Variability and heritability of mouse brain structure: Microscopic MRI atlases and connectomes for diverse strains

[1]  Robert W. Williams,et al.  The expanded BXD family of mice: A cohort for experimental systems genetics and precision medicine , 2019, bioRxiv.

[2]  Anders M. Dale,et al.  Predominantly global genetic influences on individual white matter tract microstructure , 2019, NeuroImage.

[3]  G Allan Johnson,et al.  Small Animal Multivariate Brain Analysis (SAMBA) – a High Throughput Pipeline with a Validation Framework , 2018, Neuroinformatics.

[4]  Nicholas Tustison,et al.  Whole mouse brain connectomics , 2018, The Journal of comparative neurology.

[5]  Majid H. Mohajerani,et al.  Non-diagnostic symptoms in a mouse model of autism in relation to neuroanatomy: the BTBR strain reinvestigated , 2018, Translational Psychiatry.

[6]  J. Marchini,et al.  Genome-wide association studies of brain imaging phenotypes in UK Biobank , 2018, Nature.

[7]  G. Johnson,et al.  Whole mouse brain structural connectomics using magnetic resonance histology , 2018, Brain Structure and Function.

[8]  David B. Dunson,et al.  Mapping population-based structural connectomes , 2018, NeuroImage.

[9]  Timothy D. Verstynen,et al.  Population-averaged atlas of the macroscale human structural connectome and its network topology , 2018, NeuroImage.

[10]  Peter F. Neher,et al.  The challenge of mapping the human connectome based on diffusion tractography , 2017, Nature Communications.

[11]  Carey E. Priebe,et al.  A Central Limit Theorem for an Omnibus Embedding of Multiple Random Dot Product Graphs , 2017, 2017 IEEE International Conference on Data Mining Workshops (ICDMW).

[12]  Brigitte L. Kieffer,et al.  Remodeling of Sensorimotor Brain Connectivity in Gpr88-Deficient Mice , 2017, Brain Connect..

[13]  Carey E. Priebe,et al.  A central limit theorem for an omnibus embedding of multiple random graphs and implications for multiscale network inference , 2017 .

[14]  L. F. Abbott,et al.  The complete connectome of a learning and memory centre in an insect brain , 2017, Nature.

[15]  D. C. Blanchard,et al.  The BTBR mouse model of idiopathic autism – Current view on mechanisms , 2017, Neuroscience & Biobehavioral Reviews.

[16]  Michael C Neale,et al.  Heritability of white matter microstructure in late middle age: A twin study of tract‐based fractional anisotropy and absolute diffusivity indices , 2017, Human brain mapping.

[17]  Jürgen Hennig,et al.  The connectomics of brain demyelination: Functional and structural patterns in the cuprizone mouse model , 2017, NeuroImage.

[18]  Erlend S. Dørum,et al.  Human subcortical brain asymmetries in 15,847 people worldwide reveal effects of age and sex , 2016, Brain Imaging and Behavior.

[19]  Alexandra Badea,et al.  Mouse model of rare TOR1A variant found in sporadic focal dystonia impairs domains affected in DYT1 dystonia patients and animal models , 2016, Neurobiology of Disease.

[20]  Robert W. Williams,et al.  Joint mouse–human phenome-wide association to test gene function and disease risk , 2016, Nature Communications.

[21]  P. Thompson,et al.  Multi-Shell Hybrid Diffusion Imaging (HYDI) at 7 Tesla in TgF344-AD Transgenic Alzheimer Rats , 2015, PloS one.

[22]  G. Johnson,et al.  A Diffusion MRI Tractography Connectome of the Mouse Brain and Comparison with Neuronal Tracer Data , 2015, Cerebral cortex.

[23]  Steen Moeller,et al.  Heritability of fractional anisotropy in human white matter: A comparison of Human Connectome Project and ENIGMA-DTI data , 2015, NeuroImage.

[24]  Thomas E. Nichols,et al.  Common genetic variants influence human subcortical brain structures , 2015, Nature.

[25]  Shella D. Keilholz,et al.  A comparative analysis of mouse and human medial geniculate nucleus connectivity: A DTI and anterograde tracing study , 2015, NeuroImage.

[26]  D. Leopold,et al.  Anatomical accuracy of brain connections derived from diffusion MRI tractography is inherently limited , 2014, Proceedings of the National Academy of Sciences.

[27]  Thomas E. Nichols,et al.  Joint genetic analysis of hippocampal size in mouse and human identifies a novel gene linked to neurodegenerative disease , 2014, BMC Genomics.

[28]  Thomas E. Nichols,et al.  The ENIGMA Consortium: large-scale collaborative analyses of neuroimaging and genetic data , 2014, Brain Imaging and Behavior.

