Meeting report: GenBank microbial genomic taxonomy workshop (12–13 May, 2015)

[1]  Natalia N. Ivanova,et al.  Microbial species delineation using whole genome sequences , 2015, Nucleic acids research.

[2]  Rudolf Amann,et al.  Past and future species definitions for Bacteria and Archaea. , 2015, Systematic and applied microbiology.

[3]  M. Figueras,et al.  Strategies to Avoid Wrongly Labelled Genomes Using as Example the Detected Wrong Taxonomic Affiliation for Aeromonas Genomes in the GenBank Database , 2015, PloS one.

[4]  Scott Federhen,et al.  Type material in the NCBI Taxonomy Database , 2014, Nucleic Acids Res..

[5]  J. Peter Gogarten,et al.  Bioinformatic Genome Comparisons for Taxonomic and Phylogenetic Assignments Using Aeromonas as a Test Case , 2014, mBio.

[6]  Rick Stevens,et al.  Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains , 2014, PLoS biology.

[7]  Bernard De Baets,et al.  StrainInfo introduces electronic passports for microorganisms. , 2014, Systematic and applied microbiology.

[8]  A. Martínez-Murcia,et al.  Reclassification of Aeromonas hydrophila subsp. dhakensis Huys et al. 2002 and Aeromonas aquariorum Martínez-Murcia et al. 2008 as Aeromonas dhakensis sp. nov. comb nov. and emendation of the species Aeromonas hydrophila. , 2013, Systematic and applied microbiology.

[9]  Alexander F. Auch,et al.  Genome sequence-based species delimitation with confidence intervals and improved distance functions , 2013, BMC Bioinformatics.

[10]  H. Klenk,et al.  En route to a genome-based classification of Archaea and Bacteria? , 2010, Systematic and applied microbiology.

[11]  R. Rosselló-Móra,et al.  Shifting the genomic gold standard for the prokaryotic species definition , 2009, Proceedings of the National Academy of Sciences.

[12]  Konstantinos T. Konstantinidis,et al.  Towards a Genome-Based Taxonomy for Prokaryotes , 2005, Journal of bacteriology.

[13]  K. Konstantinidis,et al.  Genomic insights that advance the species definition for prokaryotes. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[14]  R. Amann,et al.  Application of tetranucleotide frequencies for the assignment of genomic fragments. , 2004, Environmental microbiology.

[15]  W. Whitman,et al.  Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology. , 2002, International journal of systematic and evolutionary microbiology.

[16]  Sp Lapage,et al.  International Code of Nomenclature of Bacteria: Bacteriological Code, 1990 Revision , 1992 .

[17]  Pha Sneath,et al.  International code of nomenclature of bacteria (1990 revision). , 1992 .

[18]  Sp Lapage,et al.  International Code of Nomenclature of Bacteria , 1992 .