Ontology-Guided Mesh Segmentation

In this paper we present a mesh segmentation technique guided by an a priori knowledge. This knowledge is organized in an ontology. The work is done in an anatomical context, the segmentation aims at identifying different parts of an anatomical organ using their geometric shape. The ontology was extended to include an approximation of the geometric shape of some anatomical parts. The ontology then provides the parameters needed to segment the input mesh corresponding to an organ. The segmentation is then repeated following the hierarchy of the ontology to label the different parts and sub-parts of the starting organ.

[1]  François Faure,et al.  My Corporis Fabrica: A Unified Ontological, Geometrical and Mechanical View of Human Anatomy , 2009, 3DPH.

[2]  Marco Attene,et al.  Hierarchical mesh segmentation based on fitting primitives , 2006, The Visual Computer.

[3]  Atilla Baskurt,et al.  A new CAD mesh segmentation method, based on curvature tensor analysis , 2005, Comput. Aided Des..

[4]  Olivier Dameron Modélisation, représentation et partage de connaissances anatomiques sur le cortex cérébral , 2003 .

[5]  J. Rossignac,et al.  Plumber: a method for a multi-scale decomposition of 3D shapes into tubular primitives and bodies , 2004, SM '04.

[6]  Derek Nowrouzezahrai,et al.  Multi‐objective shape segmentation and labeling , 2009, Comput. Graph. Forum.

[7]  Giuseppe Patanè,et al.  From geometric to semantic human body models , 2006, Comput. Graph..

[8]  Marco Attene,et al.  Characterization of 3D shape parts for semantic annotation , 2009, Comput. Aided Des..

[9]  Marco Attene,et al.  Mesh Segmentation - A Comparative Study , 2006, IEEE International Conference on Shape Modeling and Applications 2006 (SMI'06).

[10]  Pierre Alliez,et al.  Variational shape approximation , 2004, ACM Trans. Graph..

[11]  Guillaume Lavoué,et al.  A framework for the objective evaluation of segmentation algorithms using a ground-truth of human segmented 3D-models , 2009, 2009 IEEE International Conference on Shape Modeling and Applications.

[12]  Dong-Ming Yan,et al.  Quadric Surface Extraction by Variational Shape Approximation , 2006, GMP.

[13]  Ariel Shamir,et al.  A survey on Mesh Segmentation Techniques , 2008, Comput. Graph. Forum.

[14]  Mohamed Daoudi,et al.  Topology driven 3D mesh hierarchical segmentation , 2007, IEEE International Conference on Shape Modeling and Applications 2007 (SMI '07).

[15]  Ayellet Tal,et al.  Mesh Segmentation Refinement , 2009, Comput. Graph. Forum.

[16]  Thomas A. Funkhouser,et al.  A benchmark for 3D mesh segmentation , 2009, ACM Trans. Graph..

[17]  José L. V. Mejino,et al.  A reference ontology for biomedical informatics: the Foundational Model of Anatomy , 2003, J. Biomed. Informatics.

[18]  Michela Spagnuolo,et al.  Semantics-driven best view of 3D shapes , 2009, Comput. Graph..