[29]  Timothy D. Verstynen,et al.  Deterministic Diffusion Fiber Tracking Improved by Quantitative Anisotropy , 2013, PloS one.

[30]  Paul M. Thompson,et al.  Genetics of the connectome , 2013, NeuroImage.

[31]  Patric Hagmann,et al.  Comparing connectomes across subjects and populations at different scales , 2013, NeuroImage.

[32]  Steen Moeller,et al.  Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project , 2013, NeuroImage.

[33]  R. Mark Henkelman,et al.  Neuroanatomical analysis of the BTBR mouse model of autism using magnetic resonance imaging and diffusion tensor imaging , 2013, NeuroImage.

[34]  Alan Connelly,et al.  Super-resolution track-density imaging studies of mouse brain: Comparison to histology , 2012, NeuroImage.

[35]  Lu Lu,et al.  Genetic architecture supports mosaic brain evolution and independent brain–body size regulation , 2012, Nature Communications.

[36]  Brian B. Avants,et al.  An Open Source Multivariate Framework for n-Tissue Segmentation with Evaluation on Public Data , 2011, Neuroinformatics.

[37]  Douglas M. Bowden,et al.  A symmetrical Waxholm canonical mouse brain for NeuroMaps , 2011, Journal of Neuroscience Methods.

[38]  Arno Klein,et al.  A reproducible evaluation of ANTs similarity metric performance in brain image registration , 2011, NeuroImage.

[39]  G. Allan Johnson,et al.  Waxholm Space: An image-based reference for coordinating mouse brain research , 2010, NeuroImage.

[40]  Yi Jiang,et al.  Microscopic diffusion tensor imaging of the mouse brain , 2010, NeuroImage.

[41]  Fang-Cheng Yeh,et al.  Generalized ${ q}$-Sampling Imaging , 2010, IEEE Transactions on Medical Imaging.

[42]  Brian B. Avants,et al.  The optimal template effect in hippocampus studies of diseased populations , 2010, NeuroImage.

[43]  Anders M. Dale,et al.  Genetic and environmental influences on the size of specific brain regions in midlife: The VETSA MRI study , 2010, NeuroImage.

[44]  Pablo Martínez-Camblor,et al.  Non-parametric k-sample tests: Density functions vs distribution functions , 2009, Comput. Stat. Data Anal..

[45]  G. Allan Johnson,et al.  Genetic dissection of the mouse brain using high-field magnetic resonance microscopy , 2009, NeuroImage.

[46]  G. Allan Johnson,et al.  High-throughput morphologic phenotyping of the mouse brain with magnetic resonance histology , 2007, NeuroImage.

[47]  R. Kahn,et al.  Genetic influences on human brain structure: A review of brain imaging studies in twins , 2007, Human brain mapping.

[48]  Susumu Mori,et al.  Magnetic Resonance Diffusion Tensor Microimaging Reveals a Role for Bcl-x in Brain Development and Homeostasis , 2005, The Journal of Neuroscience.

[49]  R. Williams,et al.  Genetic architecture of the mouse hippocampus: identification of gene loci with selective regional effects , 2003, Genes, brain, and behavior.

[50]  Dana C Peters,et al.  Centering the projection reconstruction trajectory: Reducing gradient delay errors , 2003, Magnetic resonance in medicine.

[51]  Susumu Mori,et al.  Three-Dimensional Diffusion Tensor Magnetic Resonance Microimaging of Adult Mouse Brain and Hippocampus , 2002, NeuroImage.

[52]  Tyrone D. Cannon,et al.  Genetic influences on brain structure , 2001, Nature Neuroscience.

[53]  W. Ewens Genetics and analysis of quantitative traits , 1999 .

[54]  P. Groenen,et al.  Modern Multidimensional Scaling: Theory and Applications , 1999 .

[55]  R. Strom,et al.  Genetic and Environmental Control of Variation in Retinal Ganglion Cell Number in Mice , 1996, The Journal of Neuroscience.

[56]  R. Gorski,et al.  Sex difference in the bed nucleus of the stria terminalis of the human brain , 1990, The Journal of comparative neurology.

[57]  Kai-Uwe Eckardt,et al.  Novel genetic loci associated with hippocampal , 2017 .

[58]  Naomi R. Wray,et al.  Estimating Trait Heritability , 2008 .

[59]  M. Lynch,et al.  Genetics and Analysis of Quantitative Traits , 1996 .

[60]  H. Soleimani,et al.  Submitted: 2011-08-08 Accepted: 2011-11-24 Reducing Interpolation Artifacts for Mutual Information Based Image Registration , 2022 .