The Evaluation of Genotype × Environment Interactions of Citrus Leaf Morphology Using Image Analysis and Elliptic Fourier Descriptors

Variations of leaf form, i.e., differences in shape and size, among citrus varieties and the genotype × environment (GE) interactions influencing the variations were examined. Leaf shape was quantitatively measured by the score of the principal components of elliptic Fourier descriptors (EFDs). Leaf size was measured in terms of area and perimeter. The first four principal components of EFDs, which could explain over 90 % of the shape variations, were good measures of the length to width ratio, the position of the center of gravity, the curvature, and the degree of roundness. Nested ANOVA for the leaf form variations in nine citrus varieties indicated that the variations accounted for by the 1st, 2nd and 4th components were inherited. GE interaction of the leaf form was investigated using the data appertaining to seven genotypes from eight locations; the interaction was significant for all the principal components examined except the third. Although the interaction fitted very poorly to a joint linear regression analysis model developed from the data, it was effectively explained by an additive main effect and multiplicative interaction model where the score of the interaction principal component was highly correlated with the stability indices. Our results suggest that the genotype was the main source of variation in leaf shape, but not in size, and that the contribution of GE interaction was minor to both shape and size, although statistically significant at the 1 % probability level.

[1]  William G. Cochran,et al.  The analysis of groups of experiments , 1938, The Journal of Agricultural Science.

[2]  K. W. Finlay,et al.  The analysis of adaptation in a plant-breeding programme , 1963 .

[3]  N. Mantel The detection of disease clustering and a generalized regression approach. , 1967, Cancer research.

[4]  H. Webber,et al.  History, world distribution, botany, and varieties , 1967 .

[5]  T. Tanaka,et al.  Misunderstanding with Regards Citrus Classification and Nomeclature , 1969 .

[6]  Herbert Freeman,et al.  Computer Processing of Line-Drawing Images , 1974, CSUR.

[7]  Charles R. Giardina,et al.  Elliptic Fourier features of a closed contour , 1982, Comput. Graph. Image Process..

[8]  F. Rohlf,et al.  A COMPARISON OF FOURIER METHODS FOR THE DESCRIPTION OF WING SHAPE IN MOSQUITOES (DIPTERA: CULICIDAE) , 1984 .

[9]  S. R. Draper,et al.  The measurement of new characters for cultivar identification in wheat using machine vision , 1986 .

[10]  H. Gauch Model selection and validation for yield trials with interaction , 1988 .

[11]  Honor C. Prentice,et al.  Automated image acquisition and morphometric description , 1988 .

[12]  T. Mclellan,et al.  THE ROLES OF HETEROCHRONY AND HETEROBLASTY IN THE DIVERSIFICATION OF LEAF SHAPES IN BEGONIA DREGEI (BEGONIACEAE) , 1993 .

[13]  Seishi Ninomiya,et al.  Quantitative Evaluation of Soybean (Glycine max L. Merr.) Leaflet Shape by Principal Component Scores Based on Elliptic Fourier Descriptor , 1995 .

[14]  Evaluation of tuber shape of yam (Dioscorea alata L.) cultivars by image analysis and elliptic Fourier descriptors. , 2000 .

[15]  Seiji Matsuura,et al.  Diallel Analysis of Root Shape of Japanese Radish (Raphanus sativus L.) Based on Elliptic Fourier Descriptors , 2000 .

[16]  S. Ninomiya,et al.  Diallel Analysis of Leaf Shape Variations of Citrus Varieties Based on Elliptic Fourier Descriptors. , 2002 .

[17]  Seiji Matsuura,et al.  Evaluation of variation of root shape of Japanese radish (Raphanus sativus L.) based on image analysis using elliptic Fourier descriptors , 1998, Euphytica.

[18]  S. Xu,et al.  Alternative partitioning of the genotype-by-environment interaction , 1992, Theoretical and Applied Genetics.

[19]  Seishi Ninomiya,et al.  Quantitative evaluation of common buckwheat (Fagopyrum esculentum Moench) kernel shape by elliptic Fourier descriptor , 2004, Euphytica.

[20]  Б ВологдінаГ. THE ANALYSIS OF ADAPTATION IN A PLANT-BREEDING PROGRAMME , 2016 .