Flow and image cytometry side by side for the new frontiers in quantitative single‐cell analysis

THE role of regulatory (CD4CD25) T-cells (Tregs) as therapeutics to replace common anti-inflammatory drugs is of increasing interest since cell therapy seems to be within reach (1). Practical aspects of purification and propagation of Tregs is now summarized by Trzonkowski et al. in the present issue (2). The authors demonstrate that novel advances in flow cytometry and also cellular immunology opens the door for the clinical application of Tregs. Affordable diagnostic tools for HIV and AIDS are of imminent importance in resource poor countries (3). To this end, PCR (4) and cell-based analysis (i.e. CD4 counting) by flow cytometry (5,6) or automated microscopic cytometry (7) is often the method of choice. The current PCR assays, however, often fail to detect virus variants that are prevalent in the third world. Thereby, these patients, despite clinical symptoms, may be diagnosed as virus negative and will not receive therapy. Now, Greve et al. present a new microparticle-based PCR assay that enables detection and quantification of HIV-1 viral load for most of the common variants including outlier, nonmajor, and circulating recombinant forms (8, commentary in 9). Malaria is also one of the great killers that needs appropriate diagnostic tools (7). Jimenez-Diaz et al. (10) developed an assay to quantify malaria-infected erythrocytes using the cell-permeable nuclear dye SYTO-16. The authors show the applicability of their assay for infected normal mice and human erythrocyte engrafted NOD mice. Because flow cytometers are now available in many resource poor settings, both assays can be introduced, relatively inexpensively. Finally, the research group of Edwards et al. applied a flow-cytometry-based high-throughput screening system (11) to identify novel formylpeptide receptor ligand probes. The authors screened more than 24,000 small molecules and finally came up with several candidates of potential future therapeutic or diagnostic interest (12,13). The aforementioned scientific articles of this issue illustrate that flow cytometry is still going strong with innovative technologies for versatile applications presented in our journal. However, every scientific journal has to evolve and adjust its focus to present and adjust for future requirements of the scientific community. In view of the increasing technological advances in imaging (14), our goal was to become a front journal for image cytometry and quantitative image analysis. As one can see from the citations in 2008 to Cytometry Part A, the readers find an increasing appreciation in our publications in the technological field of quantitative imaging. As one good example, Abella et al. (15) present an assay for automated quantification of cell infiltrates in histological sections based on microscopic images from allergic murine models. After extraction of texture parameters by a stepwise procedure the authors propose an algorithm that appears to be superior to manual cell counting. Yet another application is automated laser scanning cytometry (LSC) for mast cells tracking in skin as described by Zoog et al. (16). Rapid, accurate evaluation of mast cells present around wounds in a wound-healing model by automated LSC may serve as an important tool for tracking pharmacodynamic effects of MC-directed therapies. Without doubt we enter the era of automated cell detection in tissues (17). New labeling fluorescent tools for life-cell in vivo imaging are introduced by Robers et al. (18). High-affinity and selective ligand–receptor binding of 50-fluorescein-tagged synthetic ligand for FKBP12 (immunophilin) and mutated receptor

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[2]  H. Shapiro,et al.  Killer applications: Toward affordable rapid cell‐based diagnostics for malaria and tuberculosis , 2008, Cytometry. Part B, Clinical cytometry.

[3]  J. Dynlacht,et al.  A tool for enhancement and scoring of DNA repair foci , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[4]  E Meijering,et al.  Design and validation of a tool for neurite tracing and analysis in fluorescence microscopy images , 2004, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[5]  D. Robinson,et al.  Regulatory T cells in human disease and their potential for therapeutic manipulation , 2006, Immunology.

[6]  Michael Z. Lin,et al.  Improving the photostability of bright monomeric orange and red fluorescent proteins , 2008, Nature Methods.

[7]  Susan M. Young,et al.  A novel fluorescent cross‐reactive formylpeptide receptor/formylpeptide receptor‐like 1 hexapeptide ligand , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[8]  G. Valet Cytomics, the human cytome project and systems biology: top‐down resolution of the molecular biocomplexity of organisms by single cell analysis , 2005, Cell proliferation.

[9]  K. Gee,et al.  Fluorescent labeling of proteins in living cells using the FKBP12 (F36V) tag , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[10]  Burkhard Greve,et al.  A new affordable flow cytometry based method to measure HIV‐1 viral load , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[11]  Vladislav V Verkhusha,et al.  Monomeric fluorescent timers that change color from blue to red report on cellular trafficking. , 2009, Nature chemical biology.

[12]  Ting Zhao,et al.  Automated learning of generative models for subcellular location: Building blocks for systems biology , 2007, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[13]  Gérard Lizard,et al.  Diagnosing HIV infection using flow cytometry: From antigenic analyses to a specifically dedicated bead‐based assay to measure viral load , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[14]  M. Jiménez-Díaz,et al.  Quantitative measurement of Plasmodium‐infected erythrocytes in murine models of malaria by flow cytometry using bidimensional assessment of SYTO‐16 fluorescence , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[15]  Z. Darżynkiewicz,et al.  Cytometry of ATM activation and histone H2AX phosphorylation to estimate extent of DNA damage induced by exogenous agents , 2007, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[16]  Yoko Shimada,et al.  Challenges in implementing CD4 testing in resource‐limited settings , 2008, Cytometry. Part B, Clinical cytometry.

[17]  J. Paul Robinson,et al.  Subject classification obtained by cluster analysis and principal component analysis applied to flow cytometric data , 2007, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[18]  D. Krull,et al.  Applications of Laser Scanning Cytometry in Immunohistochemistry and Routine Histopathology , 2008, Toxicologic pathology.

[19]  Z. Darżynkiewicz,et al.  Cytometric assessment of DNA damage by exogenous and endogenous oxidants reports aging‐related processes , 2007, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[20]  Manuel Desco,et al.  Automatic quantification of histological studies in allergic asthma , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[21]  J. Ferbas,et al.  Antagonists of CD117 (cKit) signaling inhibit mast cell accumulation in healing skin wounds , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[22]  J. Myśliwska,et al.  Ex vivo expansion of CD4+CD25+ T regulatory cells for immunosuppressive therapy , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[23]  Tudor I. Oprea,et al.  Duplex high‐throughput flow cytometry screen identifies two novel formylpeptide receptor family probes , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[24]  C. Slomianny,et al.  Active caspases‐8 and −3 in circulating human erythrocytes purified on immobilized annexin‐V: A cytometric demonstration , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[25]  K. Chi Super-resolution microscopy: breaking the limits , 2008, Nature Methods.

[26]  Bruce S Edwards,et al.  High‐throughput flow cytometry: Validation in microvolume bioassays , 2003, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[27]  A. Tárnok,et al.  A lifelong dedication to cytometry ‐ A tribute to Guenter Valet , 2007, Cytometry. Part A : the journal of the International Society for Analytical Cytology.