A strategy for establishing accurate quantitation standards of oligonucleotides: quantitation of phosphorus of DNA phosphodiester bonds using inductively coupled plasma-optical emission spectroscopy.

[1]  G. Doran Oligonucleotides make sensible strides. , 2004, Drug discovery today.

[2]  P. Iversen,et al.  Qualitative and quantitative measurements of oligonucleotides in gene therapy: Part II in vivo models. , 1997, Journal of pharmaceutical and biomedical analysis.

[3]  W. Halford The essential prerequisites for quantitative RT-PCR , 1999, Nature Biotechnology.

[4]  Lloyd M. Smith,et al.  Oligodeoxynucleotide fragmentation in MALDI/TOF mass spectrometry using 355-nm radiation , 1995 .

[5]  W. Thilly,et al.  Specificity, efficiency, and fidelity of PCR. , 1993, PCR methods and applications.

[6]  T. L. Trapane,et al.  Concentration and extinction coefficient determination for oligonucleotides and analogs using a general phosphate analysis. , 1996, Analytical biochemistry.

[7]  T. Lowe,et al.  General concepts for PCR primer design. , 1993, PCR methods and applications.

[8]  J. Nickerson,et al.  Quantifying DNA concentrations using fluorometry: a comparison of fluorophores. , 2002, Molecular vision.

[9]  A. Woolford,et al.  Quantitation of oligonucleotides by phosphodiesterase digestion followed by isotope dilution mass spectrometry: proof of concept. , 2002, Analytical chemistry.

[10]  P. Borer,et al.  Revised UV extinction coefficients for nucleoside-5'-monophosphates and unpaired DNA and RNA. , 2004, Nucleic acids research.

[11]  D. Whitcombe,et al.  Advances in approaches to DNA-based diagnostics. , 1998, Current opinion in biotechnology.

[12]  R. Georgiadis,et al.  The effect of surface probe density on DNA hybridization. , 2001, Nucleic acids research.

[13]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[14]  Youmin Wang,et al.  Conditions to ensure competitive hybridization in two-color microarray: a theoretical and experimental analysis. , 2002, BioTechniques.

[15]  D. Lide Handbook of Chemistry and Physics , 1992 .

[16]  B. Ward,et al.  A comparison of measured and calculated single- and double-stranded oligodeoxynucleotide extinction coefficients. , 1996, Analytical biochemistry.

[17]  T. A. Butler,et al.  Single-element solution comparisons with a high-performance inductively coupled plasma optical emission spectrometric method. , 2001, Analytical chemistry.

[18]  M. Salit,et al.  A drift correction procedure. , 1998, Analytical chemistry.

[19]  C. Dieffenbach,et al.  PCR primer: a laboratory manual. , 2003 .

[20]  H. Ledebur,et al.  A mammalian artificial chromosome engineering system (ACE System) applicable to biopharmaceutical protein production, transgenesis and gene-based cell therapy. , 2004, Nucleic acids research.

[21]  Allan Cooper,et al.  Oligonucleotide probe design — a new approach , 1994, Nature.

[22]  T. Yip,et al.  Quantitative analysis of oligonucleotides by matrix-assisted laser desorption/ionization mass spectrometry. , 1996, Rapid communications in mass spectrometry : RCM.

[23]  M. Gross,et al.  Matrix-assisted laser desorption/ionization mass spectrometry methods for oligodeoxynucleotides: Improvements in matrix, detection limits, quantification, and sequencing , 2000, Journal of the American Society for Mass Spectrometry.

[24]  D. E. Ruffner,et al.  Modified crush-and-soak method for recovering oligodeoxynucleotides from polyacrylamide gel. , 1996, BioTechniques.

[25]  R. Cotter,et al.  MALDI on a Chip: Analysis of Arrays of Low-Femtomole to Subfemtomole Quantities of Synthetic Oligonucleotides and DNA Diagnostic Products Dispensed by a Piezoelectric Pipet , 1997 .

[26]  Lloyd M. Smith,et al.  High resolution characterization of DNA fragment ions produced by ultraviolet matrix-assisted laser desorption/ionization using linear and reflecting time-of-flight mass spectrometry , 1999 .

[27]  J. Jett,et al.  Characteristics of different nucleic acid staining dyes for DNA fragment sizing by flow cytometry. , 1999, Analytical chemistry.

[28]  E. Chang,et al.  Antisense therapeutics: from theory to clinical practice. , 2003, Pharmacology & therapeutics.