autism disorders and normal subjects objectively and automatically. The method firstly detects community structure in network of every subject. The NMI statistic matrix, which can effectively represent the features of all subject in a certain dataset, was developed and then was imported into denoising autoencoder to classify. We tested our method on three datasets. The results show that the accuracy of our method is higher than that of traditional one. Additionally, our method is more efficient than import Pearson correlation matrix into classifier. Our method is effective to help doctors diagnose autism objectively.

[1]  M E J Newman,et al.  Modularity and community structure in networks. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[2]  Tetsuya Iidaka,et al.  Resting state functional magnetic resonance imaging and neural network classified autism and control , 2015, Cortex.

[3]  Weixiong Zhang,et al.  Identifying network communities with a high resolution. , 2007, Physical review. E, Statistical, nonlinear, and soft matter physics.

[4]  J. Baio Prevalence of autism spectrum disorders--Autism and Developmental Disabilities Monitoring Network, 14 sites, United States, 2008. , 2012, Morbidity and mortality weekly report. Surveillance summaries.

[5]  Paul J. Laurienti,et al.  Modularity maps reveal community structure in the resting human brain , 2009 .

[6]  Yong He,et al.  Mapping the Alzheimer’s Brain with Connectomics , 2012, Front. Psychiatry.

[7]  Steven C. R. Williams,et al.  Describing the Brain in Autism in Five Dimensions—Magnetic Resonance Imaging-Assisted Diagnosis of Autism Spectrum Disorder Using a Multiparameter Classification Approach , 2010, The Journal of Neuroscience.

[8]  M. P. van den Heuvel,et al.  Normalized Cut Group Clustering of Resting-State fMRI Data , 2008, PloS one.

[9]  Yanlu Wang,et al.  Analysis of Whole-Brain Resting-State fMRI Data Using Hierarchical Clustering Approach , 2013, PloS one.

[10]  Yee Whye Teh,et al.  A Fast Learning Algorithm for Deep Belief Nets , 2006, Neural Computation.

[11]  Quanzheng Li,et al.  Clinical decision support for Alzheimer's disease based on deep learning and brain network , 2016, 2016 IEEE International Conference on Communications (ICC).

[12]  Geoffrey E. Hinton,et al.  Learning representations by back-propagating errors , 1986, Nature.

[13]  D. Amaral,et al.  Neuroanatomy of autism , 2008, Trends in Neurosciences.

[14]  Edward T. Bullmore,et al.  Age-related changes in modular organization of human brain functional networks , 2009, NeuroImage.

[15]  Hiroshi Fukuda,et al.  The Overlapping Community Structure of Structural Brain Network in Young Healthy Individuals , 2011, PloS one.

[16]  B. Biswal,et al.  Functional connectivity in the motor cortex of resting human brain using echo‐planar mri , 1995, Magnetic resonance in medicine.